FFCP PHASE1:Hg19::chr3:169490562..169490605,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:169490562..169490605,+ to FFCP PHASE1:Hg19::chr3:169490562..169490605,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55892 | |EntrezGene=55892 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14955 | |HGNC=14955 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPC7,B2R6C9 | |UniProt=Q9NPC7,B2R6C9 | ||
|association_with_transcript=-247bp_to_ENST00000349841,ENST00000356716,ENST00000392733,NM_001185118,NM_018657,NR_033702,NR_033703,uc003fft.2,uc003ffu.2,uc003ffv.2,uc011bpm.1_5end | |||
|cluster_id=chr3:169490562..169490605,+ | |||
|description=CAGE_peak_2_at_MYNN_5end | |||
|id=chr3:169490562..169490605,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.14e-07!235;DOID:14566!3.39e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,6.02e-07,235;DOID:14566,8.53e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.01e-15!94;UBERON:0001016!9.01e-15!94;UBERON:0001017!7.46e-14!82;UBERON:0005743!1.17e-13!86;UBERON:0002780!8.34e-12!41;UBERON:0001890!8.34e-12!41;UBERON:0006240!8.34e-12!41;UBERON:0000955!1.77e-11!69;UBERON:0006238!1.77e-11!69;UBERON:0001869!2.58e-11!32;UBERON:0003080!5.08e-11!42;UBERON:0001893!1.76e-10!34;UBERON:0002619!1.83e-10!22;UBERON:0002616!3.74e-10!59;UBERON:0002791!6.02e-10!33;UBERON:0001049!7.56e-10!57;UBERON:0005068!7.56e-10!57;UBERON:0006241!7.56e-10!57;UBERON:0007135!7.56e-10!57;UBERON:0000956!9.01e-10!25;UBERON:0000203!9.01e-10!25;UBERON:0002020!1.34e-09!34;UBERON:0003528!1.34e-09!34;UBERON:0000924!1.65e-09!173;UBERON:0006601!1.65e-09!173;UBERON:0001950!2.03e-09!20;UBERON:0002346!2.64e-09!90;UBERON:0004121!5.30e-09!169;UBERON:0003075!9.13e-09!86;UBERON:0007284!9.13e-09!86;UBERON:0003056!4.11e-08!61;UBERON:0000033!3.94e-07!123;UBERON:0000153!5.39e-07!129;UBERON:0007811!5.39e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.06e-10;22!UBERON:0001869;4.17e-10;32!UBERON:0000956;9.43e-10;25!UBERON:0000203;9.43e-10;25!UBERON:0001893;1.19e-09;34!UBERON:0002791;3.15e-09;32!UBERON:0001950;3.18e-09;20!UBERON:0002780;6.52e-09;41!UBERON:0001890;6.52e-09;41!UBERON:0003528;9.32e-09;34!UBERON:0002020;9.32e-09;34!UBERON:0000073;4.03e-07;53!UBERON:0002616;4.03e-07;53!UBERON:0001017;5.37e-07;75!UBERON:0000955;6.13e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.18e-16,89;UBERON:0001017,1.44e-14,81;UBERON:0000955,3.71e-12,68;UBERON:0006238,3.71e-12,68;UBERON:0002780,6.77e-12,41;UBERON:0001890,6.77e-12,41;UBERON:0003080,6.77e-12,41;UBERON:0006240,6.77e-12,41;UBERON:0001869,2.11e-11,32;UBERON:0000073,1.19e-10,53;UBERON:0002616,1.19e-10,53;UBERON:0001893,1.47e-10,34;UBERON:0002619,1.53e-10,22;UBERON:0001049,1.59e-10,56;UBERON:0005068,1.59e-10,56;UBERON:0006241,1.59e-10,56;UBERON:0007135,1.59e-10,56;UBERON:0002791,3.27e-10,32;UBERON:0000956,7.63e-10,25;UBERON:0000203,7.63e-10,25;UBERON:0003528,1.14e-09,34;UBERON:0002020,1.14e-09,34;UBERON:0001950,1.73e-09,20;UBERON:0004121,5.41e-09,171;UBERON:0000924,5.41e-09,171;UBERON:0006601,5.41e-09,171;UBERON:0003056,1.60e-08,61;UBERON:0002346,3.73e-08,86;UBERON:0003075,1.25e-07,82;UBERON:0007284,1.25e-07,82;UBERON:0010371,1.77e-07,104 | |||
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| ||
|short_description=p2@MYNN | |||
}} | }} |
Latest revision as of 14:54, 16 September 2015
Short description: | p2@MYNN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYNN_5end |
Coexpression cluster: | NA |
Association with transcript: | -247bp_to_ENST00000349841, ENST00000356716, ENST00000392733, NM_001185118, NM_018657, NR_033702, NR_033703, uc003fft.2, uc003ffu.2, uc003ffv.2, uc011bpm.1_5end |
EntrezGene: | MYNN |
HGNC: | 14955 |
UniProt: | Q9NPC7B2R6C9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 9.18e-16 | 89 |
central nervous system | 1.44e-14 | 81 |
brain | 3.71e-12 | 68 |
future brain | 3.71e-12 | 68 |
regional part of forebrain | 6.77e-12 | 41 |
forebrain | 6.77e-12 | 41 |
anterior neural tube | 6.77e-12 | 41 |
future forebrain | 6.77e-12 | 41 |
cerebral hemisphere | 2.11e-11 | 32 |
regional part of nervous system | 1.19e-10 | 53 |
regional part of brain | 1.19e-10 | 53 |
telencephalon | 1.47e-10 | 34 |
regional part of cerebral cortex | 1.53e-10 | 22 |
neural tube | 1.59e-10 | 56 |
neural rod | 1.59e-10 | 56 |
future spinal cord | 1.59e-10 | 56 |
neural keel | 1.59e-10 | 56 |
regional part of telencephalon | 3.27e-10 | 32 |
cerebral cortex | 7.63e-10 | 25 |
pallium | 7.63e-10 | 25 |
brain grey matter | 1.14e-09 | 34 |
gray matter | 1.14e-09 | 34 |
neocortex | 1.73e-09 | 20 |
ectoderm-derived structure | 5.41e-09 | 171 |
ectoderm | 5.41e-09 | 171 |
presumptive ectoderm | 5.41e-09 | 171 |
pre-chordal neural plate | 1.60e-08 | 61 |
neurectoderm | 3.73e-08 | 86 |
neural plate | 1.25e-07 | 82 |
presumptive neural plate | 1.25e-07 | 82 |
ecto-epithelium | 1.77e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
cancer | 6.02e-07 | 235 |
disease of cellular proliferation | 8.53e-07 | 239 |