FFCP PHASE1:Hg19::chr5:137071689..137071709,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:137071689..137071709,- to FFCP PHASE1:Hg19::chr5:137071689..137071709,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26249 | |EntrezGene=26249 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6354 | |HGNC=6354 | ||
|TSSclassifier=strong | |||
|UniProt=D6RH21 | |UniProt=D6RH21 | ||
|association_with_transcript=0bp_to_ENST00000505853_5end | |||
|cluster_id=chr5:137071689..137071709,- | |||
|description=CAGE_peak_4_at_KLHL3_5end | |||
|id=chr5:137071689..137071709,- | |||
|ontology_enrichment_celltype=CL:0002139!7.42e-16!24;CL:0000071!8.78e-14!18;CL:0002546!8.78e-14!18;CL:0000115!2.82e-09!35;CL:0000791!1.42e-07!18;CL:0000789!1.42e-07!18;CL:0002420!1.42e-07!18;CL:0002419!1.42e-07!18;CL:0000790!1.42e-07!18;CL:1000413!6.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000071;9.71e-22;18!CL:0002139;5.89e-18;24!CL:0002543;6.02e-11;6!CL:0002144;1.29e-08;3!CL:0000115;5.35e-08;36!CL:0002322;7.10e-08;5!CL:1000413;5.21e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,8.88e-22,18;CL:0002546,8.88e-22,18;CL:0002139,5.85e-18,24;CL:0002543,2.66e-11,6;CL:0000115,8.80e-11,36;CL:0002144,2.16e-08,3;CL:0002322,3.71e-08,5;CL:0002078,5.89e-08,45;CL:0000624,4.70e-07,6;CL:1000413,6.23e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;9.71e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.48e-20!115;UBERON:0000025!1.03e-15!194;UBERON:0004111!1.04e-15!241;UBERON:0001986!8.78e-14!18;UBERON:0004638!8.78e-14!18;UBERON:0004852!8.78e-14!18;UBERON:0000477!2.46e-11!286;UBERON:0000483!3.79e-11!309;UBERON:0000119!6.58e-11!312;UBERON:0001049!6.90e-10!57;UBERON:0005068!6.90e-10!57;UBERON:0006241!6.90e-10!57;UBERON:0007135!6.90e-10!57;UBERON:0000487!7.93e-10!22;UBERON:0003075!6.57e-09!86;UBERON:0007284!6.57e-09!86;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0002346!1.30e-08!90;UBERON:0003080!2.79e-08!42;UBERON:0001893!6.57e-08!34;UBERON:0002616!6.73e-08!59;UBERON:0002020!6.82e-08!34;UBERON:0003528!6.82e-08!34;UBERON:0006914!9.02e-08!25;UBERON:0001869!1.09e-07!32;UBERON:0002791!1.92e-07!33;UBERON:0001950!2.76e-07!20;UBERON:0002619!3.16e-07!22;UBERON:0000956!5.12e-07!25;UBERON:0000203!5.12e-07!25;UBERON:0003915!6.28e-07!9;UBERON:0004700!6.28e-07!9;UBERON:0001917!6.28e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.71e-22;18!UBERON:0001986;9.71e-22;18!UBERON:0004852;9.71e-22;18!UBERON:0000487;3.61e-17;22!UBERON:0002619;5.55e-15;22!UBERON:0006914;1.04e-14;25!UBERON:0001950;3.68e-14;20!UBERON:0000956;6.80e-13;25!UBERON:0000203;6.80e-13;25!UBERON:0000490;3.87e-10;33!UBERON:0001869;8.40e-09;32!UBERON:0002791;8.78e-09;32!UBERON:0010523;1.29e-08;3!UBERON:0001915;1.29e-08;3!UBERON:0001982;1.29e-08;3!UBERON:0002021;3.44e-08;5!UBERON:0001893;4.99e-08;34!UBERON:0001638;3.82e-07;9!UBERON:0003920;3.82e-07;9!UBERON:0004582;3.82e-07;9!UBERON:0003528;3.90e-07;34!UBERON:0002020;3.90e-07;34!UBERON:0003915;5.21e-07;9!UBERON:0004700;5.21e-07;9!UBERON:0001917;5.21e-07;9!UBERON:0002780;5.98e-07;41!UBERON:0001890;5.98e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,8.88e-22,18;UBERON:0001986,8.88e-22,18;UBERON:0004852,8.88e-22,18;UBERON:0000487,3.35e-17,22;UBERON:0006914,9.76e-15,25;UBERON:0002619,2.02e-14,22;UBERON:0001950,1.02e-13,20;UBERON:0000956,2.09e-12,25;UBERON:0000203,2.09e-12,25;UBERON:0007023,4.42e-11,114;UBERON:0000025,3.28e-10,192;UBERON:0002791,3.74e-09,32;UBERON:0001869,3.74e-09,32;UBERON:0003528,1.81e-08,34;UBERON:0002020,1.81e-08,34;UBERON:0001893,1.81e-08,34;UBERON:0010523,2.16e-08,3;UBERON:0001915,2.16e-08,3;UBERON:0001982,2.16e-08,3;UBERON:0002780,6.60e-08,41;UBERON:0001890,6.60e-08,41;UBERON:0003080,6.60e-08,41;UBERON:0006240,6.60e-08,41;UBERON:0002021,7.49e-08,5;UBERON:0000073,1.19e-07,53;UBERON:0002616,1.19e-07,53;UBERON:0001017,1.34e-07,81;UBERON:0004111,2.03e-07,240;UBERON:0001638,2.27e-07,9;UBERON:0003920,2.27e-07,9;UBERON:0004582,2.27e-07,9;UBERON:0004872,2.62e-07,83;UBERON:0007500,3.31e-07,59;UBERON:0001981,3.31e-07,59;UBERON:0004537,3.31e-07,59;UBERON:0006965,3.31e-07,59;UBERON:0001049,4.65e-07,56;UBERON:0005068,4.65e-07,56;UBERON:0006241,4.65e-07,56;UBERON:0007135,4.65e-07,56;UBERON:0003915,6.23e-07,9;UBERON:0004700,6.23e-07,9;UBERON:0001917,6.23e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0.313454721478088,0,0.273748850145768,0.251085279189606,0.0764134057479513,0.164201178899891,0.236132343941038,0.786728553697808,0.383829398097213,0.309632246632152,0.919421224478927,0.6024118375565,0,0,0,0.587200878669695,0,0,0,0.223915474239924,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,1.57367816091066,0,1.64481199199607,0.668745981562712,1.95553359980154,0.473447805734733,1.94826728407911,0.557052284425868,1.47302953737419,0.664601683750863,1.35401931882508,0.384273959177026,0.390178042679635,0.493313713811028,0.829050053357545,0.869409257205157,0.741432815810302,0.267540828089713,2.09071047609954,0.339928028092699,0.766440987203842,0.68725489096526,0.253019692019503,2.54852331459277,0.651083453856419,0,1.20460095262218,0.895906278080929,2.49861453104692,0.947109008176067,0.821127996921047,0.604820229674197,0.267440195783507,0.724122019413995,2.43806866313962,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0,0.189069634328136,0,0.175669571386252,0.982343066232845,0.364295288292542,0.370784442784429,0,0,0.132957960518865,0,0,0,1.19257444420023,0.860234595106124,1.73570250803797,4.52246353539208,3.77549492588915,1.10047216776027,0.626984899610432,0.516833518338658,0.71153252537342,1.33888245105868,2.01414658554573,2.28081631715554,1.22031028774085,0.367663080345869,0.81014194788176,1.69669483739752,2.46982309888787,0.788280363383256,3.06633274931766,2.84779697870439,1.46561395144326,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0.560677600142307,0,0.49333509683432,3.42332138939743,0.538842688278752,0.490385709340376,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0.860413786167011,1.34171076742555,1.85541675650079,1.39432731443422,1.55491582523056,0.756962552626885,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.100528972411631,0.370353780634118,0,0,0,0.463721619900307,0,0.721832238805369,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.335964256397719,0.283550194484773,0.179117045405697,0.581267877027924,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.431255149719035,0.641715181398742,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,1.50473049863859,2.27407504055985,0,0,0.184369168541703,0,0,0,0.413536052245775,1.2942852049117,0.533637789017222,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0.802025881213139,0,0.114814448164607,0,0,0,0.385076685522074,0.784349769176855,1.46139224653261,0.105551628892876,0,0.170093705276516,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0.650060246036521,0,0.096670718292122,0.154048617114644,0,0,0,0.290033387828457,0,0,0.165284915360978,0,1.40373983744043,0,0,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,0,0,0,0,0,0.42793898803392,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.608731130888112,0,0.281695602532241,0.430234056612155,0,0,0,0,0,0,0,0.384888450902048,0,0,0.376575203107117,0.86101074534246,0,0.443430153536676,0.689170200620878,0,0,0,0.714695326373367,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0.242721043499027,0.111443384277478,0,0,0,0,0,1.1253553312841,0.111308705022906,0,0.844501632511974,0.996239941255349,0.276283915531148,0.755798243562828,0.102268682502155,0,0,0.718946809178615,0.179021174675609,0,0.295930216910801,0,0,0,0.74214478529481,0,0,0,0,0.796554137998498,0,0,0.344743373241465,0,0,0,0.482385754501632,0,7.1876518955296,1.77328571372128,1.09692698576986,0,0,1.61595542857974,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489698424477443,0.706765357169704,0,0.995261931078505,0.707660516026713,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0.586993856796269,0,0.394584402849391,0,0,1.51647791108371,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.873633341210151,0,0,0,0,0.775912131907355,0,0.90392296312213,0,0,1.45614830698521,0.195551382734803,0,2.13452994739353,0,0.864542502924636,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,1.67569440763353,0.229160424011684,1.43574604915363,0.998395002494955,0.429226048136571,1.11585728720936,1.20930250476107,0,0,0,0,0,0.196854963029498,0.0846733320657845,0,1.0896272488926,1.44677833618517,2.06309154895851,2.07720169014593,0,0,1.09349201984444,0,0.788057072991982,1.41627387964495,0,0.35857467866569,0,3.57347663186684,0.662091970365432,0,0,0,0,0,0,1.02232813071253,0.113312091520126,0.146552233678082,1.32506888912221,0.775697738169303,0.26446520348538,0,0.704815022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| ||
|short_description=p4@KLHL3 | |||
}} | }} |
Latest revision as of 20:56, 24 September 2015
Short description: | p4@KLHL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLHL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000505853_5end |
EntrezGene: | KLHL3 |
HGNC: | 6354 |
UniProt: | D6RH21 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 8.88e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.88e-22 | 18 |
endothelial cell of vascular tree | 5.85e-18 | 24 |
vein endothelial cell | 2.66e-11 | 6 |
endothelial cell | 8.80e-11 | 36 |
capillary endothelial cell | 2.16e-08 | 3 |
embryonic stem cell | 3.71e-08 | 5 |
meso-epithelial cell | 5.89e-08 | 45 |
CD4-positive, alpha-beta T cell | 4.70e-07 | 6 |
endothelial cell of artery | 6.23e-07 | 9 |