FFCP PHASE1:Hg19::chr5:156693351..156693391,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:156693351..156693391,+ to FFCP PHASE1:Hg19::chr5:156693351..156693391,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26999 | |EntrezGene=26999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13760 | |HGNC=13760 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVF4,Q96F07 | |UniProt=E7EVF4,Q96F07 | ||
|association_with_transcript=164bp_to_ENST00000347377,NM_001037332,uc003lwr.2_5end | |||
|cluster_id=chr5:156693351..156693391,+ | |||
|description=CAGE_peak_5_at_CYFIP2_5end | |||
|id=chr5:156693351..156693391,+ | |||
|ontology_enrichment_celltype=CL:0000542!3.80e-09!53;CL:0000051!3.80e-09!53;CL:0000838!8.67e-09!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.29e-20!86;UBERON:0002346!3.19e-19!90;UBERON:0003075!3.32e-19!86;UBERON:0007284!3.32e-19!86;UBERON:0001017!3.47e-19!82;UBERON:0000073!4.15e-19!94;UBERON:0001016!4.15e-19!94;UBERON:0001049!1.80e-18!57;UBERON:0005068!1.80e-18!57;UBERON:0006241!1.80e-18!57;UBERON:0007135!1.80e-18!57;UBERON:0000955!5.21e-17!69;UBERON:0006238!5.21e-17!69;UBERON:0003056!1.58e-16!61;UBERON:0002780!1.66e-16!41;UBERON:0001890!1.66e-16!41;UBERON:0006240!1.66e-16!41;UBERON:0002616!1.78e-16!59;UBERON:0003080!9.69e-16!42;UBERON:0001893!4.15e-14!34;UBERON:0002020!7.75e-14!34;UBERON:0003528!7.75e-14!34;UBERON:0001869!1.18e-13!32;UBERON:0007023!1.75e-13!115;UBERON:0002791!2.14e-13!33;UBERON:0000956!2.88e-11!25;UBERON:0000203!2.88e-11!25;UBERON:0002619!8.94e-11!22;UBERON:0001950!1.07e-09!20;UBERON:0000153!6.79e-09!129;UBERON:0007811!6.79e-09!129;UBERON:0000033!1.46e-08!123;UBERON:0000924!3.54e-07!173;UBERON:0006601!3.54e-07!173;UBERON:0004121!5.74e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.05e-13;22!UBERON:0001869;9.77e-13;32!UBERON:0001950;3.51e-12;20!UBERON:0001893;4.75e-12;34!UBERON:0000956;3.39e-11;25!UBERON:0000203;3.39e-11;25!UBERON:0003528;5.29e-11;34!UBERON:0002020;5.29e-11;34!UBERON:0002791;8.04e-11;32!UBERON:0002780;3.29e-10;41!UBERON:0001890;3.29e-10;41!UBERON:0001905;6.60e-07;2!UBERON:0002757;6.60e-07;2!UBERON:0010134;6.60e-07;2!UBERON:0005408;6.60e-07;2!UBERON:0001899;6.60e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.32e-13,32;UBERON:0002780,2.24e-13,41;UBERON:0001890,2.24e-13,41;UBERON:0003080,2.24e-13,41;UBERON:0006240,2.24e-13,41;UBERON:0002619,6.06e-13,22;UBERON:0001049,1.04e-12,56;UBERON:0005068,1.04e-12,56;UBERON:0006241,1.04e-12,56;UBERON:0007135,1.04e-12,56;UBERON:0001893,1.30e-12,34;UBERON:0003528,1.64e-12,34;UBERON:0002020,1.64e-12,34;UBERON:0000073,3.68e-12,53;UBERON:0002616,3.68e-12,53;UBERON:0001950,4.04e-12,20;UBERON:0002791,1.24e-11,32;UBERON:0001017,2.07e-11,81;UBERON:0003056,3.89e-11,61;UBERON:0000956,3.96e-11,25;UBERON:0000203,3.96e-11,25;UBERON:0000955,1.23e-10,68;UBERON:0006238,1.23e-10,68;UBERON:0003075,4.95e-10,82;UBERON:0007284,4.95e-10,82;UBERON:0001016,1.08e-09,89;UBERON:0002346,2.62e-09,86;UBERON:0007023,3.44e-09,114;UBERON:0001905,6.79e-07,2;UBERON:0002757,6.79e-07,2;UBERON:0010134,6.79e-07,2;UBERON:0005408,6.79e-07,2;UBERON:0001899,6.79e-07,2;UBERON:0010371,8.90e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0.492484232307152,0,0.313454721478088,0.85870796139317,0.273748850145768,0.125542639594803,0.458480434487708,0.410502947249729,0.236132343941038,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,1.31694240986513,2.55904618477359,1.17440175733939,0,0,0,0,0.647787332037959,0,0.290796477559129,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0.217188844705117,0,0,0,0,0.425208599930087,0.209658645508376,0,0.150176892841506,0.16072558669708,0.855038231223746,0.59675003159727,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0,0,0,2.86216126360609,0.569212969109448,0.587237189370939,0.382273228125229,3.96513985737078,1.12101712596307,1.31692042387539,0.393419540227666,0.393010762749165,0.616804496998528,1.5046784585161,0,0,0,0.668462741311041,0.883817722424512,0.221533894583621,0.270803863765016,1.15282187753108,0.520237390239513,1.80881695064044,0.829050053357545,1.15921234294021,0.296573126324121,0.267540828089713,1.04535523804977,0.566546713487831,0,0.34362744548263,0.759059076058509,0.637130828648193,0,0,0.451725357233318,1.15187950038977,0,0.236777252044017,0,1.61285394579786,0,0.579297615531196,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,1.14185221401064,1.11332214173056,0,0,0,0,0,1.66943437013739,0.571994910780128,0,0,0,0,0,0.419499436209906,1.10047216776027,0,0.775250277507987,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0,0,0,0,0.549605231791222,3.9534125230819,0,0,0,0,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0.265059536642971,0.464775771478074,0.725627385107593,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,1.15930404975077,1.76113041353732,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0.492663237895943,0.968532774145487,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0.87192013766656,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,3.25046917581229,1.37921532141349,0.862510299438069,1.41177339907723,1.77866236955724,0,0.773288812777695,0.335032530668698,0,3.74503511973591,0,1.24324654030811,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0.391602314925481,0.343143423810856,1.03384013061444,0.647142602455851,1.06727557803444,0,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0.170093705276516,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0.512900250232778,0.984043937099117,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.282431402330337,0,0,0,0,0,3.0585488285695,0.569647187174163,0,0.411362273086194,0,0,0.79312517629427,0.854592569019785,0.962479855263359,0,0.743212700502875,1.00988449083511,1.06712765022621,0.797131363644112,0.199579371432817,1.34053759092657,0.635020748171649,0,6.45833509660955,1.14117339516596,0.94007937463814,0,2.37008488922245,0,0,0,1.37402137902306,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,3.3307196799782,0,0,0,0.242721043499027,0.222886768554957,0.852408440419239,0,0,0,0,1.1253553312841,0,0.988823245360557,0.211125408127993,0,0.828851746593443,0.755798243562828,0.20453736500431,0.861593638227486,0,0,0,0,0,0,0,3.87733098438087,1.57705766875147,0,0.520855522170466,0.174919999992391,0,0,0,0.472775363535873,0.689486746482929,0,0.173624994933292,2.65722415744152,0.482385754501632,0,0.774054819518572,1.47773809476774,1.97446857438575,0.10893846351899,0,0.0769502585037971,0,1.38338342632836,0.987334088507493,0.325942115766024,0.638002319463839,0.0915975934018623,0,2.04386596391473,0.470940769185074,0,0,0,0,0,0.317873157960757,0.210998064528027,0,0,0,0,0.176915129006678,0,1.48260564340311,0.988511511572023,0.626531697032732,0.876214728748802,0,0.468528891450678,0.729819156862664,0.19566461893209,0,0,0,0.91821828489147,0,2.25485129121739,0.933193722575224,0,0,0,0,0,0,0.520679215005393,0,0,0.17472666824203,1.0319161948297,0,0,0,0,0.441280633457501,0.90392296312213,0.822251547880505,0,2.21587785845575,0,0,0,0,0.288180834308212,0.80175617316141,0,0,0.49701014226173,0,0.135904206073614,0.104602846312333,0,0,0.600420288709789,0,2.55493176133945,0,0,0.558564802544508,0.458320848023367,0.717873024576814,0.399358000997982,1.28767814440971,1.56220020209311,5.84496210634518,0,0,0.709048640765013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| 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| ||
|short_description=p5@CYFIP2 | |||
}} | }} |
Latest revision as of 13:39, 16 September 2015
Short description: | p5@CYFIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CYFIP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 164bp_to_ENST00000347377, NM_001037332, uc003lwr.2_5end |
EntrezGene: | CYFIP2 |
HGNC: | 13760 |
UniProt: | E7EVF4Q96F07 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 1.32e-13 | 32 |
regional part of forebrain | 2.24e-13 | 41 |
forebrain | 2.24e-13 | 41 |
anterior neural tube | 2.24e-13 | 41 |
future forebrain | 2.24e-13 | 41 |
regional part of cerebral cortex | 6.06e-13 | 22 |
neural tube | 1.04e-12 | 56 |
neural rod | 1.04e-12 | 56 |
future spinal cord | 1.04e-12 | 56 |
neural keel | 1.04e-12 | 56 |
telencephalon | 1.30e-12 | 34 |
brain grey matter | 1.64e-12 | 34 |
gray matter | 1.64e-12 | 34 |
regional part of nervous system | 3.68e-12 | 53 |
regional part of brain | 3.68e-12 | 53 |
neocortex | 4.04e-12 | 20 |
regional part of telencephalon | 1.24e-11 | 32 |
central nervous system | 2.07e-11 | 81 |
pre-chordal neural plate | 3.89e-11 | 61 |
cerebral cortex | 3.96e-11 | 25 |
pallium | 3.96e-11 | 25 |
brain | 1.23e-10 | 68 |
future brain | 1.23e-10 | 68 |
neural plate | 4.95e-10 | 82 |
presumptive neural plate | 4.95e-10 | 82 |
nervous system | 1.08e-09 | 89 |
neurectoderm | 2.62e-09 | 86 |
adult organism | 3.44e-09 | 114 |
pineal body | 6.79e-07 | 2 |
regional part of epithalamus | 6.79e-07 | 2 |
secretory circumventricular organ | 6.79e-07 | 2 |
circumventricular organ | 6.79e-07 | 2 |
epithalamus | 6.79e-07 | 2 |
ecto-epithelium | 8.90e-07 | 104 |