FFCP PHASE1:Hg19::chr6:110501200..110501235,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:110501200..110501235,- to FFCP PHASE1:Hg19::chr6:110501200..110501235,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8936 | |EntrezGene=8936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12732 | |HGNC=12732 | ||
|TSSclassifier=strong | |||
|UniProt=Q92558,Q5SZK3,Q5SZK5 | |UniProt=Q92558,Q5SZK3,Q5SZK5 | ||
|association_with_transcript=0bp_to_ENST00000359451,ENST00000392586,ENST00000392588,ENST00000392589,ENST00000419252,NM_001024934,NM_001024935,NM_001024936,NM_003931,uc003ptv.1,uc003ptw.1,uc003ptx.1,uc003pty.1,uc003ptz.1_5end | |||
|cluster_id=chr6:110501200..110501235,- | |||
|description=CAGE_peak_3_at_WASF1_5end | |||
|id=chr6:110501200..110501235,- | |||
|ontology_enrichment_celltype=CL:0000057!9.07e-08!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.03e-17!94;UBERON:0001016!1.03e-17!94;UBERON:0001049!3.48e-17!57;UBERON:0005068!3.48e-17!57;UBERON:0006241!3.48e-17!57;UBERON:0007135!3.48e-17!57;UBERON:0001017!1.71e-16!82;UBERON:0005743!1.72e-16!86;UBERON:0002616!2.21e-15!59;UBERON:0000955!2.62e-15!69;UBERON:0006238!2.62e-15!69;UBERON:0001893!1.56e-14!34;UBERON:0002346!2.42e-14!90;UBERON:0002020!5.31e-14!34;UBERON:0003528!5.31e-14!34;UBERON:0002780!6.33e-14!41;UBERON:0001890!6.33e-14!41;UBERON:0006240!6.33e-14!41;UBERON:0002791!6.71e-14!33;UBERON:0000924!7.51e-14!173;UBERON:0006601!7.51e-14!173;UBERON:0001869!1.13e-13!32;UBERON:0003080!1.44e-13!42;UBERON:0000475!3.07e-13!365;UBERON:0003075!5.64e-13!86;UBERON:0007284!5.64e-13!86;UBERON:0004121!1.11e-12!169;UBERON:0000033!2.92e-11!123;UBERON:0002619!4.63e-11!22;UBERON:0000153!6.83e-11!129;UBERON:0007811!6.83e-11!129;UBERON:0003056!9.15e-11!61;UBERON:0000956!2.53e-10!25;UBERON:0000203!2.53e-10!25;UBERON:0001950!2.99e-10!20;UBERON:0000119!1.54e-08!312;UBERON:0000483!4.43e-08!309;UBERON:0000064!5.29e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;9.89e-14;34!UBERON:0001869;1.41e-13;32!UBERON:0002791;2.71e-13;32!UBERON:0003528;3.61e-13;34!UBERON:0002020;3.61e-13;34!UBERON:0002619;9.52e-12;22!UBERON:0002780;2.05e-11;41!UBERON:0001890;2.05e-11;41!UBERON:0001950;4.75e-11;20!UBERON:0000956;6.91e-11;25!UBERON:0000203;6.91e-11;25!UBERON:0000073;1.37e-09;53!UBERON:0002616;1.37e-09;53!UBERON:0001017;1.19e-08;75!UBERON:0000955;2.48e-08;68!UBERON:0001016;3.63e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,8.76e-19,56;UBERON:0005068,8.76e-19,56;UBERON:0006241,8.76e-19,56;UBERON:0007135,8.76e-19,56;UBERON:0001016,4.49e-18,89;UBERON:0001017,1.93e-17,81;UBERON:0000073,5.13e-17,53;UBERON:0002616,5.13e-17,53;UBERON:0000955,6.18e-16,68;UBERON:0006238,6.18e-16,68;UBERON:0001893,9.26e-16,34;UBERON:0002780,1.87e-15,41;UBERON:0001890,1.87e-15,41;UBERON:0003080,1.87e-15,41;UBERON:0006240,1.87e-15,41;UBERON:0003528,3.74e-15,34;UBERON:0002020,3.74e-15,34;UBERON:0001869,9.53e-15,32;UBERON:0002791,2.10e-14,32;UBERON:0002346,2.14e-14,86;UBERON:0003075,3.79e-13,82;UBERON:0007284,3.79e-13,82;UBERON:0010371,4.05e-12,104;UBERON:0003056,4.54e-12,61;UBERON:0002619,5.82e-12,22;UBERON:0004121,8.57e-12,171;UBERON:0000924,8.57e-12,171;UBERON:0006601,8.57e-12,171;UBERON:0001950,5.29e-11,20;UBERON:0000956,7.75e-11,25;UBERON:0000203,7.75e-11,25;UBERON:0010314,3.48e-08,132 | |||
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| ||
|short_description=p3@WASF1 | |||
}} | }} |
Latest revision as of 19:27, 19 September 2015
Short description: | p3@WASF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WASF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359451, ENST00000392586, ENST00000392588, ENST00000392589, ENST00000419252, NM_001024934, NM_001024935, NM_001024936, NM_003931, uc003ptv.1, uc003ptw.1, uc003ptx.1, uc003pty.1, uc003ptz.1_5end |
EntrezGene: | WASF1 |
HGNC: | 12732 |
UniProt: | Q92558Q5SZK3Q5SZK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 8.76e-19 | 56 |
neural rod | 8.76e-19 | 56 |
future spinal cord | 8.76e-19 | 56 |
neural keel | 8.76e-19 | 56 |
nervous system | 4.49e-18 | 89 |
central nervous system | 1.93e-17 | 81 |
regional part of nervous system | 5.13e-17 | 53 |
regional part of brain | 5.13e-17 | 53 |
brain | 6.18e-16 | 68 |
future brain | 6.18e-16 | 68 |
telencephalon | 9.26e-16 | 34 |
regional part of forebrain | 1.87e-15 | 41 |
forebrain | 1.87e-15 | 41 |
anterior neural tube | 1.87e-15 | 41 |
future forebrain | 1.87e-15 | 41 |
brain grey matter | 3.74e-15 | 34 |
gray matter | 3.74e-15 | 34 |
cerebral hemisphere | 9.53e-15 | 32 |
regional part of telencephalon | 2.10e-14 | 32 |
neurectoderm | 2.14e-14 | 86 |
neural plate | 3.79e-13 | 82 |
presumptive neural plate | 3.79e-13 | 82 |
ecto-epithelium | 4.05e-12 | 104 |
pre-chordal neural plate | 4.54e-12 | 61 |
regional part of cerebral cortex | 5.82e-12 | 22 |
ectoderm-derived structure | 8.57e-12 | 171 |
ectoderm | 8.57e-12 | 171 |
presumptive ectoderm | 8.57e-12 | 171 |
neocortex | 5.29e-11 | 20 |
cerebral cortex | 7.75e-11 | 25 |
pallium | 7.75e-11 | 25 |
structure with developmental contribution from neural crest | 3.48e-08 | 132 |