FFCP PHASE1:Hg19::chr6:116479897..116479942,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:116479897..116479942,- to FFCP PHASE1:Hg19::chr6:116479897..116479942,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1300 | |EntrezGene=1300 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2185 | |HGNC=2185 | ||
|TSSclassifier=strong | |||
|UniProt=Q5QPC8 | |UniProt=Q5QPC8 | ||
|association_with_transcript=0bp_to_ENST00000418500_5end | |||
|cluster_id=chr6:116479897..116479942,- | |||
|description=CAGE_peak_2_at_COL10A1_5end | |||
|id=chr6:116479897..116479942,- | |||
|ontology_enrichment_celltype=CL:0000055!1.10e-26!180;CL:0000057!2.10e-26!75;CL:0002620!1.78e-17!23;CL:0000048!6.54e-12!430;CL:0000723!2.37e-11!436;CL:0002334!1.21e-10!12;CL:0000034!1.23e-10!444;CL:0002556!8.66e-10!6;CL:0002551!4.82e-09!6;CL:0002552!1.94e-08!5;CL:0000134!1.01e-07!358;CL:0002320!1.62e-07!365;CL:0002559!3.76e-07!4;CL:0000219!4.24e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0002556;8.85e-18;6!CL:0002552;5.42e-15;5!CL:0002334;6.85e-14;12!CL:0000346;2.30e-10;3!CL:1000428;2.30e-10;3!CL:0002559;4.64e-10;5!CL:0000057;1.02e-09;73!CL:0002580;1.94e-09;3!CL:0002582;6.20e-09;3!CL:0002551;3.86e-08;6!CL:0002570;5.45e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,9.28e-18,6;CL:0000057,2.06e-17,76;CL:0002552,4.18e-15,5;CL:0002334,6.28e-14,12;CL:0000346,2.20e-10,3;CL:1000428,2.20e-10,3;CL:0000134,3.72e-10,354;CL:0002559,4.71e-10,5;CL:0000048,7.49e-10,427;CL:0002320,1.01e-09,361;CL:0000723,1.58e-09,433;CL:0000219,1.79e-09,386;CL:0002580,1.81e-09,3;CL:0000034,4.15e-09,441;CL:0002582,6.48e-09,3;CL:0002551,3.27e-08,6;CL:0002570,4.43e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.04e-13!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.25e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.30e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0002199!7.29e-19!45;UBERON:0002416!7.29e-19!45;UBERON:0002097!2.42e-17!40;UBERON:0003102!4.86e-16!95;UBERON:0000914!2.85e-14!83;UBERON:0002329!2.85e-14!83;UBERON:0003077!2.85e-14!83;UBERON:0003059!2.85e-14!83;UBERON:0007282!2.85e-14!83;UBERON:0009618!2.85e-14!83;UBERON:0007285!2.85e-14!83;UBERON:0002067!2.04e-13!9;UBERON:0004016!2.04e-13!9;UBERON:0010083!2.04e-13!9;UBERON:0004290!6.80e-11!70;UBERON:0001758!8.66e-10!6;UBERON:0003672!8.66e-10!6;UBERON:0000992!1.72e-09!13;UBERON:0000486!8.03e-09!82;UBERON:0000475!6.21e-08!365;UBERON:0002118!3.76e-07!5;UBERON:0004532!3.76e-07!5;UBERON:0002073!3.76e-07!4;UBERON:0005086!3.76e-07!4;UBERON:0002384!9.01e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001758;8.85e-18;6!UBERON:0003672;8.85e-18;6!UBERON:0002067;5.89e-16;9!UBERON:0003129;3.96e-15;7!UBERON:0000165;1.22e-10;28!UBERON:0000412;2.30e-10;3!UBERON:0001992;2.30e-10;3!UBERON:0002073;4.64e-10;5!UBERON:0011137;2.43e-09;11!UBERON:0010323;2.43e-09;11!UBERON:0001828;3.22e-09;8!UBERON:0000992;1.39e-07;13!UBERON:0002119;2.34e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001758,9.28e-18,6;UBERON:0003672,9.28e-18,6;UBERON:0002067,4.67e-16,9;UBERON:0004016,4.67e-16,9;UBERON:0010083,4.67e-16,9;UBERON:0003129,4.12e-15,7;UBERON:0003102,5.38e-12,99;UBERON:0000412,2.20e-10,3;UBERON:0001992,2.20e-10,3;UBERON:0000165,3.20e-10,29;UBERON:0000930,3.20e-10,29;UBERON:0002073,4.71e-10,5;UBERON:0005086,4.71e-10,5;UBERON:0010323,2.49e-09,11;UBERON:0001828,2.75e-09,8;UBERON:0002384,3.97e-09,371;UBERON:0002199,9.80e-08,46;UBERON:0002416,9.80e-08,46;UBERON:0000992,1.43e-07,13;UBERON:0002119,2.24e-07,4;UBERON:0011137,3.66e-07,14 | |||
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| ||
|short_description=p2@COL10A1 | |||
}} | }} |
Latest revision as of 00:31, 20 September 2015
Short description: | p2@COL10A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_COL10A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000418500_5end |
EntrezGene: | COL10A1 |
HGNC: | 2185 |
UniProt: | Q5QPC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 9.28e-18 | 6 |
fibroblast | 2.06e-17 | 76 |
fibroblast of gingiva | 4.18e-15 | 5 |
preadipocyte | 6.28e-14 | 12 |
hair follicle dermal papilla cell | 2.20e-10 | 3 |
stem cell of epidermis | 2.20e-10 | 3 |
mesenchymal cell | 3.72e-10 | 354 |
hair follicle cell | 4.71e-10 | 5 |
multi fate stem cell | 7.49e-10 | 427 |
connective tissue cell | 1.01e-09 | 361 |
somatic stem cell | 1.58e-09 | 433 |
motile cell | 1.79e-09 | 386 |
preadipocyte of the breast | 1.81e-09 | 3 |
stem cell | 4.15e-09 | 441 |
visceral preadipocyte | 6.48e-09 | 3 |
fibroblast of dermis | 3.27e-08 | 6 |
mesenchymal stem cell of adipose | 4.43e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
periodontium | 9.28e-18 | 6 |
dentition | 9.28e-18 | 6 |
dermis | 4.67e-16 | 9 |
dermatome | 4.67e-16 | 9 |
future dermis | 4.67e-16 | 9 |
skull | 4.12e-15 | 7 |
surface structure | 5.38e-12 | 99 |
dermal papilla | 2.20e-10 | 3 |
papillary layer of dermis | 2.20e-10 | 3 |
mouth | 3.20e-10 | 29 |
stomodeum | 3.20e-10 | 29 |
hair follicle | 4.71e-10 | 5 |
hair follicle placode | 4.71e-10 | 5 |
cranial skeletal system | 2.49e-09 | 11 |
gingiva | 2.75e-09 | 8 |
connective tissue | 3.97e-09 | 371 |
integument | 9.80e-08 | 46 |
integumental system | 9.80e-08 | 46 |
female gonad | 1.43e-07 | 13 |
left ovary | 2.24e-07 | 4 |
axial skeletal system | 3.66e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.30e-12 | 14 |