FFCP PHASE1:Hg19::chr6:132455490..132455504,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:132455490..132455504,+ to FFCP PHASE1:Hg19::chr6:132455490..132455504,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-46bp_to_ENST00000443303_5end | |||
|cluster_id=chr6:132455490..132455504,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_1_at_ENST00000443303_5end | |||
|id=chr6:132455490..132455504,+ | |||
|ontology_enrichment_celltype=CL:0002139!5.38e-20!24;CL:0000057!1.24e-16!75;CL:0000055!3.08e-15!180;CL:0000115!4.75e-14!35;CL:0005020!2.83e-13!6;CL:0002138!2.83e-13!6;CL:0005022!2.83e-13!6;CL:0002078!1.30e-11!44;CL:0000071!1.94e-10!18;CL:0002546!1.94e-10!18;CL:0000222!7.40e-10!119;CL:0002620!1.49e-09!23;CL:1000413!8.32e-09!9;CL:0002371!5.09e-08!591;CL:0000213!6.37e-08!57;CL:0000215!6.37e-08!57;CL:0000135!1.98e-07!3;CL:0000386!1.98e-07!3;CL:0000388!1.98e-07!3;CL:0002579!2.81e-07!3;CL:0002618!3.87e-07!3;CL:0000144!6.22e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0000197;5.78e-17;6!CL:0000098;5.78e-17;6!CL:0002167;5.78e-17;6!CL:1000306;1.27e-14;4!CL:0002547;1.27e-14;4!CL:0002139;7.45e-12;24!CL:1000413;2.76e-11;9!CL:0002544;7.10e-10;6!CL:0000071;1.94e-08;18!CL:0000222;5.22e-08;1!CL:0000115;6.37e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,6.29e-17,6;CL:0000098,6.29e-17,6;CL:0002167,6.29e-17,6;CL:1000306,1.50e-14,4;CL:0002547,1.50e-14,4;CL:0002139,9.16e-12,24;CL:1000413,3.08e-11,9;CL:0002544,8.03e-10,6;CL:0000057,1.75e-09,76;CL:0000071,2.14e-08,18;CL:0002546,2.14e-08,18;CL:0000115,1.45e-07,36 | |||
|ontology_enrichment_development_v019=CL:0002546;1.94e-08;18!UBERON:0003099;1.15e-07;1!UBERON:0003852;1.15e-07;1 | |||
|ontology_enrichment_disease=DOID:17!1.42e-07!5;DOID:450!1.42e-07!5;DOID:66!1.42e-07!5;DOID:423!1.42e-07!5;DOID:0080000!1.42e-07!5;DOID:11722!1.42e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:3371;4.28e-08;1!DOID:4549;4.28e-08;1!DOID:5861;4.28e-08;1!DOID:6496;4.28e-08;1!DOID:2513;4.57e-08;1!DOID:3571;2.17e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.28e-08,1;DOID:4549,4.28e-08,1;DOID:5861,4.28e-08,1;DOID:6496,4.28e-08,1;DOID:2513,4.57e-08,1;DOID:3571,2.04e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.36e-22!79;UBERON:0007798!2.36e-22!79;UBERON:0000055!4.40e-22!69;UBERON:0001981!5.49e-16!60;UBERON:0007500!5.49e-16!60;UBERON:0004537!5.49e-16!60;UBERON:0006965!5.49e-16!60;UBERON:0004535!1.21e-15!110;UBERON:0001009!5.73e-15!113;UBERON:0001637!3.34e-14!42;UBERON:0003509!3.34e-14!42;UBERON:0004572!3.34e-14!42;UBERON:0004872!1.14e-12!84;UBERON:0001986!1.94e-10!18;UBERON:0004638!1.94e-10!18;UBERON:0004852!1.94e-10!18;UBERON:0001473!9.76e-10!8;UBERON:0004536!9.76e-10!8;UBERON:0006558!9.76e-10!8;UBERON:0003915!8.32e-09!9;UBERON:0004700!8.32e-09!9;UBERON:0001917!8.32e-09!9;UBERON:0004573!8.61e-09!33;UBERON:0004571!8.61e-09!33;UBERON:0006914!2.38e-08!25;UBERON:0000487!3.88e-08!22;UBERON:0002465!1.29e-07!10;UBERON:0000043!1.98e-07!3;UBERON:0000947!2.75e-07!21;UBERON:0010191!2.75e-07!21;UBERON:0003914!4.96e-07!118;UBERON:0002066!7.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.27e-14;4!UBERON:0000415;1.27e-14;4!UBERON:0007240;1.27e-14;4!UBERON:0005742;1.27e-14;4!UBERON:0005734;1.27e-14;4!UBERON:0004664;1.27e-14;4!UBERON:0004663;1.27e-14;4!UBERON:0003915;2.76e-11;9!UBERON:0004700;2.76e-11;9!UBERON:0001917;2.76e-11;9!UBERON:0001637;1.34e-10;42!UBERON:0003509;1.34e-10;42!UBERON:0004572;1.34e-10;42!UBERON:0000947;3.78e-10;21!UBERON:0010191;3.78e-10;21!UBERON:0004573;4.11e-10;33!UBERON:0004571;4.11e-10;33!UBERON:0004638;1.94e-08;18!UBERON:0001986;1.94e-08;18!UBERON:0004852;1.94e-08;18!UBERON:0007500;2.73e-08;56!UBERON:0001981;2.73e-08;56!UBERON:0004537;2.73e-08;56!UBERON:0005705;1.15e-07;1!UBERON:0008193;1.15e-07;1!UBERON:0010912;1.15e-07;1!UBERON:0002514;1.15e-07;1!UBERON:0003457;1.15e-07;1!UBERON:0008907;1.15e-07;1!UBERON:0008001;1.15e-07;1!UBERON:0007213;1.15e-07;1!UBERON:0009891;1.15e-07;1!UBERON:0007914;1.15e-07;1!UBERON:0007375;1.15e-07;1!UBERON:0003323;1.15e-07;1!UBERON:0010258;1.15e-07;1!UBERON:0005253;1.15e-07;1!UBERON:0007842;1.15e-07;1!UBERON:0002397;1.15e-07;1!UBERON:0003113;1.15e-07;1!UBERON:0003277;1.15e-07;1!UBERON:0001709;1.15e-07;1!UBERON:0002244;1.15e-07;1!UBERON:0005620;1.15e-07;1!UBERON:0010364;1.15e-07;1!UBERON:0004288;1.15e-07;1!UBERON:0000487;7.33e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,1.50e-14,4;UBERON:0007240,1.50e-14,4;UBERON:0005742,1.50e-14,4;UBERON:0005734,1.50e-14,4;UBERON:0004664,1.50e-14,4;UBERON:0004663,1.50e-14,4;UBERON:0003915,3.08e-11,9;UBERON:0004700,3.08e-11,9;UBERON:0001917,3.08e-11,9;UBERON:0004573,5.16e-11,33;UBERON:0004571,5.16e-11,33;UBERON:0000055,6.77e-11,68;UBERON:0001637,1.21e-10,42;UBERON:0003509,1.21e-10,42;UBERON:0004572,1.21e-10,42;UBERON:0000947,4.30e-10,21;UBERON:0010191,4.30e-10,21;UBERON:0002049,3.25e-09,78;UBERON:0007798,3.25e-09,78;UBERON:0007500,7.61e-09,59;UBERON:0001981,7.61e-09,59;UBERON:0004537,7.61e-09,59;UBERON:0006965,7.61e-09,59;UBERON:0004797,1.57e-08,7;UBERON:0004638,2.14e-08,18;UBERON:0001986,2.14e-08,18;UBERON:0004852,2.14e-08,18;UBERON:0005705,1.22e-07,1;UBERON:0008193,1.22e-07,1;UBERON:0010912,1.22e-07,1;UBERON:0002514,1.22e-07,1;UBERON:0003457,1.22e-07,1;UBERON:0008907,1.22e-07,1;UBERON:0008001,1.22e-07,1;UBERON:0007213,1.22e-07,1;UBERON:0009891,1.22e-07,1;UBERON:0007914,1.22e-07,1;UBERON:0009292,1.22e-07,1;UBERON:0003099,1.22e-07,1;UBERON:0007375,1.22e-07,1;UBERON:0003323,1.22e-07,1;UBERON:0010258,1.22e-07,1;UBERON:0007842,1.22e-07,1;UBERON:0009494,1.22e-07,1;UBERON:0010042,1.22e-07,1;UBERON:0010045,1.22e-07,1;UBERON:0010259,1.22e-07,1;UBERON:0010359,1.22e-07,1;UBERON:0009526,1.22e-07,1;UBERON:0002397,1.22e-07,1;UBERON:0003113,1.22e-07,1;UBERON:0003277,1.22e-07,1;UBERON:0001709,1.22e-07,1;UBERON:0004066,1.22e-07,1;UBERON:0002244,1.22e-07,1;UBERON:0005620,1.22e-07,1;UBERON:0004362,1.22e-07,1;UBERON:0010364,1.22e-07,1;UBERON:0010046,1.22e-07,1;UBERON:0005868,1.22e-07,1;UBERON:0007238,1.22e-07,1;UBERON:0004288,1.22e-07,1;UBERON:0004068,1.22e-07,1;UBERON:0010334,1.22e-07,1;UBERON:0003852,1.22e-07,1;UBERON:0010253,1.22e-07,1;UBERON:0004535,4.00e-07,109;UBERON:0004872,4.36e-07,83;UBERON:0001009,7.19e-07,112;UBERON:0000487,7.92e-07,22 | |||
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|short_description=p1@ENST00000443303 | |||
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Latest revision as of 19:30, 30 July 2015
Short description: | p1@ENST00000443303 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000443303_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -46bp_to_ENST00000443303_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 6.29e-17 | 6 |
sensory epithelial cell | 6.29e-17 | 6 |
olfactory epithelial cell | 6.29e-17 | 6 |
fibroblast of tunica adventitia of artery | 1.50e-14 | 4 |
fibroblast of the aortic adventitia | 1.50e-14 | 4 |
endothelial cell of vascular tree | 9.16e-12 | 24 |
endothelial cell of artery | 3.08e-11 | 9 |
aortic endothelial cell | 8.03e-10 | 6 |
fibroblast | 1.75e-09 | 76 |
blood vessel endothelial cell | 2.14e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.14e-08 | 18 |
endothelial cell | 1.45e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.28e-08 | 1 |
extraosseous chondrosarcoma | 4.28e-08 | 1 |
myxoid chondrosarcoma | 4.28e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 4.28e-08 | 1 |
basal cell carcinoma | 4.57e-08 | 1 |
liver cancer | 2.04e-07 | 1 |