FFCP PHASE1:Hg19::chr6:30654935..30654970,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:30654935..30654970,- to FFCP PHASE1:Hg19::chr6:30654935..30654970,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=170954 | |EntrezGene=170954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29413 | |HGNC=29413 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000467662,ENST00000488324_5end | |||
|cluster_id=chr6:30654935..30654970,- | |||
|description=CAGE_peak_3_at_PPP1R18_5end | |||
|id=chr6:30654935..30654970,- | |||
|ontology_enrichment_celltype=CL:0002371!5.40e-33!591;CL:0000144!3.23e-30!625;CL:0000548!5.26e-25!679;CL:0000004!5.26e-25!679;CL:0000255!5.26e-25!679;CL:0000055!1.96e-24!180;CL:0000012!3.22e-24!682;CL:0000003!2.11e-17!722;CL:0000222!1.22e-15!119;CL:0000057!1.68e-15!75;CL:0002057!1.59e-13!42;CL:0000723!4.89e-13!436;CL:0000048!6.06e-13!430;CL:0000220!2.86e-12!246;CL:0000860!7.87e-12!45;CL:0002321!1.24e-11!248;CL:0000183!2.83e-11!59;CL:0000034!2.93e-11!444;CL:0000063!8.65e-10!578;CL:0000187!1.59e-09!54;CL:0000680!1.67e-09!57;CL:0000056!1.67e-09!57;CL:0000355!1.67e-09!57;CL:0000192!2.13e-09!42;CL:0000514!2.13e-09!42;CL:0000359!7.25e-09!32;CL:0000766!2.54e-08!76;CL:0002194!9.15e-08!63;CL:0000576!9.15e-08!63;CL:0000040!9.15e-08!63;CL:0000559!9.15e-08!63;CL:0002320!1.60e-07!365;CL:0002009!2.82e-07!65;CL:0000393!3.05e-07!60;CL:0000211!3.05e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.93e-14;33!CL:0002057;5.93e-14;33!CL:0000473;7.24e-11;39!CL:0000234;7.24e-11;39!CL:0000359;1.66e-08;32!CL:0000576;1.06e-07;48!CL:0000192;1.60e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.50e-16,121;CL:0000057,1.15e-15,76;CL:0000723,1.34e-13,433;CL:0000860,1.59e-13,42;CL:0002057,1.59e-13,42;CL:0000048,1.61e-13,427;CL:0000473,1.83e-12,48;CL:0000234,1.83e-12,48;CL:0002321,6.41e-12,250;CL:0000034,8.96e-12,441;CL:0000187,8.68e-10,55;CL:0000680,9.19e-10,58;CL:0000056,9.19e-10,58;CL:0000355,9.19e-10,58;CL:0000192,1.15e-09,43;CL:0000514,1.15e-09,43;CL:0000766,5.10e-09,72;CL:0000359,7.24e-09,32;CL:0002194,1.58e-08,59;CL:0000576,1.58e-08,59;CL:0000040,1.58e-08,59;CL:0000559,1.58e-08,59;CL:0002009,5.61e-08,61;CL:0002320,8.49e-08,361;CL:0000393,1.77e-07,61;CL:0000211,1.77e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-10;42!CL:0000514;1.60e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.59e-22!216;UBERON:0000926!2.59e-17!448;UBERON:0004120!2.59e-17!448;UBERON:0006603!2.59e-17!448;UBERON:0002204!3.80e-16!167;UBERON:0004535!7.63e-16!110;UBERON:0001009!1.24e-14!113;UBERON:0002049!2.62e-13!79;UBERON:0007798!2.62e-13!79;UBERON:0004872!4.78e-13!84;UBERON:0000055!1.47e-12!69;UBERON:0001981!3.52e-12!60;UBERON:0007500!3.52e-12!60;UBERON:0004537!3.52e-12!60;UBERON:0006965!3.52e-12!60;UBERON:0001637!4.62e-12!42;UBERON:0003509!4.62e-12!42;UBERON:0004572!4.62e-12!42;UBERON:0000467!3.38e-11!625;UBERON:0000486!4.31e-11!82;UBERON:0000480!5.12e-11!626;UBERON:0000468!1.42e-10!659;UBERON:0003914!1.84e-10!118;UBERON:0004573!7.51e-10!33;UBERON:0004571!7.51e-10!33;UBERON:0000914!8.86e-10!83;UBERON:0002329!8.86e-10!83;UBERON:0003077!8.86e-10!83;UBERON:0003059!8.86e-10!83;UBERON:0007282!8.86e-10!83;UBERON:0009618!8.86e-10!83;UBERON:0007285!8.86e-10!83;UBERON:0004290!2.27e-09!70;UBERON:0004765!3.37e-08!101;UBERON:0001434!3.37e-08!101;UBERON:0005256!3.47e-08!143;UBERON:0000923!6.68e-08!604;UBERON:0005291!6.68e-08!604;UBERON:0006598!6.68e-08!604;UBERON:0002532!6.68e-08!604;UBERON:0001134!7.86e-08!61;UBERON:0002036!7.86e-08!61;UBERON:0003082!7.86e-08!61;UBERON:0002050!8.22e-08!605;UBERON:0005423!8.22e-08!605;UBERON:0002384!1.04e-07!375;UBERON:0001474!2.08e-07!86;UBERON:0002385!2.21e-07!63;UBERON:0001015!2.21e-07!63;UBERON:0000383!2.21e-07!63;UBERON:0002371!5.98e-07!80;UBERON:0002193!8.37e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;6.84e-09;33!UBERON:0004571;6.84e-09;33!UBERON:0001637;8.82e-09;42!UBERON:0003509;8.82e-09;42!UBERON:0004572;8.82e-09;42!UBERON:0007500;3.10e-07;56!UBERON:0001981;3.10e-07;56!UBERON:0004537;3.10e-07;56 | |||
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| ||
|short_description=p3@PPP1R18 | |||
}} | }} |
Latest revision as of 17:46, 17 September 2015
Short description: | p3@PPP1R18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP1R18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000467662, ENST00000488324_5end |
EntrezGene: | PPP1R18 |
HGNC: | 29413 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.50e-16 | 121 |
fibroblast | 1.15e-15 | 76 |
somatic stem cell | 1.34e-13 | 433 |
classical monocyte | 1.59e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-13 | 42 |
multi fate stem cell | 1.61e-13 | 427 |
defensive cell | 1.83e-12 | 48 |
phagocyte | 1.83e-12 | 48 |
embryonic cell | 6.41e-12 | 250 |
stem cell | 8.96e-12 | 441 |
muscle cell | 8.68e-10 | 55 |
muscle precursor cell | 9.19e-10 | 58 |
myoblast | 9.19e-10 | 58 |
multi-potent skeletal muscle stem cell | 9.19e-10 | 58 |
smooth muscle cell | 1.15e-09 | 43 |
smooth muscle myoblast | 1.15e-09 | 43 |
myeloid leukocyte | 5.10e-09 | 72 |
vascular associated smooth muscle cell | 7.24e-09 | 32 |
monopoietic cell | 1.58e-08 | 59 |
monocyte | 1.58e-08 | 59 |
monoblast | 1.58e-08 | 59 |
promonocyte | 1.58e-08 | 59 |
macrophage dendritic cell progenitor | 5.61e-08 | 61 |
connective tissue cell | 8.49e-08 | 361 |
electrically responsive cell | 1.77e-07 | 61 |
electrically active cell | 1.77e-07 | 61 |