FFCP PHASE1:Hg19::chr6:43484592..43484601,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:43484592..43484601,- to FFCP PHASE1:Hg19::chr6:43484592..43484601,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25844 | |EntrezGene=25844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21023 | |HGNC=21023 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBQ1 | |UniProt=D6RBQ1 | ||
|association_with_transcript=55bp_to_ENST00000455768_5end | |||
|cluster_id=chr6:43484592..43484601,- | |||
|description=CAGE_peak_5_at_YIPF3_5end | |||
|id=chr6:43484592..43484601,- | |||
|ontology_enrichment_celltype=CL:0002321!1.07e-24!248;CL:0000220!1.54e-24!246;CL:0000222!2.61e-19!119;CL:0000066!1.35e-15!254;CL:0000192!1.48e-12!42;CL:0000514!1.48e-12!42;CL:0000115!6.85e-12!35;CL:0000359!8.08e-12!32;CL:0002139!2.04e-11!24;CL:0000071!8.55e-11!18;CL:0002546!8.55e-11!18;CL:0000055!1.12e-10!180;CL:0000680!2.64e-10!57;CL:0000056!2.64e-10!57;CL:0000355!2.64e-10!57;CL:0000183!3.89e-10!59;CL:0000213!3.95e-10!57;CL:0000215!3.95e-10!57;CL:0002078!5.64e-10!44;CL:0000187!1.65e-09!54;CL:0000548!2.22e-09!679;CL:0000004!2.22e-09!679;CL:0000255!2.22e-09!679;CL:0000393!2.76e-09!60;CL:0000211!2.76e-09!60;CL:0000076!3.37e-09!62;CL:0000012!5.91e-09!682 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.71e-17;24!CL:0000071;5.89e-16;18!CL:0000115;1.13e-15;36!CL:0000359;3.82e-13;32!CL:0002078;8.48e-10;45!CL:1000413;1.17e-09;9!CL:0000192;5.11e-09;43!CL:0000213;6.08e-09;58!CL:0000215;6.08e-09;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.81e-20,121;CL:0000115,3.44e-19,36;CL:0002139,4.10e-17,24;CL:0002321,4.57e-17,250;CL:0000071,2.47e-16,18;CL:0002546,2.47e-16,18;CL:0002078,2.93e-14,45;CL:0000359,1.46e-13,32;CL:0000213,1.83e-13,58;CL:0000215,1.83e-13,58;CL:0000192,3.18e-11,43;CL:0000514,3.18e-11,43;CL:1000413,1.33e-09,9;CL:0000066,8.98e-09,253;CL:0000680,1.07e-08,58;CL:0000056,1.07e-08,58;CL:0000355,1.07e-08,58;CL:0000076,3.35e-08,63;CL:0000187,3.78e-08,55;CL:0000393,2.71e-07,61;CL:0000211,2.71e-07,61 | |||
|ontology_enrichment_development_v019=CL:0002546;5.89e-16;18!CL:0000514;5.11e-09;43!CL:0000222;2.92e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.80e-23!79;UBERON:0007798!1.80e-23!79;UBERON:0000055!1.11e-22!69;UBERON:0004872!7.73e-21!84;UBERON:0003914!1.19e-20!118;UBERON:0001981!2.05e-20!60;UBERON:0007500!2.05e-20!60;UBERON:0004537!2.05e-20!60;UBERON:0006965!2.05e-20!60;UBERON:0000119!2.33e-19!312;UBERON:0000483!3.21e-19!309;UBERON:0000490!5.24e-17!138;UBERON:0001637!1.31e-15!42;UBERON:0003509!1.31e-15!42;UBERON:0004572!1.31e-15!42;UBERON:0001009!2.52e-15!113;UBERON:0004535!2.61e-15!110;UBERON:0000477!2.71e-15!286;UBERON:0004111!1.20e-14!241;UBERON:0000025!7.34e-13!194;UBERON:0000468!6.65e-12!659;UBERON:0000487!2.17e-11!22;UBERON:0004573!2.72e-11!33;UBERON:0004571!2.72e-11!33;UBERON:0005256!3.17e-11!143;UBERON:0000475!3.62e-11!365;UBERON:0001986!8.55e-11!18;UBERON:0004638!8.55e-11!18;UBERON:0004852!8.55e-11!18;UBERON:0000480!1.92e-10!626;UBERON:0000467!3.18e-10!625;UBERON:0000481!4.66e-10!347;UBERON:0006914!1.44e-09!25;UBERON:0002100!4.96e-09!216;UBERON:0000922!8.60e-09!612;UBERON:0000914!2.24e-08!83;UBERON:0002329!2.24e-08!83;UBERON:0003077!2.24e-08!83;UBERON:0003059!2.24e-08!83;UBERON:0007282!2.24e-08!83;UBERON:0009618!2.24e-08!83;UBERON:0007285!2.24e-08!83;UBERON:0001134!2.29e-08!61;UBERON:0002036!2.29e-08!61;UBERON:0003082!2.29e-08!61;UBERON:0000923!2.68e-08!604;UBERON:0005291!2.68e-08!604;UBERON:0006598!2.68e-08!604;UBERON:0002532!2.68e-08!604;UBERON:0002050!4.32e-08!605;UBERON:0005423!4.32e-08!605;UBERON:0003104!7.43e-08!238;UBERON:0009142!7.43e-08!238;UBERON:0002385!1.30e-07!63;UBERON:0001015!1.30e-07!63;UBERON:0000383!1.30e-07!63;UBERON:0004290!2.05e-07!70;UBERON:0000486!2.73e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;5.07e-17;56!UBERON:0001981;5.07e-17;56!UBERON:0004537;5.07e-17;56!UBERON:0000055;9.67e-17;65!UBERON:0000487;1.03e-16;22!UBERON:0004638;5.89e-16;18!UBERON:0001986;5.89e-16;18!UBERON:0004852;5.89e-16;18!UBERON:0001637;1.07e-15;42!UBERON:0003509;1.07e-15;42!UBERON:0004572;1.07e-15;42!UBERON:0003914;2.24e-14;74!UBERON:0002049;4.09e-14;75!UBERON:0007798;4.09e-14;75!UBERON:0006914;9.19e-14;25!UBERON:0004573;3.53e-12;33!UBERON:0004571;3.53e-12;33!UBERON:0000490;5.59e-12;33!UBERON:0003915;1.17e-09;9!UBERON:0004700;1.17e-09;9!UBERON:0001917;1.17e-09;9!UBERON:0000025;3.20e-09;93!UBERON:0001009;6.12e-08;112!UBERON:0003513;9.53e-08;7!UBERON:0004535;1.16e-07;109!UBERON:0000947;1.77e-07;21!UBERON:0010191;1.77e-07;21!UBERON:0010260;4.79e-07;9!UBERON:0000119;4.85e-07;139!UBERON:0001638;7.33e-07;9!UBERON:0003920;7.33e-07;9!UBERON:0004582;7.33e-07;9!UBERON:0000483;8.12e-07;136 | |||
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| ||
|short_description=p5@YIPF3 | |||
}} | }} |
Latest revision as of 22:30, 18 September 2015
Short description: | p5@YIPF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_YIPF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 55bp_to_ENST00000455768_5end |
EntrezGene: | YIPF3 |
HGNC: | 21023 |
UniProt: | D6RBQ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.81e-20 | 121 |
endothelial cell | 3.44e-19 | 36 |
endothelial cell of vascular tree | 4.10e-17 | 24 |
embryonic cell | 4.57e-17 | 250 |
blood vessel endothelial cell | 2.47e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.47e-16 | 18 |
meso-epithelial cell | 2.93e-14 | 45 |
vascular associated smooth muscle cell | 1.46e-13 | 32 |
lining cell | 1.83e-13 | 58 |
barrier cell | 1.83e-13 | 58 |
smooth muscle cell | 3.18e-11 | 43 |
smooth muscle myoblast | 3.18e-11 | 43 |
endothelial cell of artery | 1.33e-09 | 9 |
epithelial cell | 8.98e-09 | 253 |
muscle precursor cell | 1.07e-08 | 58 |
myoblast | 1.07e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.07e-08 | 58 |
squamous epithelial cell | 3.35e-08 | 63 |
muscle cell | 3.78e-08 | 55 |
electrically responsive cell | 2.71e-07 | 61 |
electrically active cell | 2.71e-07 | 61 |