FFCP PHASE1:Hg19::chr7:134618321..134618341,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:134618321..134618341,+ to FFCP PHASE1:Hg19::chr7:134618321..134618341,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=800 | |EntrezGene=800 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1441 | |HGNC=1441 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=252bp_to_BX648808_5end | |||
|cluster_id=chr7:134618321..134618341,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_14_at_CALD1_5end | |||
|id=chr7:134618321..134618341,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.92e-26!115;UBERON:0001049!2.89e-12!57;UBERON:0005068!2.89e-12!57;UBERON:0006241!2.89e-12!57;UBERON:0007135!2.89e-12!57;UBERON:0001017!7.58e-12!82;UBERON:0000073!2.66e-11!94;UBERON:0001016!2.66e-11!94;UBERON:0000468!3.94e-11!659;UBERON:0005743!8.91e-11!86;UBERON:0000062!9.90e-11!511;UBERON:0000955!1.14e-10!69;UBERON:0006238!1.14e-10!69;UBERON:0000924!1.68e-10!173;UBERON:0006601!1.68e-10!173;UBERON:0002616!1.85e-10!59;UBERON:0002346!2.77e-10!90;UBERON:0004121!3.47e-10!169;UBERON:0003075!5.18e-10!86;UBERON:0007284!5.18e-10!86;UBERON:0002780!8.15e-10!41;UBERON:0001890!8.15e-10!41;UBERON:0006240!8.15e-10!41;UBERON:0003080!3.04e-09!42;UBERON:0002020!5.45e-09!34;UBERON:0003528!5.45e-09!34;UBERON:0000467!6.46e-09!625;UBERON:0000033!8.77e-09!123;UBERON:0000480!9.38e-09!626;UBERON:0001893!1.28e-08!34;UBERON:0002791!1.55e-08!33;UBERON:0000153!3.03e-08!129;UBERON:0007811!3.03e-08!129;UBERON:0001869!6.21e-08!32;UBERON:0000475!8.38e-08!365;UBERON:0000481!2.31e-07!347;UBERON:0000477!2.80e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.63e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,7.28e-27,114;UBERON:0001049,1.00e-09,56;UBERON:0005068,1.00e-09,56;UBERON:0006241,1.00e-09,56;UBERON:0007135,1.00e-09,56;UBERON:0001017,2.92e-09,81;UBERON:0000955,3.57e-09,68;UBERON:0006238,3.57e-09,68;UBERON:0000073,3.80e-09,53;UBERON:0002616,3.80e-09,53;UBERON:0003075,5.30e-09,82;UBERON:0007284,5.30e-09,82;UBERON:0002346,1.28e-08,86;UBERON:0001016,1.52e-08,89;UBERON:0011216,2.57e-08,223;UBERON:0004121,7.41e-08,171;UBERON:0000924,7.41e-08,171;UBERON:0006601,7.41e-08,171;UBERON:0010314,1.29e-07,132;UBERON:0010371,2.61e-07,104 | |||
|phase1_expression=1.45342703416445,1.92690471501885,1.55049844505568,0,1.78784437770915,0,2.53299878168311,0,0,0,0,0,0,0,0,2.6893005858071,1.20538905604795,0.730310090387373,0.487932798790507,0,0,0.626909442956176,0.572471974262113,0.410623275218653,1.88313959392204,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.44575660953827,0,2.60723734129483,0,0,1.22895262313288,1.10864698731282,2.19586964232815,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,1.33888245105868,0,0,0.732186172644509,0,0,0.446498641420399,0,0.225222960966644,0,0,0,0,0,0,5.4666914686485,0.759783069987479,5.03154887090231,1.72101972449288,1.06400514659507,0,0,0.49333509683432,0,0.134710672069688,0,0,0,0,0.624320153660641,0,0.747243402759005,0.117434498643765,0,0,0,0.859840221182376,0.309977343527296,0,1.23633464639278,0,0,0.673344455816265,0.125118519871964,0,0,1.5324389789951,0.45071417671979,0,6.45802688479903,2.13557388818567,1.90738711043606,0.300091096084402,0.618315175430633,3.86460810068444,1.48893485065272,5.23206629947925,0.292311015483596,2.52433774244115,0.552299391853796,0.646584227275248,6.03516307278244,0.403008392910561,1.18692414617341,0,0.272746120590835,0,0.365921118388786,0.132529768321485,0,0.518305275076852,0.252320850875628,0.72995471815166,0,3.85944562915731,0,1.39310378409594,0,0.591534000199219,0.168584690078102,0.482022059766964,0.661763836394364,0.217879444092406,0.71181185733329,0.808987848960987,0.392442930250692,0.38474715694639,0,0,0,0,5.07020139287323,3.9313088667105,6.49868897349544,0,0.122988438543114,0.343135620597051,0.219500570817251,0,1.10581869652794,0.277765335475589,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,1.90254152234598,0,0,0,0,0,0,0.839910640994298,0.708875486211932,0.716468181622786,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.411309970813294,0,0,0,0,0,1.03417372606222,0,1.690605505112,2.92531928243358,2.08014873822732,0,0,0,1.14382394926518,0.542621605391443,0.823240336780769,0.65147236858747,0,0,0.301439377059586,0,4.29883862082845,0,0,0,1.4377491329495,0,0,0.723906533337896,1.02738161275192,0.179060963239896,0,0,0,0,0,0,0.773288812777695,0.167516265334349,1.27587750330633,0,0,0,0,0,0,10.1905722150095,12.8468871933956,6.78120384645919,5.03708084468667,0,0,0,0.664225598535437,0.184369168541703,0.521301686808497,0,0,0,0,0,0,0,0,0.496215615637554,5.98501695823444,0.280660094433074,2.43464383585832,2.55853624533352,6.91671860917512,1.48418066444991,1.07946785661859,0.532685175939381,0.492762936082855,0.519254429183621,0.232420756919918,0.362578348774867,0.200506470303285,0.736647911487171,0.574072240823034,0.910455840033585,1.31124414959424,0,0.0770153371044148,0,0,0.105551628892876,0,0.170093705276516,0.647747748306418,0,0.270946437543853,0,0,0,0,0,0,0,0,0,1.54561517471583,1.09883357782012,0.742585499285292,0,0,1.6068392984416,0.193341436584244,0.308097234229289,0.460511024178389,0.413509717453592,1.18162269355101,0.435050081742686,0.681813019328807,0.712256285173899,0,0.192190067365106,2.93509238737543,0.30347334256665,0,2.51849877464512,0,0,0,0,0,0,0,1.89827654831236,1.5250415513906,0,0,0,0,0.359744915166629,0.54907405947211,0.471249609382746,0,0,0,0,0.974853958525138,0,0.818999468447914,3.81794666275024,0,0,0,0,0,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,1.05553817648832,0.987884678879706,0,0,0,0,0,2.82431402330337,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0.540031437238115,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0.284136146806413,0,0.296964680832639,1.22864280839693,2.98244294329889,1.1253553312841,0.333926115068718,0,0.422250816255987,39.6503496619629,4.14425873296722,0.251932747854276,0.613612095012929,0,3.11039587661807,0,0,0,30.9740293699972,0,1.11136990144637,0,1.11321717794222,0,0,0,0,0.341380344856499,0,0,0,0,0.694499979733169,0.885741385813839,1.92954301800653,3.05163472634166,4.20201187738654,1.47773809476774,2.85201016300164,0.10893846351899,0,9.84963308848602,0.683652335082007,0.69169171316418,1.52587995496613,0.54323685961004,0,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.424059214301822,0,5.97157158647103,6.28048707973708,26.2742962321459,0,0,0,1.21322039365219,2.40773294189637,0.234264445725339,0,0,0.971121518136371,49.7176347590232,16.9387002468129,0.30607276163049,4.42306057399416,0,0.103688191397247,0,0,0,0,0,0.693373365065693,0.173559738335131,0.195984794828755,0.174118413160805,12.0561401087001,0,0.870806981601766,1.09633975629278,1.06750094169172,21.4345726439407,0.441280633457501,4.51961481561065,0.822251547880505,0.19871461170299,0.759729551470544,1.75996244461323,0.160317640503067,10.886102731707,1.19885765749278,0,0,0.343189995723929,0,0.124252535565433,0.471388069233591,2.31037150325144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| ||
|short_description=p14@CALD1 | |||
}} | }} |
Latest revision as of 12:12, 16 September 2015
Short description: | p14@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CALD1_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | 252bp_to_BX648808_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.28e-27 | 114 |
neural tube | 1.00e-09 | 56 |
neural rod | 1.00e-09 | 56 |
future spinal cord | 1.00e-09 | 56 |
neural keel | 1.00e-09 | 56 |
central nervous system | 2.92e-09 | 81 |
brain | 3.57e-09 | 68 |
future brain | 3.57e-09 | 68 |
regional part of nervous system | 3.80e-09 | 53 |
regional part of brain | 3.80e-09 | 53 |
neural plate | 5.30e-09 | 82 |
presumptive neural plate | 5.30e-09 | 82 |
neurectoderm | 1.28e-08 | 86 |
nervous system | 1.52e-08 | 89 |
organ system subdivision | 2.57e-08 | 223 |
ectoderm-derived structure | 7.41e-08 | 171 |
ectoderm | 7.41e-08 | 171 |
presumptive ectoderm | 7.41e-08 | 171 |
structure with developmental contribution from neural crest | 1.29e-07 | 132 |
ecto-epithelium | 2.61e-07 | 104 |