FFCP PHASE1:Hg19::chr7:75931982..75932005,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:75931982..75932005,+ to FFCP PHASE1:Hg19::chr7:75931982..75932005,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3315 | |EntrezGene=3315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5246 | |HGNC=5246 | ||
|TSSclassifier=strong | |||
|UniProt=B4DL87,F8WE04 | |UniProt=B4DL87,F8WE04 | ||
|association_with_transcript=0bp_to_ENST00000432276,ENST00000447574_5end | |||
|cluster_id=chr7:75931982..75932005,+ | |||
|coexpression_cluster_id=C4699 | |||
|description=CAGE_peak_1_at_HSPB1_5end | |||
|id=chr7:75931982..75932005,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.28e-15!119;CL:0000220!2.30e-15!246;CL:0002321!6.19e-15!248;CL:0000055!1.70e-11!180;CL:0000115!9.46e-10!35;CL:0002139!2.51e-09!24;CL:0000183!1.48e-08!59;CL:0000680!1.95e-08!57;CL:0000056!1.95e-08!57;CL:0000355!1.95e-08!57;CL:0000213!2.64e-08!57;CL:0000215!2.64e-08!57;CL:0000066!3.21e-08!254;CL:0000187!7.56e-08!54;CL:0002078!1.54e-07!44;CL:0000192!1.59e-07!42;CL:0000514!1.59e-07!42;CL:0000071!1.93e-07!18;CL:0002546!1.93e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.52e-09;24!CL:0000115;1.81e-08;36!CL:0000071;1.94e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.42e-16,121;CL:0002321,2.28e-15,250;CL:0000115,5.53e-10,36;CL:0002139,2.51e-09,24;CL:0000680,1.22e-08,58;CL:0000056,1.22e-08,58;CL:0000355,1.22e-08,58;CL:0000213,1.59e-08,58;CL:0000215,1.59e-08,58;CL:0000066,4.50e-08,253;CL:0000187,4.77e-08,55;CL:0002078,9.19e-08,45;CL:0000192,9.96e-08,43;CL:0000514,9.96e-08,43;CL:0000071,1.93e-07,18;CL:0002546,1.93e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.94e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.62e-17!84;UBERON:0000055!5.23e-17!69;UBERON:0000475!6.92e-17!365;UBERON:0000468!7.77e-17!659;UBERON:0002100!4.46e-16!216;UBERON:0002049!7.16e-16!79;UBERON:0007798!7.16e-16!79;UBERON:0001981!1.13e-14!60;UBERON:0007500!1.13e-14!60;UBERON:0004537!1.13e-14!60;UBERON:0006965!1.13e-14!60;UBERON:0003914!2.36e-14!118;UBERON:0003104!4.13e-13!238;UBERON:0009142!4.13e-13!238;UBERON:0005256!2.26e-12!143;UBERON:0000490!2.53e-12!138;UBERON:0000467!4.73e-12!625;UBERON:0000480!7.05e-12!626;UBERON:0001009!7.62e-12!113;UBERON:0000483!4.42e-11!309;UBERON:0004111!7.80e-11!241;UBERON:0000119!8.75e-11!312;UBERON:0000486!9.19e-11!82;UBERON:0004535!9.65e-11!110;UBERON:0002385!1.77e-10!63;UBERON:0001015!1.77e-10!63;UBERON:0000383!1.77e-10!63;UBERON:0000481!2.22e-10!347;UBERON:0001134!3.00e-10!61;UBERON:0002036!3.00e-10!61;UBERON:0003082!3.00e-10!61;UBERON:0000914!3.17e-10!83;UBERON:0002329!3.17e-10!83;UBERON:0003077!3.17e-10!83;UBERON:0003059!3.17e-10!83;UBERON:0007282!3.17e-10!83;UBERON:0009618!3.17e-10!83;UBERON:0007285!3.17e-10!83;UBERON:0000477!3.93e-10!286;UBERON:0004290!7.55e-10!70;UBERON:0003102!1.16e-09!95;UBERON:0003103!4.66e-09!69;UBERON:0009569!1.17e-08!113;UBERON:0001637!1.53e-08!42;UBERON:0003509!1.53e-08!42;UBERON:0004572!1.53e-08!42;UBERON:0000926!6.40e-08!448;UBERON:0004120!6.40e-08!448;UBERON:0006603!6.40e-08!448;UBERON:0000487!1.61e-07!22;UBERON:0001986!1.93e-07!18;UBERON:0004638!1.93e-07!18;UBERON:0004852!1.93e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;8.15e-08;65!UBERON:0007500;8.33e-08;56!UBERON:0001981;8.33e-08;56!UBERON:0004537;8.33e-08;56!UBERON:0000487;1.61e-07;22!UBERON:0004638;1.94e-07;18!UBERON:0001986;1.94e-07;18!UBERON:0004852;1.94e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,4.22e-17,83;UBERON:0000055,1.39e-16,68;UBERON:0002049,1.83e-15,78;UBERON:0007798,1.83e-15,78;UBERON:0002100,3.09e-15,199;UBERON:0007500,2.96e-14,59;UBERON:0001981,2.96e-14,59;UBERON:0004537,2.96e-14,59;UBERON:0006965,2.96e-14,59;UBERON:0003914,3.87e-14,117;UBERON:0000490,1.65e-12,148;UBERON:0005256,3.02e-12,122;UBERON:0003104,3.55e-12,160;UBERON:0009142,3.55e-12,160;UBERON:0007503,3.68e-12,78;UBERON:0001009,1.65e-11,112;UBERON:0000483,4.11e-11,306;UBERON:0003102,4.71e-11,99;UBERON:0000486,5.72e-11,83;UBERON:0000119,8.16e-11,309;UBERON:0002385,1.09e-10,64;UBERON:0001015,1.09e-10,64;UBERON:0000383,1.09e-10,64;UBERON:0001134,1.85e-10,62;UBERON:0002036,1.85e-10,62;UBERON:0003082,1.85e-10,62;UBERON:0004535,2.03e-10,109;UBERON:0004111,2.31e-10,240;UBERON:0002329,4.71e-10,71;UBERON:0003059,4.71e-10,71;UBERON:0007282,4.71e-10,71;UBERON:0004290,4.71e-10,71;UBERON:0009618,4.71e-10,71;UBERON:0003077,8.41e-10,72;UBERON:0007285,8.41e-10,72;UBERON:0007524,9.63e-10,73;UBERON:0003103,7.39e-09,68;UBERON:0001637,1.53e-08,42;UBERON:0003509,1.53e-08,42;UBERON:0004572,1.53e-08,42;UBERON:0009569,2.44e-08,112;UBERON:0000487,1.61e-07,22;UBERON:0004638,1.93e-07,18;UBERON:0001986,1.93e-07,18;UBERON:0004852,1.93e-07,18;UBERON:0001008,5.42e-07,48 | |||
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| ||
|short_description=p1@HSPB1 | |||
}} | }} |
Latest revision as of 13:16, 19 September 2015
Short description: | p1@HSPB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSPB1_5end |
Coexpression cluster: | C4699_Mesenchymal_Urothelial_vagina_Renal_MCF7_salivary_skeletal |
Association with transcript: | 0bp_to_ENST00000432276, ENST00000447574_5end |
EntrezGene: | HSPB1 |
HGNC: | 5246 |
UniProt: | B4DL87F8WE04 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.42e-16 | 121 |
embryonic cell | 2.28e-15 | 250 |
endothelial cell | 5.53e-10 | 36 |
endothelial cell of vascular tree | 2.51e-09 | 24 |
muscle precursor cell | 1.22e-08 | 58 |
myoblast | 1.22e-08 | 58 |
multi-potent skeletal muscle stem cell | 1.22e-08 | 58 |
lining cell | 1.59e-08 | 58 |
barrier cell | 1.59e-08 | 58 |
epithelial cell | 4.50e-08 | 253 |
muscle cell | 4.77e-08 | 55 |
meso-epithelial cell | 9.19e-08 | 45 |
smooth muscle cell | 9.96e-08 | 43 |
smooth muscle myoblast | 9.96e-08 | 43 |
blood vessel endothelial cell | 1.93e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.93e-07 | 18 |