FFCP PHASE1:Hg19::chr9:134152544..134152548,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr9:134152544..134152548,- to FFCP PHASE1:Hg19::chr9:134152544..134152548,-: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:134152544..134152548,- | |||
|description=CAGE_peak_at_chr9:134152544..134152548,- | |||
|id=chr9:134152544..134152548,- | |||
|ontology_enrichment_celltype=CL:0000037!3.94e-27!172;CL:0000566!3.94e-27!172;CL:0000988!1.53e-26!182;CL:0002032!4.17e-23!165;CL:0000837!4.17e-23!165;CL:0002087!1.15e-16!119;CL:0000738!5.14e-15!140;CL:0002031!2.23e-13!124;CL:0000763!1.53e-12!112;CL:0000049!1.53e-12!112;CL:0000791!5.42e-12!18;CL:0000789!5.42e-12!18;CL:0002420!5.42e-12!18;CL:0002419!5.42e-12!18;CL:0000790!5.42e-12!18;CL:0000838!4.58e-11!52;CL:0000542!9.72e-11!53;CL:0000051!9.72e-11!53;CL:0000084!2.04e-10!25;CL:0000827!2.04e-10!25;CL:0000624!1.40e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002188;1.78e-12;5!CL:1000746;3.58e-09;7!CL:1000612;3.58e-09;7!CL:0002262;2.15e-08;2!CL:1000398;2.15e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,1.69e-12,5;CL:1000746,3.44e-09,7;CL:1000612,3.44e-09,7;CL:0002262,1.61e-08,2;CL:1000398,1.61e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0010227;6.92e-16;1!UBERON:0004140;1.78e-15;1 | |||
|ontology_enrichment_disease=DOID:8692!3.35e-17!31;DOID:1240!8.80e-17!39;DOID:2531!1.50e-13!51;DOID:0060083!1.50e-13!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;6.92e-16;1!UBERON:0000353;3.49e-09;15!UBERON:0000074;3.58e-09;7!UBERON:0001229;3.58e-09;7!UBERON:0002081;1.34e-08;2!UBERON:0001281;2.15e-08;2!UBERON:0003497;2.15e-08;2!UBERON:0003909;2.15e-08;2!UBERON:0003835;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,6.44e-16,1;UBERON:0000353,3.03e-09,15;UBERON:0010532,3.44e-09,7;UBERON:0000074,3.44e-09,7;UBERON:0001229,3.44e-09,7;UBERON:0001230,3.44e-09,7;UBERON:0003220,3.44e-09,7;UBERON:0005749,3.44e-09,7;UBERON:0004199,3.44e-09,7;UBERON:0004209,3.44e-09,7;UBERON:0004198,3.44e-09,7;UBERON:0002081,1.29e-08,2;UBERON:0010227,1.29e-08,2;UBERON:0001281,1.61e-08,2;UBERON:0003497,1.61e-08,2;UBERON:0003909,1.61e-08,2;UBERON:0003835,1.61e-08,2;UBERON:0005103,3.77e-08,8;UBERON:0000083,3.77e-08,8;UBERON:0009201,3.77e-08,8;UBERON:0006553,3.77e-08,8;UBERON:0003074,3.77e-08,8;UBERON:0003060,3.77e-08,8;UBERON:0000058,2.08e-07,19;UBERON:0000080,2.44e-07,9;UBERON:0002120,2.44e-07,9;UBERON:0004875,2.44e-07,9;UBERON:0005721,2.44e-07,9;UBERON:0005754,2.44e-07,9;UBERON:0007297,2.44e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314843125254717,0.786728553697808,0,0.77408061658038,0,0,0,0,0.142169232487422,0.587200878669695,0.553995408531877,0.601633342410425,0,0.223915474239924,0,0.257575567634187,1.01778767145695,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0.334372990781356,0.651844533267181,0.473447805734733,0,0.222820913770347,0.883817722424512,0.664601683750863,0.541607727530031,0.512365278902701,0.260118695119756,0.164437904603676,1.10540007114339,0.289803085735052,0.741432815810302,0.267540828089713,1.04535523804977,0.113309342697566,0,0,1.01207876807801,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.431831832204279,3.08454505380579,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.280797178113459,1.36940807419915,0.47003968731907,2.50634477090067,0.169291777801603,0.321176150207399,0.403599414382095,0,0.343505344755765,0.307240764308458,0.223676107892416,0.834245708559542,0.19538809540204,0,0,0.811367035427949,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0.784250137270958,1.00692952185506,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.858452096273142,0,1.94832070211506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314843125254717,0.786728553697808,0,0.77408061658038,0,0,0,0,0.142169232487422,0.587200878669695,0.553995408531877,0.601633342410425,0,0.223915474239924,0,0.257575567634187,1.01778767145695,0,0.242584061187816,0.232429036905685,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0.16072558669708,0,0.39783335439818,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0.822405995998037,0.334372990781356,0.651844533267181,0.473447805734733,0,0.222820913770347,0.883817722424512,0.664601683750863,0.541607727530031,0.512365278902701,0.260118695119756,0.164437904603676,1.10540007114339,0.289803085735052,0.741432815810302,0.267540828089713,1.04535523804977,0.113309342697566,0,0,1.01207876807801,0,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0.132957960518865,0.238490624305342,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.197030760201927,0.646882724578552,0.77005821767849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0.862856803274467,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0.431831832204279,3.08454505380579,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0.199579371432817,0,0,0,0.280797178113459,1.36940807419915,0.47003968731907,2.50634477090067,0.169291777801603,0.321176150207399,0.403599414382095,0,0.343505344755765,0.307240764308458,0.223676107892416,0.834245708559542,0.19538809540204,0,0,0.811367035427949,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0.498635045700469,0,0.784250137270958,1.00692952185506,0,0.158936578980379,0,0,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0.858452096273142,0,1.94832070211506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85878130549347,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0.109940516745429,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.606229585745915,0.267964130156178,0,0,0,0,0.193766729508018,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr9:134152544..134152548,- | |||
}} | }} |
Latest revision as of 23:40, 31 July 2015
Short description: | p@chr9:134152544..134152548, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:134152544..134152548, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 1.69e-12 | 5 |
glomerular cell | 3.44e-09 | 7 |
kidney corpuscule cell | 3.44e-09 | 7 |
endothelial cell of sinusoid | 1.61e-08 | 2 |
endothelial cell of hepatic sinusoid | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 6.44e-16 | 1 |
parenchyma | 3.03e-09 | 15 |
primitive nephron | 3.44e-09 | 7 |
renal glomerulus | 3.44e-09 | 7 |
renal corpuscle | 3.44e-09 | 7 |
glomerular capsule | 3.44e-09 | 7 |
metanephric mesenchyme | 3.44e-09 | 7 |
glomerular tuft | 3.44e-09 | 7 |
S-shaped body | 3.44e-09 | 7 |
renal vesicle | 3.44e-09 | 7 |
comma-shaped body | 3.44e-09 | 7 |
cardiac atrium | 1.29e-08 | 2 |
future cardiac atrium | 1.29e-08 | 2 |
hepatic sinusoid | 1.61e-08 | 2 |
abdomen blood vessel | 1.61e-08 | 2 |
sinusoid | 1.61e-08 | 2 |
abdominal segment blood vessel | 1.61e-08 | 2 |
mesonephric epithelium | 3.77e-08 | 8 |
mesonephric tubule | 3.77e-08 | 8 |
nephric duct | 3.77e-08 | 8 |
renal duct | 3.77e-08 | 8 |
mesonephric duct | 3.77e-08 | 8 |
pronephric duct | 3.77e-08 | 8 |
duct | 2.08e-07 | 19 |
mesonephros | 2.44e-07 | 9 |
pronephros | 2.44e-07 | 9 |
nephrogenic cord | 2.44e-07 | 9 |
pronephric mesoderm | 2.44e-07 | 9 |
rostral part of nephrogenic cord | 2.44e-07 | 9 |
presumptive pronephric mesoderm | 2.44e-07 | 9 |