FFCP PHASE1:Hg19::chrM:5984..6024,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrM:5984..6024,+ to FFCP PHASE1:Hg19::chrM:5984..6024,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=129bp_to_uc011mfh.1_5end | |||
|cluster_id=chrM:5984..6024,+ | |||
|coexpression_cluster_id=C180 | |||
|description=CAGE_peak_7_at_uc011mfh.1_5end | |||
|id=chrM:5984..6024,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.76e-07;82 | |||
|ontology_enrichment_disease=DOID:14566!6.67e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,7.01e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.27e-21!115;UBERON:0001049!1.64e-19!57;UBERON:0005068!1.64e-19!57;UBERON:0006241!1.64e-19!57;UBERON:0007135!1.64e-19!57;UBERON:0002616!1.11e-15!59;UBERON:0003080!1.06e-14!42;UBERON:0002780!3.24e-14!41;UBERON:0001890!3.24e-14!41;UBERON:0006240!3.24e-14!41;UBERON:0000955!5.78e-14!69;UBERON:0006238!5.78e-14!69;UBERON:0002020!2.83e-13!34;UBERON:0003528!2.83e-13!34;UBERON:0002346!1.43e-12!90;UBERON:0001893!2.63e-12!34;UBERON:0002791!4.39e-12!33;UBERON:0001017!4.52e-12!82;UBERON:0003075!5.32e-12!86;UBERON:0007284!5.32e-12!86;UBERON:0001869!5.58e-12!32;UBERON:0002619!2.62e-11!22;UBERON:0005743!4.29e-11!86;UBERON:0000073!8.50e-11!94;UBERON:0001016!8.50e-11!94;UBERON:0001950!4.25e-10!20;UBERON:0000956!9.34e-09!25;UBERON:0000203!9.34e-09!25;UBERON:0003056!1.44e-08!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.95e-11;22!UBERON:0003528;2.49e-11;34!UBERON:0002020;2.49e-11;34!UBERON:0002791;2.95e-11;32!UBERON:0001869;3.88e-11;32!UBERON:0002780;7.63e-11;41!UBERON:0001890;7.63e-11;41!UBERON:0000073;8.39e-11;53!UBERON:0002616;8.39e-11;53!UBERON:0001893;1.15e-10;34!UBERON:0001950;3.28e-10;20!UBERON:0000956;5.57e-09;25!UBERON:0000203;5.57e-09;25!UBERON:0007023;6.86e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.25e-20,114;UBERON:0001049,4.87e-19,56;UBERON:0005068,4.87e-19,56;UBERON:0006241,4.87e-19,56;UBERON:0007135,4.87e-19,56;UBERON:0000073,1.09e-18,53;UBERON:0002616,1.09e-18,53;UBERON:0002780,3.11e-14,41;UBERON:0001890,3.11e-14,41;UBERON:0003080,3.11e-14,41;UBERON:0006240,3.11e-14,41;UBERON:0002346,1.01e-13,86;UBERON:0000955,1.20e-13,68;UBERON:0006238,1.20e-13,68;UBERON:0003528,2.72e-13,34;UBERON:0002020,2.72e-13,34;UBERON:0003075,3.77e-13,82;UBERON:0007284,3.77e-13,82;UBERON:0001893,2.54e-12,34;UBERON:0002791,4.08e-12,32;UBERON:0001869,5.39e-12,32;UBERON:0001017,8.90e-12,81;UBERON:0001016,1.93e-11,89;UBERON:0002619,2.54e-11,22;UBERON:0001950,4.13e-10,20;UBERON:0010371,7.17e-10,104;UBERON:0000956,9.12e-09,25;UBERON:0000203,9.12e-09,25;UBERON:0003056,1.17e-08,61;UBERON:0011216,7.67e-07,223 | |||
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| ||
|short_description=p7@uc011mfh.1 | |||
}} | }} |
Latest revision as of 04:16, 1 August 2015
Short description: | p7@uc011mfh.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_uc011mfh.1_5end |
Coexpression cluster: | C180_skeletal_heart_Hepatocyte_acute_occipital_hippocampus_middle |
Association with transcript: | 129bp_to_uc011mfh.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.25e-20 | 114 |
neural tube | 4.87e-19 | 56 |
neural rod | 4.87e-19 | 56 |
future spinal cord | 4.87e-19 | 56 |
neural keel | 4.87e-19 | 56 |
regional part of nervous system | 1.09e-18 | 53 |
regional part of brain | 1.09e-18 | 53 |
regional part of forebrain | 3.11e-14 | 41 |
forebrain | 3.11e-14 | 41 |
anterior neural tube | 3.11e-14 | 41 |
future forebrain | 3.11e-14 | 41 |
neurectoderm | 1.01e-13 | 86 |
brain | 1.20e-13 | 68 |
future brain | 1.20e-13 | 68 |
brain grey matter | 2.72e-13 | 34 |
gray matter | 2.72e-13 | 34 |
neural plate | 3.77e-13 | 82 |
presumptive neural plate | 3.77e-13 | 82 |
telencephalon | 2.54e-12 | 34 |
regional part of telencephalon | 4.08e-12 | 32 |
cerebral hemisphere | 5.39e-12 | 32 |
central nervous system | 8.90e-12 | 81 |
nervous system | 1.93e-11 | 89 |
regional part of cerebral cortex | 2.54e-11 | 22 |
neocortex | 4.13e-10 | 20 |
ecto-epithelium | 7.17e-10 | 104 |
cerebral cortex | 9.12e-09 | 25 |
pallium | 9.12e-09 | 25 |
pre-chordal neural plate | 1.17e-08 | 61 |
organ system subdivision | 7.67e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 7.01e-07 | 239 |