FFCP PHASE1:Mm9::chr10:126625832..126625862,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:126625832..126625862,- to FFCP PHASE1:Mm9::chr10:126625832..126625862,-: NSchange) |
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(6 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1873 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:126625832..126625862,- | |||
|description=CAGE_peak_at_chr10:126625832..126625862,- | |||
|id=chr10:126625832..126625862,- | |||
|ontology_enrichment_celltype=CL:0000393!2.85e-14!39;CL:0000211!2.85e-14!39;CL:0000055!3.63e-13!50;CL:0000540!3.33e-11!33;CL:0000047!3.33e-11!33;CL:0000031!3.33e-11!33;CL:0000404!3.33e-11!33;CL:0002319!3.72e-11!43;CL:0000221!4.11e-11!44;CL:0000133!4.11e-11!44;CL:0000117!5.13e-09!23;CL:0000337!5.13e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,2.54e-14,39;CL:0000211,2.54e-14,39;CL:0000540,3.05e-11,33;CL:0000047,3.05e-11,33;CL:0000031,3.05e-11,33;CL:0000404,3.05e-11,33;CL:0002319,3.41e-11,43;CL:0000221,3.77e-11,44;CL:0000133,3.77e-11,44;CL:0000117,4.80e-09,23;CL:0000337,4.80e-09,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.13e-27!73;UBERON:0005743!3.13e-27!73;UBERON:0000073!1.02e-25!75;UBERON:0001016!1.02e-25!75;UBERON:0004121!1.21e-21!102;UBERON:0000924!1.21e-21!102;UBERON:0006601!1.21e-21!102;UBERON:0001049!1.68e-20!52;UBERON:0005068!1.68e-20!52;UBERON:0006241!1.68e-20!52;UBERON:0007135!1.68e-20!52;UBERON:0000955!3.39e-20!50;UBERON:0006238!3.39e-20!50;UBERON:0002616!1.35e-19!49;UBERON:0000033!6.71e-19!63;UBERON:0002346!1.00e-18!71;UBERON:0003075!1.00e-18!71;UBERON:0007284!1.00e-18!71;UBERON:0003080!2.01e-15!40;UBERON:0003056!2.96e-15!49;UBERON:0002780!7.24e-15!39;UBERON:0001890!7.24e-15!39;UBERON:0006240!7.24e-15!39;UBERON:0002020!1.80e-14!34;UBERON:0002791!2.88e-12!29;UBERON:0003528!2.88e-12!29;UBERON:0001893!2.88e-12!29;UBERON:0000956!1.67e-10!21;UBERON:0001869!1.67e-10!21;UBERON:0000203!1.67e-10!21;UBERON:0000153!3.44e-10!94;UBERON:0007811!1.37e-08!86;UBERON:0002619!1.94e-08!17;UBERON:0002021!3.70e-07!10;UBERON:0000411!3.70e-07!10;UBERON:0001950!3.70e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.47e-27,73;UBERON:0001016,8.20e-26,75;UBERON:0004121,6.55e-23,95;UBERON:0000924,6.55e-23,95;UBERON:0006601,6.55e-23,95;UBERON:0000073,4.24e-22,54;UBERON:0001049,1.41e-20,52;UBERON:0005068,1.41e-20,52;UBERON:0006241,1.41e-20,52;UBERON:0007135,1.41e-20,52;UBERON:0002346,1.70e-20,64;UBERON:0003075,1.70e-20,64;UBERON:0007284,1.70e-20,64;UBERON:0010371,2.10e-18,73;UBERON:0000955,2.79e-18,47;UBERON:0006238,2.79e-18,47;UBERON:0002616,1.08e-17,46;UBERON:0003080,1.77e-15,40;UBERON:0003056,2.61e-15,49;UBERON:0002780,6.41e-15,39;UBERON:0001890,6.41e-15,39;UBERON:0006240,6.41e-15,39;UBERON:0002020,1.60e-14,34;UBERON:0010314,4.60e-14,92;UBERON:0003528,2.61e-12,29;UBERON:0002791,2.61e-12,29;UBERON:0001893,2.61e-12,29;UBERON:0000956,1.54e-10,21;UBERON:0001869,1.54e-10,21;UBERON:0000203,1.54e-10,21;UBERON:0002619,1.82e-08,17;UBERON:0002021,3.52e-07,10;UBERON:0000411,3.52e-07,10;UBERON:0001950,3.52e-07,10 | |||
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| ||
|short_description=p@chr10:126625832..126625862,- | |||
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Latest revision as of 00:54, 4 August 2015
Short description: | p@chr10:126625832..126625862, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:126625832..126625862, - |
Coexpression cluster: | MCL_coexpression_mm9:1873 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 2.54e-14 | 39 |
electrically active cell | 2.54e-14 | 39 |
neuron | 3.05e-11 | 33 |
neuronal stem cell | 3.05e-11 | 33 |
neuroblast | 3.05e-11 | 33 |
electrically signaling cell | 3.05e-11 | 33 |
neural cell | 3.41e-11 | 43 |
ectodermal cell | 3.77e-11 | 44 |
neurectodermal cell | 3.77e-11 | 44 |
CNS neuron (sensu Vertebrata) | 4.80e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.80e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.47e-27 | 73 |
nervous system | 8.20e-26 | 75 |
ectoderm-derived structure | 6.55e-23 | 95 |
ectoderm | 6.55e-23 | 95 |
presumptive ectoderm | 6.55e-23 | 95 |
regional part of nervous system | 4.24e-22 | 54 |
neural tube | 1.41e-20 | 52 |
neural rod | 1.41e-20 | 52 |
future spinal cord | 1.41e-20 | 52 |
neural keel | 1.41e-20 | 52 |
neurectoderm | 1.70e-20 | 64 |
neural plate | 1.70e-20 | 64 |
presumptive neural plate | 1.70e-20 | 64 |
ecto-epithelium | 2.10e-18 | 73 |
brain | 2.79e-18 | 47 |
future brain | 2.79e-18 | 47 |
regional part of brain | 1.08e-17 | 46 |
anterior neural tube | 1.77e-15 | 40 |
pre-chordal neural plate | 2.61e-15 | 49 |
regional part of forebrain | 6.41e-15 | 39 |
forebrain | 6.41e-15 | 39 |
future forebrain | 6.41e-15 | 39 |
gray matter | 1.60e-14 | 34 |
structure with developmental contribution from neural crest | 4.60e-14 | 92 |
brain grey matter | 2.61e-12 | 29 |
regional part of telencephalon | 2.61e-12 | 29 |
telencephalon | 2.61e-12 | 29 |
cerebral cortex | 1.54e-10 | 21 |
cerebral hemisphere | 1.54e-10 | 21 |
pallium | 1.54e-10 | 21 |
regional part of cerebral cortex | 1.82e-08 | 17 |
occipital lobe | 3.52e-07 | 10 |
visual cortex | 3.52e-07 | 10 |
neocortex | 3.52e-07 | 10 |