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FFCP PHASE1:Mm9::chr10:42894259..42894282,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr10:42894259..42894282,-
|DHSsupport=NA
|short_description=p4@Sobp
|DPIdataset=NA
|description=CAGE_peak_4_at_Sobp_5end
|association_with_transcript=53bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end
|EntrezGene=109205
|EntrezGene=109205
|HGNC=
|HGNC=
|MCL_coexpression_id=2
|TSSclassifier=NA
|UniProt=Q0P5V2
|UniProt=Q0P5V2
|association_with_transcript=53bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end
|cluster_id=chr10:42894259..42894282,-
|description=CAGE_peak_4_at_Sobp_5end
|id=chr10:42894259..42894282,-
|ontology_enrichment_celltype=CL:0000117!3.20e-13!23;CL:0000337!3.20e-13!23;CL:0000540!4.21e-11!33;CL:0000047!4.21e-11!33;CL:0000031!4.21e-11!33;CL:0000404!4.21e-11!33;CL:0000393!1.63e-08!39;CL:0000211!1.63e-08!39;CL:0000221!5.92e-08!44;CL:0000133!5.92e-08!44;CL:0002319!6.29e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,8.36e-17,23;CL:0000337,8.36e-17,23;CL:0000540,8.20e-13,33;CL:0000047,8.20e-13,33;CL:0000031,8.20e-13,33;CL:0000404,8.20e-13,33;CL:0000393,4.29e-10,39;CL:0000211,4.29e-10,39;CL:0002319,4.87e-08,43;CL:0000221,1.22e-07,44;CL:0000133,1.22e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.14e-23!73;UBERON:0005743!3.14e-23!73;UBERON:0001049!1.44e-22!52;UBERON:0005068!1.44e-22!52;UBERON:0006241!1.44e-22!52;UBERON:0007135!1.44e-22!52;UBERON:0000073!2.16e-22!75;UBERON:0001016!2.16e-22!75;UBERON:0000033!2.85e-22!63;UBERON:0002346!1.97e-21!71;UBERON:0003075!1.97e-21!71;UBERON:0007284!1.97e-21!71;UBERON:0000955!3.40e-21!50;UBERON:0006238!3.40e-21!50;UBERON:0004121!1.12e-20!102;UBERON:0000924!1.12e-20!102;UBERON:0006601!1.12e-20!102;UBERON:0002616!1.30e-20!49;UBERON:0002020!7.83e-19!34;UBERON:0003056!1.08e-18!49;UBERON:0003080!1.84e-17!40;UBERON:0002780!6.53e-17!39;UBERON:0001890!6.53e-17!39;UBERON:0006240!6.53e-17!39;UBERON:0002791!6.94e-16!29;UBERON:0003528!6.94e-16!29;UBERON:0001893!6.94e-16!29;UBERON:0000956!5.74e-12!21;UBERON:0001869!5.74e-12!21;UBERON:0000203!5.74e-12!21;UBERON:0000153!2.31e-11!94;UBERON:0007811!5.12e-11!86;UBERON:0002619!1.04e-09!17;UBERON:0002021!2.06e-08!10;UBERON:0000411!2.06e-08!10;UBERON:0001950!2.06e-08!10;UBERON:0000025!5.81e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.90e-26,54;UBERON:0001017,2.24e-25,73;UBERON:0001049,5.35e-25,52;UBERON:0005068,5.35e-25,52;UBERON:0006241,5.35e-25,52;UBERON:0007135,5.35e-25,52;UBERON:0002346,1.55e-24,64;UBERON:0003075,1.55e-24,64;UBERON:0007284,1.55e-24,64;UBERON:0001016,4.51e-24,75;UBERON:0002020,2.07e-23,34;UBERON:0004121,2.05e-22,95;UBERON:0000924,2.05e-22,95;UBERON:0006601,2.05e-22,95;UBERON:0010371,1.95e-21,73;UBERON:0000955,3.04e-21,47;UBERON:0006238,3.04e-21,47;UBERON:0002616,1.59e-20,46;UBERON:0003056,4.38e-20,49;UBERON:0003528,1.45e-19,29;UBERON:0002791,1.45e-19,29;UBERON:0001893,1.45e-19,29;UBERON:0003080,2.42e-19,40;UBERON:0002780,1.21e-18,39;UBERON:0001890,1.21e-18,39;UBERON:0006240,1.21e-18,39;UBERON:0010314,5.13e-18,92;UBERON:0000956,1.90e-14,21;UBERON:0001869,1.90e-14,21;UBERON:0000203,1.90e-14,21;UBERON:0002619,1.64e-11,17;UBERON:0002021,1.61e-10,10;UBERON:0000411,1.61e-10,10;UBERON:0001950,1.61e-10,10
|phase1_expression=1.60148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0,2.57880095944881,0,7.48570905180512,8.46385566835253,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,0,1.15265491596466,5.39185984004084,5.8052553482627,6.73039876324422,7.42692559449889,6.40518768759679,4.28717797252339,4.79227355091182,5.51531271966013,3.30347642998166,6.89511625660014,6.29786786350598,7.64940468835124,6.58711033937349,10.4182674111352,2.79182999001381,4.50210088025344,4.73674568108111,8.54422897873636,5.26775218956681,5.77838282058432,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,1.26399978118577,0.170430322578058,0.259786004602869,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0,0.608930956624282,0.461230994512117,0.60289056221049,0.823120949949934,0.251333182659351,0,0.433798070759735,0,4.20593809863264,3.5334642953663,3.87900202508178,0,11.1256702864388,10.0534419270458,0.510914110417183,0,0,0,5.69204429738326,5.94750783664214,3.64397621127307,13.210648334613,14.5757810678288,4.57133698031032,6.32740925964255,0.305518091550949,0.995255764880744,0.252722758433675,1.89397670297827,0.260240885925407,0.919608417733892,1.44049703844279,1.65775299619287,2.9255694635071,3.71529788826064,1.40552586839593,4.13925393182425,0.215567992932842,0.756424320671277,1.05570674498369,1.7535658594206,1.11218899690239,2.43776516565517,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0.414251545071004,0,0.36012412292203,0.946978942340841,0.983821158737019,0.462801338662135,1.39520366850245,1.07309360559848,1.40118410840603,0.822799249567402,1.31333971263276,2.26992666728396,1.90059983652932,1.3173006917463,1.07365135008297,15.5614561937454,17.0821656549612,0,0,0.213288250535234,0.696710015581316,0.77320476793256,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.754005626400808,0.198956472041151,0.779856348476481,0,0.432276099749388,0,0,0.456994050438915,1.1270773567308,0.407302655690628,0,0.350679099451593,0.442655759869801,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,4.81651769963376,3.7507739709505,0,4.79694761688309,0.315508219416257,1.17131623288992,0.430846795465598,0,0.668396022247182,0.283076530788832,1.61924280669958,1.16902343164525,1.58115111178609,5.78378369559253,0.851640511249612,0.534196811001766,1.14020871547503,0.659880491890142,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.70219802876894,0.720244376125241,0.905510786479282,0.857348140126369,1.24138163549592,1.42695054081656,1.48094118541909,1.522324745573,0.23467170806371,0,0,2.80306630000516,1.13025098687134,0.542816324353403,0.358117032009409,0.492422699235184,0,4.45020724825223,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.809186078308924,1.1571483801547,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.388902376688095,1.54991788173277,0.844780627453891,0.938857909166032,1.69265700297135,2.83120229949419,1.93267296660805,1.72818003754719,0.316011120628178,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,4.30787728868902,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,0.643105137237198,0,32.1908550291728,18.8733346967943,22.9158205375759,15.9823459579629,17.1270629942661,18.8848474347425,18.2256075062588,18.9134905354173,15.8599843144472,16.5683299760582,0.93408612825759,3.19219898720825,1.36586884603307,1.70174701947806,2.51535795153579,3.67687016900028,2.66696073361938,4.94484137373346,2.88827288632634,3.28506375292937,4.05566879824384,3.39527414494937,4.775716880964,3.84150914429216,3.4461281373368,4.28664322154766,3.1288768005111,2.12200142510076,5.35711671044299,2.64958056241915,2.05721551431249,3.37204031702741,1.1921809497366,3.92435324907287,3.76437521661322,3.29996970777538,2.56099162021882,3.6829759601298,3.25929873230068,2.24456908663095,1.54225523561426,4.43270170690036,2.86461730218783,4.02835787083512,2.12197272079256,6.49507502638659,1.40358965067245,3.00819475667618,2.67803664896381,2.20591419119516,2.55054619182464
|phase1_expression=1.60148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0.782391344348039,0.218025156380447,0.219686182734472,0.388859798148567,0.419959264876088,0,0,0,0,0,2.57880095944881,0,7.48570905180512,8.46385566835253,6.33831403506179,0.338844532069132,0.889294796111139,0,0,0,0,1.15265491596466,5.39185984004084,5.8052553482627,6.73039876324422,7.42692559449889,6.40518768759679,4.28717797252339,4.79227355091182,5.51531271966013,3.30347642998166,6.89511625660014,6.29786786350598,7.64940468835124,6.58711033937349,10.4182674111352,2.79182999001381,4.50210088025344,4.73674568108111,8.54422897873636,5.26775218956681,5.77838282058432,0.227178579999552,0.226714680320357,0.289864488701678,0,0,0,0,0,1.26399978118577,0.170430322578058,0.259786004602869,0,0.845060518660083,1.28326477414318,2.54805239706646,0,0,0,0,0.5709193985953,0.258937883647172,0.445326417194474,0,0.608930956624282,0.461230994512117,0.60289056221049,0.823120949949934,0.251333182659351,0,0.433798070759735,0,4.20593809863264,3.5334642953663,3.87900202508178,0,11.1256702864388,10.0534419270458,0.510914110417183,0,0,0,5.69204429738326,5.94750783664214,3.64397621127307,13.210648334613,14.5757810678288,4.57133698031032,6.32740925964255,0.305518091550949,0.995255764880744,0.252722758433675,1.89397670297827,0.260240885925407,0.919608417733892,1.44049703844279,1.65775299619287,2.9255694635071,3.71529788826064,1.40552586839593,4.13925393182425,0.215567992932842,0.756424320671277,1.05570674498369,1.7535658594206,1.11218899690239,2.43776516565517,0.61734640922383,0.398068533636986,0,0,0.284163499395593,0.414251545071004,0,0.36012412292203,0.946978942340841,0.983821158737019,0.462801338662135,1.39520366850245,1.07309360559848,1.40118410840603,0.822799249567402,1.31333971263276,2.26992666728396,1.90059983652932,1.3173006917463,1.07365135008297,15.5614561937454,17.0821656549612,0,0,0.213288250535234,0.696710015581316,0.77320476793256,0,0.22237804384487,0.190225626112559,0.949058123089023,0,0.754005626400808,0.198956472041151,0.779856348476481,0,0.432276099749388,0,0,0.456994050438915,1.1270773567308,0.407302655690628,0,0.350679099451593,0.442655759869801,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0.189491411770485,0.325929952884052,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.478364305972461,0.327726629431476,0.172684981865896,0.289298117163023,0,0,0,0,4.81651769963376,3.7507739709505,0,4.79694761688309,0.315508219416257,1.17131623288992,0.430846795465598,0,0.668396022247182,0.283076530788832,1.61924280669958,1.16902343164525,1.58115111178609,5.78378369559253,0.851640511249612,0.534196811001766,1.14020871547503,0.659880491890142,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.614870295887855,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,1.70219802876894,0.720244376125241,0.905510786479282,0.857348140126369,1.24138163549592,1.42695054081656,1.48094118541909,1.522324745573,0.23467170806371,0,0,2.80306630000516,1.13025098687134,0.542816324353403,0.358117032009409,0.492422699235184,0,4.45020724825223,0,0,0,0.188368457004691,0,0,0,0,0.138199973804424,0,0.158167996790568,0.406638934253697,0.324016022465404,0.209088296014469,0.436725127492355,0.809186078308924,1.1571483801547,0.26175594198403,0.259229946583586,0,0,0.299033092087958,0.165458490457098,0.388902376688095,1.54991788173277,0.844780627453891,0.938857909166032,1.69265700297135,2.83120229949419,1.93267296660805,1.72818003754719,0.316011120628178,0.608175645870493,0.205421914329655,0.51968329191118,0.358053391334963,0,0,0.147689527174577,0,0,0,0,0,0,4.30787728868902,0,0,0,0.386379188064381,0.375364950902364,0.549454872801795,0.643105137237198,0,32.1908550291728,18.8733346967943,22.9158205375759,15.9823459579629,17.1270629942661,18.8848474347425,18.2256075062588,18.9134905354173,15.8599843144472,16.5683299760582,0.93408612825759,3.19219898720825,1.36586884603307,1.70174701947806,2.51535795153579,3.67687016900028,2.66696073361938,4.94484137373346,2.88827288632634,3.28506375292937,4.05566879824384,3.39527414494937,4.775716880964,3.84150914429216,3.4461281373368,4.28664322154766,3.1288768005111,2.12200142510076,5.35711671044299,2.64958056241915,2.05721551431249,3.37204031702741,1.1921809497366,3.92435324907287,3.76437521661322,3.29996970777538,2.56099162021882,3.6829759601298,3.25929873230068,2.24456908663095,1.54225523561426,4.43270170690036,2.86461730218783,4.02835787083512,2.12197272079256,6.49507502638659,1.40358965067245,3.00819475667618,2.67803664896381,2.20591419119516,2.55054619182464
|short_description=p4@Sobp
}}
}}

Latest revision as of 00:49, 26 September 2015

Short description:p4@Sobp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Sobp_5end
Coexpression cluster:MCL_coexpression_mm9:2
Association with transcript: 53bp_to_ENSMUST00000040275, NM_175407, uc007ezf.1, uc007ezg.1_5end
EntrezGene:Sobp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Sobp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.58
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C37.49
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.39
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F55.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.29
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.79
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.59
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D68.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.78
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F54.21
bone (os femoris), neonate N16.CNhs11225.1525-43A63.53
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B211.13
cerebellum, neonate N30.CNhs11135.1395-42I210.05
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A45.69
corpus striatum, adult.CNhs10487.19-21D85.95
corpus striatum, neonate N00.CNhs11226.630-43F13.64
cortex, adult.CNhs10473.12-14D513.21
cortex, neonate N30.CNhs11107.1392-42F214.58
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B26.33
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.66
eyeball, neonate N00.CNhs11207.633-15C62.93
eyeball, neonate N01.CNhs11140.1532-43E73.72
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A24.14
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G12.27
heart, neonate N20.CNhs11127.821-26I61.90
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.07
hippocampus, adult.CNhs10478.13-16E815.56
hippocampus, neonate N00.CNhs11228.627-43G117.08
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.75
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.46
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.44
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.48
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.82
medulla oblongata, neonate N30.CNhs11200.1396-42A33.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C24.80
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.91
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.24
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.48
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C32.80
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.45
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.81
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I51.55
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.94
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D92.83
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B44.31
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A132.19
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A218.87
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A322.92
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D715.98
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A618.23
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A718.91
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A815.86
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A916.57
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H21.37
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B12.52
whole body, embryo E16.CNhs10514.453-14F23.68
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.29
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.40
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.12
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.36
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.65
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.19
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.92
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.26
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.43
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.03
whole body, embryo E17.5.CNhs10513.490-9F92.12
whole body, embryo E17.CNhs10517.475-3I56.50
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B42.55





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)8.36e-1723
neuroblast (sensu Vertebrata)8.36e-1723
neuron8.20e-1333
neuronal stem cell8.20e-1333
neuroblast8.20e-1333
electrically signaling cell8.20e-1333
electrically responsive cell4.29e-1039
electrically active cell4.29e-1039
neural cell4.87e-0843
ectodermal cell1.22e-0744
neurectodermal cell1.22e-0744

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.90e-2654
central nervous system2.24e-2573
neural tube5.35e-2552
neural rod5.35e-2552
future spinal cord5.35e-2552
neural keel5.35e-2552
neurectoderm1.55e-2464
neural plate1.55e-2464
presumptive neural plate1.55e-2464
nervous system4.51e-2475
gray matter2.07e-2334
ectoderm-derived structure2.05e-2295
ectoderm2.05e-2295
presumptive ectoderm2.05e-2295
ecto-epithelium1.95e-2173
brain3.04e-2147
future brain3.04e-2147
regional part of brain1.59e-2046
pre-chordal neural plate4.38e-2049
brain grey matter1.45e-1929
regional part of telencephalon1.45e-1929
telencephalon1.45e-1929
anterior neural tube2.42e-1940
regional part of forebrain1.21e-1839
forebrain1.21e-1839
future forebrain1.21e-1839
structure with developmental contribution from neural crest5.13e-1892
cerebral cortex1.90e-1421
cerebral hemisphere1.90e-1421
pallium1.90e-1421
regional part of cerebral cortex1.64e-1117
occipital lobe1.61e-1010
visual cortex1.61e-1010
neocortex1.61e-1010
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