FFCP PHASE1:Mm9::chr11:70577930..70577985,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:70577930..70577985,+ to FFCP PHASE1:Mm9::chr11:70577930..70577985,+: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=193043 | |EntrezGene=193043 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1301 | |||
|TSSclassifier=NA | |||
|UniProt=A2CF98,Q8BLB0 | |UniProt=A2CF98,Q8BLB0 | ||
|association_with_transcript=0bp_to_NM_177565,uc007jwo.1_5end | |||
|cluster_id=chr11:70577930..70577985,+ | |||
|description=CAGE_peak_1_at_Zfp3_5end | |||
|id=chr11:70577930..70577985,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.81e-08!33;CL:0000047!5.81e-08!33;CL:0000031!5.81e-08!33;CL:0000404!5.81e-08!33;CL:0000117!5.25e-07!23;CL:0000337!5.25e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,5.79e-08,33;CL:0000047,5.79e-08,33;CL:0000031,5.79e-08,33;CL:0000404,5.79e-08,33;CL:0000117,5.23e-07,23;CL:0000337,5.23e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.14e-16!73;UBERON:0005743!1.14e-16!73;UBERON:0002346!2.57e-16!71;UBERON:0003075!2.57e-16!71;UBERON:0007284!2.57e-16!71;UBERON:0000033!2.72e-16!63;UBERON:0004121!3.15e-16!102;UBERON:0000924!3.15e-16!102;UBERON:0006601!3.15e-16!102;UBERON:0000073!3.25e-15!75;UBERON:0001016!3.25e-15!75;UBERON:0001049!1.30e-14!52;UBERON:0005068!1.30e-14!52;UBERON:0006241!1.30e-14!52;UBERON:0007135!1.30e-14!52;UBERON:0000955!1.82e-13!50;UBERON:0006238!1.82e-13!50;UBERON:0002616!7.22e-13!49;UBERON:0003056!8.28e-13!49;UBERON:0000468!1.95e-12!333;UBERON:0003080!2.44e-11!40;UBERON:0002780!8.59e-11!39;UBERON:0001890!8.59e-11!39;UBERON:0006240!8.59e-11!39;UBERON:0002020!1.54e-09!34;UBERON:0000922!6.58e-09!328;UBERON:0004111!1.37e-08!122;UBERON:0002791!9.91e-08!29;UBERON:0003528!9.91e-08!29;UBERON:0001893!9.91e-08!29;UBERON:0000025!1.97e-07!114;UBERON:0007811!6.13e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,7.66e-19,92;UBERON:0001017,1.13e-16,73;UBERON:0002346,1.30e-16,64;UBERON:0003075,1.30e-16,64;UBERON:0007284,1.30e-16,64;UBERON:0004121,4.00e-16,95;UBERON:0000924,4.00e-16,95;UBERON:0006601,4.00e-16,95;UBERON:0010371,2.19e-15,73;UBERON:0001016,3.22e-15,75;UBERON:0000073,7.59e-15,54;UBERON:0001049,1.28e-14,52;UBERON:0005068,1.28e-14,52;UBERON:0006241,1.28e-14,52;UBERON:0007135,1.28e-14,52;UBERON:0003056,8.22e-13,49;UBERON:0000955,1.16e-12,47;UBERON:0006238,1.16e-12,47;UBERON:0002616,4.53e-12,46;UBERON:0003080,2.42e-11,40;UBERON:0002780,8.54e-11,39;UBERON:0001890,8.54e-11,39;UBERON:0006240,8.54e-11,39;UBERON:0002020,1.53e-09,34;UBERON:0004111,1.41e-08,122;UBERON:0003528,9.87e-08,29;UBERON:0002791,9.87e-08,29;UBERON:0001893,9.87e-08,29;UBERON:0000025,2.03e-07,114 | |||
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| ||
|short_description=p1@Zfp3 | |||
}} | }} |
Latest revision as of 15:08, 25 September 2015
Short description: | p1@Zfp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1301 |
Association with transcript: | 0bp_to_NM_177565, uc007jwo.1_5end |
EntrezGene: | Zfp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 5.79e-08 | 33 |
neuronal stem cell | 5.79e-08 | 33 |
neuroblast | 5.79e-08 | 33 |
electrically signaling cell | 5.79e-08 | 33 |
CNS neuron (sensu Vertebrata) | 5.23e-07 | 23 |
neuroblast (sensu Vertebrata) | 5.23e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 7.66e-19 | 92 |
central nervous system | 1.13e-16 | 73 |
neurectoderm | 1.30e-16 | 64 |
neural plate | 1.30e-16 | 64 |
presumptive neural plate | 1.30e-16 | 64 |
ectoderm-derived structure | 4.00e-16 | 95 |
ectoderm | 4.00e-16 | 95 |
presumptive ectoderm | 4.00e-16 | 95 |
ecto-epithelium | 2.19e-15 | 73 |
nervous system | 3.22e-15 | 75 |
regional part of nervous system | 7.59e-15 | 54 |
neural tube | 1.28e-14 | 52 |
neural rod | 1.28e-14 | 52 |
future spinal cord | 1.28e-14 | 52 |
neural keel | 1.28e-14 | 52 |
pre-chordal neural plate | 8.22e-13 | 49 |
brain | 1.16e-12 | 47 |
future brain | 1.16e-12 | 47 |
regional part of brain | 4.53e-12 | 46 |
anterior neural tube | 2.42e-11 | 40 |
regional part of forebrain | 8.54e-11 | 39 |
forebrain | 8.54e-11 | 39 |
future forebrain | 8.54e-11 | 39 |
gray matter | 1.53e-09 | 34 |
anatomical conduit | 1.41e-08 | 122 |
brain grey matter | 9.87e-08 | 29 |
regional part of telencephalon | 9.87e-08 | 29 |
telencephalon | 9.87e-08 | 29 |
tube | 2.03e-07 | 114 |