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FFCP PHASE1:Mm9::chr15:76648523..76648604,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr15:76648523..76648604,-
|DHSsupport=NA
|short_description=p1@Arhgap39
|DPIdataset=NA
|description=CAGE_peak_1_at_Arhgap39_5end
|association_with_transcript=0bp_to_ENSMUST00000036176,ENSMUST00000077821,ENSMUST00000171141,NM_001168288,NM_198420,uc007wmh.2,uc007wmi.2,uc007wmj.2_5end
|EntrezGene=223666
|EntrezGene=223666
|HGNC=
|HGNC=
|MCL_coexpression_id=593
|TSSclassifier=NA
|UniProt=G3X932,P59281
|UniProt=G3X932,P59281
|association_with_transcript=0bp_to_ENSMUST00000036176,ENSMUST00000077821,ENSMUST00000171141,NM_001168288,NM_198420,uc007wmh.2,uc007wmi.2,uc007wmj.2_5end
|cluster_id=chr15:76648523..76648604,-
|description=CAGE_peak_1_at_Arhgap39_5end
|id=chr15:76648523..76648604,-
|ontology_enrichment_celltype=CL:0000540!1.88e-16!33;CL:0000047!1.88e-16!33;CL:0000031!1.88e-16!33;CL:0000404!1.88e-16!33;CL:0000221!3.76e-16!44;CL:0000133!3.76e-16!44;CL:0002319!1.07e-15!43;CL:0000117!1.22e-11!23;CL:0000337!1.22e-11!23;CL:0000393!8.26e-11!39;CL:0000211!8.26e-11!39;CL:0000055!2.32e-10!50
|ontology_enrichment_celltype_v019_2=CL:0000540,1.88e-16,33;CL:0000047,1.88e-16,33;CL:0000031,1.88e-16,33;CL:0000404,1.88e-16,33;CL:0000221,3.76e-16,44;CL:0000133,3.76e-16,44;CL:0002319,1.07e-15,43;CL:0000117,1.22e-11,23;CL:0000337,1.22e-11,23;CL:0000393,8.26e-11,39;CL:0000211,8.26e-11,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!5.08e-31!75;UBERON:0001016!5.08e-31!75;UBERON:0001017!1.42e-29!73;UBERON:0005743!1.42e-29!73;UBERON:0004121!2.22e-27!102;UBERON:0000924!2.22e-27!102;UBERON:0006601!2.22e-27!102;UBERON:0000033!1.07e-20!63;UBERON:0001049!7.90e-20!52;UBERON:0005068!7.90e-20!52;UBERON:0006241!7.90e-20!52;UBERON:0007135!7.90e-20!52;UBERON:0002346!8.03e-20!71;UBERON:0003075!8.03e-20!71;UBERON:0007284!8.03e-20!71;UBERON:0000955!2.39e-18!50;UBERON:0006238!2.39e-18!50;UBERON:0003056!6.52e-18!49;UBERON:0002616!8.84e-18!49;UBERON:0002020!1.29e-16!34;UBERON:0003080!1.25e-15!40;UBERON:0002780!4.30e-15!39;UBERON:0001890!4.30e-15!39;UBERON:0006240!4.30e-15!39;UBERON:0002791!6.98e-14!29;UBERON:0003528!6.98e-14!29;UBERON:0001893!6.98e-14!29;UBERON:0000153!1.82e-11!94;UBERON:0007811!1.48e-10!86;UBERON:0000956!5.48e-10!21;UBERON:0001869!5.48e-10!21;UBERON:0000203!5.48e-10!21;UBERON:0002619!2.00e-08!17;UBERON:0002021!2.24e-07!10;UBERON:0000411!2.24e-07!10;UBERON:0001950!2.24e-07!10;UBERON:0000010!4.98e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0004121,3.06e-31,95;UBERON:0000924,3.06e-31,95;UBERON:0006601,3.06e-31,95;UBERON:0001016,5.08e-31,75;UBERON:0001017,1.42e-29,73;UBERON:0002346,5.43e-24,64;UBERON:0003075,5.43e-24,64;UBERON:0007284,5.43e-24,64;UBERON:0010371,3.60e-23,73;UBERON:0000073,1.27e-20,54;UBERON:0001049,7.90e-20,52;UBERON:0005068,7.90e-20,52;UBERON:0006241,7.90e-20,52;UBERON:0007135,7.90e-20,52;UBERON:0003056,6.52e-18,49;UBERON:0000955,4.55e-17,47;UBERON:0006238,4.55e-17,47;UBERON:0002020,1.29e-16,34;UBERON:0002616,1.65e-16,46;UBERON:0003080,1.25e-15,40;UBERON:0002780,4.30e-15,39;UBERON:0001890,4.30e-15,39;UBERON:0006240,4.30e-15,39;UBERON:0003528,6.98e-14,29;UBERON:0002791,6.98e-14,29;UBERON:0001893,6.98e-14,29;UBERON:0010314,2.69e-10,92;UBERON:0000956,5.48e-10,21;UBERON:0001869,5.48e-10,21;UBERON:0000203,5.48e-10,21;UBERON:0002619,2.00e-08,17;UBERON:0002021,2.24e-07,10;UBERON:0000411,2.24e-07,10;UBERON:0001950,2.24e-07,10;UBERON:0000010,4.98e-07,11
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9.5186688441775,9.82848601478391,10.4544148007234,10.9181281873089,8.76618251501335,11.075563067195,7.0674104335688,19.0534010738935,13.0481255748254,25.9298751794728,11.8118071374743,8.93475848468327,14.9727415024917,10.8494251721294,10.9821481569006,14.9043693080108,13.150642869239,20.0281347853108,17.6356408202984,19.298010419277,4.4241556887945,8.10900861160657,8.11416561602135,7.27556608675652,8.23522800070415,4.56967115996909,6.25016337503838,7.67985541307802,5.04832249740738,4.64861520595499,5.84791873793675,5.75001496364539,6.06134602334076,4.9088298916259,7.9355634265324,15.3170307828105,3.40912655116008,11.5840385291214,9.07991091951295,6.38120416534019,12.8206136987086,10.0753138167161,9.5298699766719,41.2268845110459,44.191222704689,37.8111038870002,32.995811009988,36.9944560676147,40.0358765616541,39.1513050134447,35.1250538514892,37.1576775367048,42.9741058754011,11.1052461915069,28.7297908848742,16.2196925466427,19.6916440825318,12.9960160829349,13.236732608401,14.0015438515018,16.8948746935893,19.5760717851007,19.7103825175762,20.7853025909997,16.5991180419747,16.1063392848198,17.8630175209585,18.0921727210182,13.8125170472091,18.3097234992872,18.5192851645157,14.835092428919,17.2222736557245,13.0290315906458,14.9079677173843,17.4058418661544,13.3718703301742,15.9985946706062,16.9229215783353,14.451309856949,17.0995312434598,15.8890813199658,16.8342681497322,16.371632501136,16.8442664862214,19.2338590289754,15.3387472774106,15.046715656529,22.4829520144151,14.5037597236153,12.0327790267047,10.9034349279241,8.38247392654159,8.11537424671475
|phase1_expression=18.2569685699465,1.74487703819681,2.27499619694768,10.8887116070459,8.5152274090879,14.4376173844225,11.2134067485852,5.4231795845462,15.0643932702283,24.5767752638093,7.36237263369671,7.17949430958028,14.7232627740837,12.7633787531736,11.3257319017325,11.7435655086099,16.0899231969474,3.3123527362615,5.62169177783529,5.51706547337439,17.9441342218757,6.95036658406197,7.83599367416806,4.63978026100879,2.2940928106717,3.44539178469012,3.01533397311352,4.95583835177545,5.70070258369122,4.78857246543868,6.87364583031445,10.7955214488137,11.0711661765223,47.5445043046316,23.9746844393558,14.7948834369058,21.4377824075488,8.37063261473815,6.2506827561904,5.75876118371178,12.9410927366823,10.9287277593351,14.0798002379035,7.42791226055906,8.11015449756117,9.9115246167308,4.69434806608824,17.8780628231966,10.7646229539891,9.52706505463989,8.9591309840232,15.8127820801469,4.36234775750115,15.9579671242496,13.1076581665561,2.57259436035947,3.15186783932632,3.09403255366465,31.3590514332377,38.0873505075864,41.1990412279016,6.77689064138264,3.55717918444456,15.2982951937838,9.88866362566974,12.7886420690298,20.0732074047331,29.5848095097597,27.788816098672,23.7610451463776,21.0324961351382,38.2772319101097,31.5842013560807,22.9057794531964,25.5907407618691,30.3342199581307,27.5289702498472,24.515968912356,27.9563890526363,36.6643879889939,40.3460508286627,36.4639359389732,23.451371916116,28.138130501584,27.9620793431563,35.0608016713665,29.4709379254143,37.0934897192348,35.4398584799301,43.8315048619356,6.37701875143691,6.88339101585109,0.679971333707751,2.15881276655127,5.84798775702902,3.13618820968135,6.74133216632409,4.09032774187339,3.63700406444016,4.24007489412408,28.1686839553361,5.13305909657271,22.9324715735981,14.2213340630666,3.24736561516821,1.77351905832569,3.0331466700887,7.53613606145796,19.4203412735379,10.984718290797,10.5826049327343,7.61163695780353,8.53277339847416,6.17962826265753,9.8774513993992,6.03199638382442,6.17987419335935,9.39895819979426,9.73071607144862,8.57364304721269,7.06692859073259,7.27312879702833,5.59175283654366,36.5975996264434,24.0863712835473,7.66371165625774,5.99075622529601,6.59893004092748,6.22644112658017,33.4033125872755,31.5675415944852,32.1675141408933,38.5889990826854,36.3115949409069,32.8305110404105,30.0146336675352,9.67473956578005,10.0769646194175,21.9868799837297,45.2449990155919,15.2240918266363,12.644615743841,16.0255295526761,17.3310540511072,30.0040961257356,24.9821754555457,25.1120621820073,20.9549730298603,17.8921434134259,15.8849107340968,18.6508191613786,17.9740500590611,15.8486932058591,13.5818344943645,8.43706759272568,16.5198441459349,8.42655824775882,8.23513302767089,6.25159698670304,8.90640821902658,5.8631514995274,5.76198596675248,11.1270025725049,8.65762619688577,7.71335564436891,9.06882384526591,12.3405764643825,8.05680862333469,9.87359099480883,4.43252153013557,5.26947262048062,5.84799949701329,4.61055242111206,3.48936688776967,66.6619136948283,38.0747065803352,9.25172592354634,7.93351699990633,9.81125952462076,13.4697269679054,15.9795652039396,14.3195302482573,12.2307924114679,8.56015317506516,9.49058123089023,4.44687177754829,12.0640900224129,7.56034593756373,10.5280607044325,13.4822911298133,9.07779809473716,10.3553462092271,13.4664209676688,12.224590849241,25.9227792048085,13.0336849821001,13.7706265889014,12.6945834001477,11.3193401452421,7.82333784291891,6.90794402502049,7.03363834354263,4.44678940630723,7.84171996865642,9.23827277032054,9.219346607779,9.94014594803664,6.75296047306767,6.62027214631691,7.19240343627027,5.5125977103512,6.04035109013779,4.31304619582064,8.93138274404408,6.24075346229121,4.2938409251009,3.76734568396016,1.4473305640901,16.9972934953276,13.6433816474749,13.8520229975722,10.3544502322865,11.4998221661366,10.3853879613926,10.9500074807566,9.75668239288994,10.4039195110086,10.6303051031412,11.799652880654,9.17634562408133,9.15230403889247,9.40218880779825,9.04747703635634,11.4220193601929,5.90117127622843,5.79467167239938,25.3669932180711,28.4824398419054,5.40985319743029,6.5642441073137,29.9732808445444,24.2072021463916,45.6697603193534,39.9077892580762,40.5493586829957,50.3876224804122,23.074209995469,24.2572362066389,31.6230222357219,35.3453448063988,20.5813123551989,16.738166744722,13.0309567482861,24.9104885688529,9.2921596837974,15.0523994416088,8.16273603804828,12.6365403436452,12.4026795009925,12.2974059177571,8.5281336745513,10.9060118843252,11.0514187299264,10.4292130118819,7.37930260024991,8.25084345985495,18.3837387107046,14.7650097105674,17.4634223106719,15.2179294872431,15.2512600932355,15.6964559489822,18.4294903074375,13.700922710157,7.27482294997502,20.9713750155182,5.29268155331909,19.1268053412117,10.333723308538,12.8466530096972,17.9058516004705,23.8004304630339,9.32738677215522,30.5951748317341,10.423123728669,11.144890870014,9.4449208958553,7.72310673719233,10.66214976224,9.37990510146743,7.81900777971734,8.25713568709582,8.29199842826543,6.68269432610579,16.449471666219,19.5186688441775,9.82848601478391,10.4544148007234,10.9181281873089,8.76618251501335,11.075563067195,7.0674104335688,19.0534010738935,13.0481255748254,25.9298751794728,11.8118071374743,8.93475848468327,14.9727415024917,10.8494251721294,10.9821481569006,14.9043693080108,13.150642869239,20.0281347853108,17.6356408202984,19.298010419277,4.4241556887945,8.10900861160657,8.11416561602135,7.27556608675652,8.23522800070415,4.56967115996909,6.25016337503838,7.67985541307802,5.04832249740738,4.64861520595499,5.84791873793675,5.75001496364539,6.06134602334076,4.9088298916259,7.9355634265324,15.3170307828105,3.40912655116008,11.5840385291214,9.07991091951295,6.38120416534019,12.8206136987086,10.0753138167161,9.5298699766719,41.2268845110459,44.191222704689,37.8111038870002,32.995811009988,36.9944560676147,40.0358765616541,39.1513050134447,35.1250538514892,37.1576775367048,42.9741058754011,11.1052461915069,28.7297908848742,16.2196925466427,19.6916440825318,12.9960160829349,13.236732608401,14.0015438515018,16.8948746935893,19.5760717851007,19.7103825175762,20.7853025909997,16.5991180419747,16.1063392848198,17.8630175209585,18.0921727210182,13.8125170472091,18.3097234992872,18.5192851645157,14.835092428919,17.2222736557245,13.0290315906458,14.9079677173843,17.4058418661544,13.3718703301742,15.9985946706062,16.9229215783353,14.451309856949,17.0995312434598,15.8890813199658,16.8342681497322,16.371632501136,16.8442664862214,19.2338590289754,15.3387472774106,15.046715656529,22.4829520144151,14.5037597236153,12.0327790267047,10.9034349279241,8.38247392654159,8.11537424671475
|short_description=p1@Arhgap39
}}
}}

Latest revision as of 01:08, 27 September 2015

Short description:p1@Arhgap39
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Arhgap39_5end
Coexpression cluster:MCL_coexpression_mm9:593
Association with transcript: 0bp_to_ENSMUST00000036176, ENSMUST00000077821, ENSMUST00000171141, NM_001168288, NM_198420, uc007wmh.2, uc007wmi.2, uc007wmj.2_5end
EntrezGene:Arhgap39
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Arhgap39

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I310.89
CD326+ enterocyte, pool2.CNhs13197.11849-124I48.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I714.44
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I811.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E95.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E715.06
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F224.58
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E67.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.18
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E414.72
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E812.76
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A111.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A311.74
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.31
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A45.62
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A65.52
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.94
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.95
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I97.84
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D22.29
GP2+ M cell, pool1.CNhs13228.11845-124H93.45
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I24.96
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C14.79
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C86.87
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I310.80
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G611.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E947.54
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.97
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F614.79
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F721.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G88.37
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H16.25
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G912.94
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H414.08
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D87.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D98.11
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B39.91
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C217.88
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B810.76
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.96
Mouse Astrocytes, donor3.CNhs12107.11633-122C415.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A24.36
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I915.96
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A113.11
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C331.36
Mouse Granule cells, donor2.CNhs12357.11731-123E338.09
Mouse Granule cells, donor3.CNhs12108.11636-122C741.20
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.78
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.30
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E79.89
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C820.07
Mouse Microglia, donor2.CNhs12634.11736-123E829.58
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.79
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.76
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D921.03
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D531.58
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.91
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F225.59
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D630.33
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D327.53
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.52
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D727.96
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D436.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F440.35
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D836.46
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E423.45
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E528.14
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I627.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D635.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F629.47
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E137.09
Mouse Schwann, donor1.CNhs12507.11728-123D935.44
Mouse Schwann, donor2.CNhs12573.11746-123F943.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G36.38
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F63.14
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.74
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.09
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E33.64
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G628.17
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I822.93
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.77
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.54
accessory axillary lymph node, adult.CNhs10475.1063-29H919.42
adrenal gland, adult.CNhs10508.49-24D710.98
adrenal gland, embryo E14.CNhs11038.406-44C510.58
adrenal gland, embryo E16.CNhs11004.1254-43D67.61
adrenal gland, embryo E17.CNhs11043.1263-45I18.53
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C19.88
adrenal gland, neonate N25.CNhs11223.1377-27I36.03
amnion, adult pregnant day17.5.CNhs10488.583-22A86.18
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F58.57
bone (os femoris), neonate N16.CNhs11225.1525-43A67.07
bone (os femoris), neonate N20.CNhs11195.1350-25C37.27
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B236.60
cerebellum, neonate N30.CNhs11135.1395-42I224.09
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.99
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D46.23
corpora quadrigemina, adult.CNhs10501.16-22A433.40
corpus striatum, adult.CNhs10487.19-21D831.57
corpus striatum, neonate N00.CNhs11226.630-43F132.17
cortex, adult.CNhs10473.12-14D538.59
cortex, neonate N30.CNhs11107.1392-42F236.31
diencephalon, adult.CNhs10482.20-12F232.83
diencephalon, neonate N30.CNhs11201.1388-42B230.01
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B19.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.08
epididymis, adult.CNhs10490.58-23B221.99
eyeball, adult.CNhs10484.31-12G445.24
eyeball, embryo E12.CNhs11016.345-16C615.22
eyeball, embryo E14.CNhs10521.399-16E212.64
eyeball, embryo E15.CNhs10593.426-16C916.03
eyeball, embryo E17.CNhs11023.1261-18D417.33
eyeball, neonate N00.CNhs11207.633-15C630.00
eyeball, neonate N01.CNhs11140.1532-43E724.98
eyeball, neonate N02.CNhs11205.1551-44G825.11
eyeball, neonate N16.CNhs11188.777-19A220.95
forelimb, embryo E11.CNhs10596.335-25E217.89
forelimb, embryo E12.CNhs10600.359-14H215.88
forelimb, embryo E13.CNhs10589.384-1E218.65
forelimb, embryo E14.CNhs10577.413-26A817.97
forelimb, embryo E15.CNhs11007.437-20E715.85
forelimb, embryo E17.CNhs10598.1517-43C413.58
forelimb, embryo E18.CNhs11008.1520-43B58.44
gonad, embryo E13.CNhs11044.1564-45I616.52
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C88.43
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D28.24
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.25
heart, embryo E11.CNhs10586.331-24E98.91
heart, embryo E12.CNhs11015.353-12F55.86
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D411.13
heart, embryo E15.CNhs11017.431-16C88.66
heart, embryo E16.CNhs11021.457-17C67.71
heart, embryo E17.CNhs11025.479-18E59.07
heart, embryo E18.CNhs11030.1283-20G312.34
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I29.87
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G15.27
heart, neonate N20.CNhs11127.821-26I65.85
heart, neonate N25.CNhs11196.1351-25D34.61
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E866.66
hippocampus, neonate N00.CNhs11228.627-43G138.07
intestinal mucosa, adult.CNhs10506.860-29I39.25
intestine, adult.CNhs10496.178-9A37.93
intestine, embryo E12.CNhs11019.1251-16I59.81
intestine, embryo E13.CNhs11010.381-16D513.47
intestine, embryo E15.CNhs10602.976-16D815.98
intestine, embryo E16.CNhs10585.463-22H414.32
intestine, embryo E17.CNhs10582.482-18D312.23
intestine, embryo E18.CNhs10526.1289-20F78.56
intestine, neonate N00.CNhs11126.644-26D19.49
intestine, neonate N01.CNhs11192.1322-23E94.45
intestine, neonate N06.CNhs11102.688-20B812.06
intestine, neonate N07.CNhs11095.720-20F27.56
intestine, neonate N10.CNhs11098.755-23A510.53
intestine, neonate N20.CNhs11187.827-18D113.48
intestine, neonate N25.CNhs11121.1352-25E39.08
intestine, neonate N30.CNhs11131.1384-42G110.36
kidney, embryo E14.CNhs10606.411-4I913.47
kidney, embryo E15.CNhs10997.434-16F812.22
kidney, embryo E16.CNhs10584.464-22A525.92
kidney, embryo E17.CNhs11028.483-18I213.03
kidney, embryo E18.CNhs11001.1288-20C713.77
kidney, neonate N00.CNhs11214.646-21G712.69
kidney, neonate N10.CNhs11206.758-6D511.32
kidney, neonate N20.CNhs11113.832-19I17.82
kidney, neonate N25.CNhs11122.1353-25F36.91
kidney, neonate N30.CNhs11203.1385-42H17.03
liver, adult pregnant day01.CNhs10466.508-5B24.45
liver, embryo E12.CNhs10601.355-15F87.84
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E19.22
liver, embryo E15.CNhs10520.433-16D79.94
liver, embryo E16.CNhs10523.462-17F56.75
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F45.51
liver, neonate N03.CNhs11123.1345-25G26.04
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.93
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B117.00
lung, embryo E12.CNhs10522.354-16G213.64
lung, embryo E14.CNhs10604.404-26F813.85
lung, embryo E15.CNhs11020.432-17C510.35
lung, embryo E16.CNhs10998.458-17B611.50
lung, embryo E17.CNhs10605.480-44A610.39
lung, embryo E18.CNhs10583.1287-20I610.95
lung, neonate N00.CNhs11224.640-42C69.76
lung, neonate N06.CNhs11212.683-20E510.40
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E611.80
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C79.15
lung, neonate N30.CNhs11133.1394-42H29.40
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A111.42
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C225.37
medulla oblongata, neonate N30.CNhs11200.1396-42A328.48
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C75.41
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C26.56
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E129.97
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E224.21
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E345.67
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D739.91
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D840.55
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D950.39
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D423.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D524.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D631.62
olfactory brain, adult.CNhs10489.18-22I935.35
ovary, adult.CNhs10507.91-2I720.58
ovary, embryo E18.CNhs11040.505-44H716.74
ovary, neonate N00.CNhs11217.1299-22I413.03
oviduct, adult pregnant day01.CNhs10500.988-6G624.91
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F415.05
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E512.64
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I712.30
pancreas, neonate N00.CNhs11105.645-26G98.53
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D811.05
pancreas, neonate N16.CNhs11136.787-43B610.43
pancreas, neonate N25.CNhs11094.1555-45E27.38
pancreas, neonate N30.CNhs11182.1548-44H58.25
pituitary gland, adult.CNhs10493.21-1G818.38
pituitary gland, embryo E12.CNhs11018.346-16E614.77
pituitary gland, embryo E13.CNhs11009.370-44C717.46
pituitary gland, embryo E14.CNhs11037.398-44A515.22
pituitary gland, embryo E15.CNhs10592.427-16B915.25
pituitary gland, embryo E16.CNhs11036.449-43F615.70
pituitary gland, embryo E17.CNhs11039.1265-44F518.43
pituitary gland, neonate N00.CNhs11190.1308-22E913.70
placenta, adult pregnant day10.CNhs10472.539-13I77.27
placenta, adult pregnant day17.CNhs10464.577-18G320.97
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C319.13
skin, neonate N00.CNhs11124.650-25G410.33
skin, neonate N03.CNhs11215.662-22H312.85
skin, neonate N06.CNhs11097.693-20I517.91
skin, neonate N10.CNhs11108.762-6C423.80
small intestine, neonate N16.CNhs11114.790-21I19.33
spinal cord, adult.CNhs10505.24-13C930.60
spleen, adult.CNhs10465.25-2G210.42
spleen, embryo E16.CNhs11035.461-43C111.14
spleen, embryo E18.CNhs11011.1271-21F29.44
spleen, neonate N10.CNhs11116.752-24D17.72
spleen, neonate N20.CNhs11112.824-19H110.66
spleen, neonate N25.CNhs11099.1354-25G39.38
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C67.82
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.26
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D38.29
stomach, adult.CNhs10503.33-1H66.68
stomach, embryo E12.CNhs10588.356-43E316.45
stomach, embryo E15.CNhs10603.1252-16G819.52
stomach, embryo E16.CNhs11022.459-17D49.83
stomach, embryo E17.CNhs11006.1035-18D510.45
stomach, embryo E18.CNhs10999.1286-20C610.92
stomach, neonate N03.CNhs11193.1340-24B88.77
stomach, neonate N07.CNhs11210.718-18A911.08
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I119.05
submandibular gland, adult.CNhs10469.59-29C113.05
testis, adult.CNhs10504.57-7G525.93
testis, embryo E13.CNhs11031.389-23F511.81
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G514.97
testis, embryo E17.CNhs11029.486-18I510.85
testis, embryo E18.CNhs11027.503-18G510.98
testis, neonate N00.CNhs11189.1300-22B714.90
testis, neonate N07.CNhs11222.726-26I413.15
testis, neonate N10.CNhs11204.763-44D920.03
testis, neonate N20.CNhs11110.839-18H317.64
testis, neonate N30.CNhs11130.1391-42E219.30
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I48.11
thymus, embryo E15.CNhs11005.430-45I28.11
thymus, embryo E16.CNhs11002.456-26C57.28
thymus, embryo E17.CNhs10581.478-18C18.24
thymus, embryo E18.CNhs10595.1273-19G44.57
thymus, neonate N02.CNhs11181.1541-43F86.25
thymus, neonate N03.CNhs11137.2104-43C77.68
thymus, neonate N06.CNhs11197.681-26C45.05
thymus, neonate N07.CNhs11211.713-19D34.65
thymus, neonate N10.CNhs11194.748-24E45.85
thymus, neonate N20.CNhs11186.820-7A25.75
thymus, neonate N25.CNhs11125.1362-25G76.06
thymus, neonate N30.CNhs11132.1393-42G24.91
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H315.32
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.41
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G511.58
urinary bladder, adult.CNhs10481.879-12E49.08
uterus, adult pregnant day19.CNhs10497.590-15F56.38
uterus, adult.CNhs10509.92-27E512.82
vagina, adult.CNhs10502.89-27D510.08
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A141.23
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A244.19
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A436.99
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A540.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.15
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A735.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A837.16
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A942.97
whole body, embryo E11.CNhs11014.324-5I811.11
whole body, embryo E12.CNhs10587.857-27C928.73
whole body, embryo E13.CNhs10512.372-23H216.22
whole body, embryo E14.5.CNhs10578.420-27D219.69
whole body, embryo E14.CNhs10519.395-14B113.00
whole body, embryo E16.CNhs10514.453-14F213.24
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G516.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G519.58
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G519.71
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G516.60
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G517.86
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.09
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G518.52
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G514.84
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.22
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G513.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G517.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G516.92
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G515.89
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G516.83
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G516.84
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G519.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F915.05
whole body, embryo E17.CNhs10517.475-3I522.48
whole body, embryo E18.CNhs10516.493-3B314.50
whole body, neonate N00.CNhs10525.657-19C212.03
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D18.38
whole body, neonate N10.CNhs10518.761-6B48.12





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.88e-1633
neuronal stem cell1.88e-1633
neuroblast1.88e-1633
electrically signaling cell1.88e-1633
ectodermal cell3.76e-1644
neurectodermal cell3.76e-1644
neural cell1.07e-1543
CNS neuron (sensu Vertebrata)1.22e-1123
neuroblast (sensu Vertebrata)1.22e-1123
electrically responsive cell8.26e-1139
electrically active cell8.26e-1139

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure3.06e-3195
ectoderm3.06e-3195
presumptive ectoderm3.06e-3195
nervous system5.08e-3175
central nervous system1.42e-2973
neurectoderm5.43e-2464
neural plate5.43e-2464
presumptive neural plate5.43e-2464
ecto-epithelium3.60e-2373
regional part of nervous system1.27e-2054
neural tube7.90e-2052
neural rod7.90e-2052
future spinal cord7.90e-2052
neural keel7.90e-2052
pre-chordal neural plate6.52e-1849
brain4.55e-1747
future brain4.55e-1747
gray matter1.29e-1634
regional part of brain1.65e-1646
anterior neural tube1.25e-1540
regional part of forebrain4.30e-1539
forebrain4.30e-1539
future forebrain4.30e-1539
brain grey matter6.98e-1429
regional part of telencephalon6.98e-1429
telencephalon6.98e-1429
structure with developmental contribution from neural crest2.69e-1092
cerebral cortex5.48e-1021
cerebral hemisphere5.48e-1021
pallium5.48e-1021
regional part of cerebral cortex2.00e-0817
occipital lobe2.24e-0710
visual cortex2.24e-0710
neocortex2.24e-0710
peripheral nervous system4.98e-0711
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