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FFCP PHASE1:Mm9::chr17:25707623..25707639,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:25707623..25707639,-
|DHSsupport=NA
|short_description=p1@Sox8
|DPIdataset=NA
|description=CAGE_peak_1_at_Sox8_5end
|association_with_transcript=0bp_to_ENSMUST00000025003,ENSMUST00000173447,NM_011447,uc008bay.1,uc008baz.1,uc008bba.1_5end
|EntrezGene=20681
|EntrezGene=20681
|HGNC=
|HGNC=
|MCL_coexpression_id=2197
|TSSclassifier=NA
|UniProt=Q04886,G3UWS3,Q543C3,Q80V52
|UniProt=Q04886,G3UWS3,Q543C3,Q80V52
|association_with_transcript=0bp_to_ENSMUST00000025003,ENSMUST00000173447,NM_011447,uc008bay.1,uc008baz.1,uc008bba.1_5end
|cluster_id=chr17:25707623..25707639,-
|description=CAGE_peak_1_at_Sox8_5end
|id=chr17:25707623..25707639,-
|ontology_enrichment_celltype=CL:0002319!1.32e-14!43;CL:0000221!1.39e-14!44;CL:0000133!1.39e-14!44;CL:0000540!2.45e-13!33;CL:0000047!2.45e-13!33;CL:0000031!2.45e-13!33;CL:0000404!2.45e-13!33;CL:0000117!5.55e-10!23;CL:0000337!5.55e-10!23;CL:0000055!1.71e-09!50;CL:0000393!1.10e-08!39;CL:0000211!1.10e-08!39
|ontology_enrichment_celltype_v019_2=CL:0002319,4.01e-15,43;CL:0000221,4.22e-15,44;CL:0000133,4.22e-15,44;CL:0000540,8.37e-14,33;CL:0000047,8.37e-14,33;CL:0000031,8.37e-14,33;CL:0000404,8.37e-14,33;CL:0000117,2.57e-10,23;CL:0000337,2.57e-10,23;CL:0000393,7.27e-09,39;CL:0000211,7.27e-09,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.95e-28,73;UBERON:0001016,2.36e-27,75;UBERON:0004121,3.37e-27,95;UBERON:0000924,3.37e-27,95;UBERON:0006601,3.37e-27,95;UBERON:0002346,6.49e-23,64;UBERON:0003075,6.49e-23,64;UBERON:0007284,6.49e-23,64;UBERON:0010371,4.29e-21,73;UBERON:0000073,1.23e-19,54;UBERON:0001049,1.95e-18,52;UBERON:0005068,1.95e-18,52;UBERON:0006241,1.95e-18,52;UBERON:0007135,1.95e-18,52;UBERON:0003056,1.30e-15,49;UBERON:0000955,1.78e-15,47;UBERON:0006238,1.78e-15,47;UBERON:0002616,5.47e-15,46;UBERON:0002020,9.78e-15,34;UBERON:0010314,6.29e-13,92;UBERON:0003080,1.61e-12,40;UBERON:0003528,4.73e-12,29;UBERON:0002791,4.73e-12,29;UBERON:0001893,4.73e-12,29;UBERON:0002780,5.35e-12,39;UBERON:0001890,5.35e-12,39;UBERON:0006240,5.35e-12,39;UBERON:0000956,3.71e-09,21;UBERON:0001869,3.71e-09,21;UBERON:0000203,3.71e-09,21;UBERON:0002619,5.77e-08,17;UBERON:0003076,6.32e-07,12;UBERON:0003057,6.32e-07,12
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|short_description=p1@Sox8
}}
}}

Latest revision as of 02:24, 26 September 2015

Short description:p1@Sox8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sox8_5end
Coexpression cluster:MCL_coexpression_mm9:2197
Association with transcript: 0bp_to_ENSMUST00000025003, ENSMUST00000173447, NM_011447, uc008bay.1, uc008baz.1, uc008bba.1_5end
EntrezGene:Sox8
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p1@Sox8

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G726.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5110.63
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6103.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I776.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I883.63
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F25.62
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.52
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A322.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D147.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D239.92
GP2+ M cell, pool1.CNhs13228.11845-124H9112.55
GP2+ M cell, pool2.CNhs13231.11846-124I1119.32
GP2+ M cell, pool3.CNhs13240.11847-124I2141.35
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C849.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.95
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C292.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B89.45
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.82
Mouse Astrocytes, donor3.CNhs12107.11633-122C438.81
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C321.85
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C719.65
Mouse Meningeal cells, donor1.CNhs12132.11716-123C63.05
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C8145.91
Mouse Microglia, donor2.CNhs12634.11736-123E8219.39
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D524.68
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F524.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D927.34
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1131.40
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5125.23
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D284.40
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F295.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6104.79
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3109.01
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F387.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D798.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D413.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D814.06
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E499.67
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E560.78
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I675.02
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D679.84
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F671.61
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.16
Mouse Schwann, donor1.CNhs12507.11728-123D91.82
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.45
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.19
adrenal gland, embryo E14.CNhs11038.406-44C510.76
adrenal gland, embryo E16.CNhs11004.1254-43D65.78
adrenal gland, embryo E17.CNhs11043.1263-45I12.08
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C16.23
adrenal gland, neonate N25.CNhs11223.1377-27I31.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H12.46
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F524.10
bone (os femoris), neonate N16.CNhs11225.1525-43A66.85
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B236.30
cerebellum, neonate N30.CNhs11135.1395-42I238.75
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A481.34
corpus striatum, adult.CNhs10487.19-21D894.25
corpus striatum, neonate N00.CNhs11226.630-43F1120.50
cortex, adult.CNhs10473.12-14D555.80
cortex, neonate N30.CNhs11107.1392-42F255.49
diencephalon, adult.CNhs10482.20-12F279.38
diencephalon, neonate N30.CNhs11201.1388-42B297.34
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.99
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.36
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G49.68
eyeball, embryo E12.CNhs11016.345-16C67.42
eyeball, embryo E14.CNhs10521.399-16E217.01
eyeball, embryo E15.CNhs10593.426-16C927.37
eyeball, embryo E17.CNhs11023.1261-18D471.43
eyeball, neonate N00.CNhs11207.633-15C6110.90
eyeball, neonate N01.CNhs11140.1532-43E7144.13
eyeball, neonate N02.CNhs11205.1551-44G8105.04
eyeball, neonate N16.CNhs11188.777-19A222.25
forelimb, embryo E11.CNhs10596.335-25E25.82
forelimb, embryo E12.CNhs10600.359-14H215.88
forelimb, embryo E13.CNhs10589.384-1E213.37
forelimb, embryo E14.CNhs10577.413-26A824.11
forelimb, embryo E15.CNhs11007.437-20E717.52
forelimb, embryo E17.CNhs10598.1517-43C424.03
forelimb, embryo E18.CNhs11008.1520-43B511.94
gonad, embryo E13.CNhs11044.1564-45I67.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.89
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E857.41
hippocampus, neonate N00.CNhs11228.627-43G137.35
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I514.93
intestine, embryo E13.CNhs11010.381-16D511.15
intestine, embryo E15.CNhs10602.976-16D89.15
intestine, embryo E16.CNhs10585.463-22H46.05
intestine, embryo E17.CNhs10582.482-18D34.23
intestine, embryo E18.CNhs10526.1289-20F73.42
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E92.47
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A51.56
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I910.81
kidney, embryo E15.CNhs10997.434-16F84.46
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G73.37
kidney, neonate N10.CNhs11206.758-6D51.39
kidney, neonate N20.CNhs11113.832-19I11.18
kidney, neonate N25.CNhs11122.1353-25F30.63
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.90
liver, embryo E15.CNhs10520.433-16D71.22
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.55
lung, embryo E12.CNhs10522.354-16G24.93
lung, embryo E14.CNhs10604.404-26F81.79
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.98
lung, neonate N06.CNhs11212.683-20E50.95
lung, neonate N07.CNhs11111.715-19A31.55
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A40.98
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B61.48
mammary gland, adult pregnant day19.CNhs10476.588-5H23.04
medulla oblongata, adult.CNhs10477.17-12C283.49
medulla oblongata, neonate N30.CNhs11200.1396-42A3112.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E127.45
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.47
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E348.47
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D732.26
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D839.88
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D945.01
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D437.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D543.84
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D666.41
olfactory brain, adult.CNhs10489.18-22I965.23
ovary, adult.CNhs10507.91-2I72.41
ovary, embryo E18.CNhs11040.505-44H74.99
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.12
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.38
pancreas, neonate N00.CNhs11105.645-26G92.33
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E65.40
pituitary gland, embryo E13.CNhs11009.370-44C75.04
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B95.32
pituitary gland, embryo E16.CNhs11036.449-43F64.10
pituitary gland, embryo E17.CNhs11039.1265-44F55.59
pituitary gland, neonate N00.CNhs11190.1308-22E910.66
placenta, adult pregnant day10.CNhs10472.539-13I79.86
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C32.31
skin, neonate N00.CNhs11124.650-25G41.78
skin, neonate N03.CNhs11215.662-22H33.08
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C42.13
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C9132.02
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H62.86
stomach, embryo E12.CNhs10588.356-43E315.34
stomach, embryo E15.CNhs10603.1252-16G87.93
stomach, embryo E16.CNhs11022.459-17D44.97
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C63.49
stomach, neonate N03.CNhs11193.1340-24B81.35
stomach, neonate N07.CNhs11210.718-18A92.40
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G546.22
testis, embryo E13.CNhs11031.389-23F532.45
testis, embryo E15.CNhs11034.443-27C530.78
testis, embryo E16.CNhs11033.470-26G558.34
testis, embryo E17.CNhs11029.486-18I558.12
testis, embryo E18.CNhs11027.503-18G571.81
testis, neonate N00.CNhs11189.1300-22B779.92
testis, neonate N07.CNhs11222.726-26I497.91
testis, neonate N10.CNhs11204.763-44D978.96
testis, neonate N20.CNhs11110.839-18H336.24
testis, neonate N30.CNhs11130.1391-42E225.06
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.16
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.61
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.71
thymus, neonate N20.CNhs11186.820-7A21.07
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B43.85
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.99
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.84
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F51.13
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A194.31
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A291.14
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A383.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D747.09
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A441.79
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A564.96
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A654.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A744.13
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A877.94
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A958.51
whole body, embryo E11.CNhs11014.324-5I811.31
whole body, embryo E12.CNhs10587.857-27C917.56
whole body, embryo E13.CNhs10512.372-23H215.88
whole body, embryo E14.5.CNhs10578.420-27D217.02
whole body, embryo E14.CNhs10519.395-14B125.15
whole body, embryo E16.CNhs10514.453-14F214.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.39
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G514.44
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G515.67
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G516.37
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G519.05
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G516.22
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.92
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G517.81
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G513.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G513.35
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.21
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G514.05
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G513.72
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.17
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.55
whole body, embryo E17.5.CNhs10513.490-9F916.40
whole body, embryo E17.CNhs10517.475-3I535.72
whole body, embryo E18.CNhs10516.493-3B316.14
whole body, neonate N00.CNhs10525.657-19C214.40
whole body, neonate N01.CNhs10576.659-23C622.19
whole body, neonate N06.CNhs10515.692-21D123.60
whole body, neonate N10.CNhs10518.761-6B427.59





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell4.01e-1543
ectodermal cell4.22e-1544
neurectodermal cell4.22e-1544
neuron8.37e-1433
neuronal stem cell8.37e-1433
neuroblast8.37e-1433
electrically signaling cell8.37e-1433
CNS neuron (sensu Vertebrata)2.57e-1023
neuroblast (sensu Vertebrata)2.57e-1023
electrically responsive cell7.27e-0939
electrically active cell7.27e-0939

Uber anatomy
Ontology termp-valuen
central nervous system2.95e-2873
nervous system2.36e-2775
ectoderm-derived structure3.37e-2795
ectoderm3.37e-2795
presumptive ectoderm3.37e-2795
neurectoderm6.49e-2364
neural plate6.49e-2364
presumptive neural plate6.49e-2364
ecto-epithelium4.29e-2173
regional part of nervous system1.23e-1954
neural tube1.95e-1852
neural rod1.95e-1852
future spinal cord1.95e-1852
neural keel1.95e-1852
pre-chordal neural plate1.30e-1549
brain1.78e-1547
future brain1.78e-1547
regional part of brain5.47e-1546
gray matter9.78e-1534
structure with developmental contribution from neural crest6.29e-1392
anterior neural tube1.61e-1240
brain grey matter4.73e-1229
regional part of telencephalon4.73e-1229
telencephalon4.73e-1229
regional part of forebrain5.35e-1239
forebrain5.35e-1239
future forebrain5.35e-1239
cerebral cortex3.71e-0921
cerebral hemisphere3.71e-0921
pallium3.71e-0921
regional part of cerebral cortex5.77e-0817
posterior neural tube6.32e-0712
chordal neural plate6.32e-0712
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