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FFCP PHASE1:Mm9::chr17:29375034..29375111,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:29375034..29375111,-
|DHSsupport=NA
|short_description=p1@Cpne5
|DPIdataset=NA
|description=CAGE_peak_1_at_Cpne5_5end
|association_with_transcript=-292bp_to_ENSMUST00000024805,ENSMUST00000057091_5end
|EntrezGene=240058
|EntrezGene=240058
|HGNC=
|HGNC=
|MCL_coexpression_id=2201
|TSSclassifier=NA
|UniProt=Q8JZW4,E9Q7V9
|UniProt=Q8JZW4,E9Q7V9
|association_with_transcript=-292bp_to_ENSMUST00000024805,ENSMUST00000057091_5end
|cluster_id=chr17:29375034..29375111,-
|description=CAGE_peak_1_at_Cpne5_5end
|id=chr17:29375034..29375111,-
|ontology_enrichment_celltype=CL:0000117!3.38e-12!23;CL:0000337!3.38e-12!23;CL:0000540!4.33e-07!33;CL:0000047!4.33e-07!33;CL:0000031!4.33e-07!33;CL:0000404!4.33e-07!33
|ontology_enrichment_celltype_v019_2=CL:0000117,9.00e-14,23;CL:0000337,9.00e-14,23;CL:0000540,3.48e-07,33;CL:0000047,3.48e-07,33;CL:0000031,3.48e-07,33;CL:0000404,3.48e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.98e-17!52;UBERON:0005068!1.98e-17!52;UBERON:0006241!1.98e-17!52;UBERON:0007135!1.98e-17!52;UBERON:0002346!4.69e-17!71;UBERON:0003075!4.69e-17!71;UBERON:0007284!4.69e-17!71;UBERON:0003056!1.12e-16!49;UBERON:0002020!3.71e-16!34;UBERON:0003080!4.06e-16!40;UBERON:0000033!5.39e-16!63;UBERON:0000955!7.51e-16!50;UBERON:0006238!7.51e-16!50;UBERON:0002780!1.82e-15!39;UBERON:0001890!1.82e-15!39;UBERON:0006240!1.82e-15!39;UBERON:0002616!3.28e-15!49;UBERON:0001017!2.43e-14!73;UBERON:0005743!2.43e-14!73;UBERON:0000073!8.28e-14!75;UBERON:0001016!8.28e-14!75;UBERON:0004121!1.71e-13!102;UBERON:0000924!1.71e-13!102;UBERON:0006601!1.71e-13!102;UBERON:0002791!1.39e-12!29;UBERON:0003528!1.39e-12!29;UBERON:0001893!1.39e-12!29;UBERON:0000956!4.11e-08!21;UBERON:0001869!4.11e-08!21;UBERON:0000203!4.11e-08!21;UBERON:0002021!9.28e-08!10;UBERON:0000411!9.28e-08!10;UBERON:0001950!9.28e-08!10;UBERON:0002619!1.05e-07!17;UBERON:0000025!1.83e-07!114;UBERON:0000153!2.84e-07!94;UBERON:0000468!3.66e-07!333;UBERON:0004111!5.98e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.24e-21,54;UBERON:0001049,3.86e-20,52;UBERON:0005068,3.86e-20,52;UBERON:0006241,3.86e-20,52;UBERON:0007135,3.86e-20,52;UBERON:0002020,9.07e-19,34;UBERON:0003080,1.08e-18,40;UBERON:0003056,4.17e-18,49;UBERON:0002346,5.77e-18,64;UBERON:0003075,5.77e-18,64;UBERON:0007284,5.77e-18,64;UBERON:0002780,6.14e-18,39;UBERON:0001890,6.14e-18,39;UBERON:0006240,6.14e-18,39;UBERON:0010314,9.94e-18,92;UBERON:0000955,1.69e-16,47;UBERON:0006238,1.69e-16,47;UBERON:0001017,2.60e-16,73;UBERON:0002616,8.89e-16,46;UBERON:0001016,2.80e-15,75;UBERON:0010371,8.38e-15,73;UBERON:0003528,1.24e-14,29;UBERON:0002791,1.24e-14,29;UBERON:0001893,1.24e-14,29;UBERON:0004121,3.01e-12,95;UBERON:0000924,3.01e-12,95;UBERON:0006601,3.01e-12,95;UBERON:0000956,1.82e-09,21;UBERON:0001869,1.82e-09,21;UBERON:0000203,1.82e-09,21;UBERON:0002619,5.00e-09,17;UBERON:0002021,1.11e-08,10;UBERON:0000411,1.11e-08,10;UBERON:0001950,1.11e-08,10;UBERON:0000025,1.81e-07,114
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,2.57836046138721,8.9019242778223,8.99284664762456,12.0427966666174,0,0,0,0,0,0,0,1.03689612308478,1.35005938331691,1.68259969081106,21.7094748146891,18.3320888989839,3.79721477566358,4.12135525378416,9.19218786610021,4.40463523997555,6.00130489000382,8.1411462625809,10.8146755938759,6.31264740856627,7.8137005583514,3.62937898701795,7.31591393041184,6.72312290217964,29.1682299618931,25.7692742246376,16.9623495701024,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0,2.94925055502431,2.43572382649713,1.15307748628029,0.60289056221049,1.29347577849275,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,12.1330417917906,43.4625572677695,21.2355855070741,19.9897968221118,16.1100738118108,8.10373373782284,17.8465389374533,3.86989582631202,0.497627882440372,7.07623723614289,0.841767423545896,1.95180664444056,2.29902104433473,3.24111833649629,3.0140963567143,2.38127747029647,1.0249097622788,1.87403449119458,0.776110112217047,0.646703978798527,1.32374256117473,2.99116911078713,1.7535658594206,2.78047249225598,2.78601733217733,2.05782136407943,4.37875387000685,0,0,0,9.52778553663309,3.51789089971644,5.94204802821349,7.10234206755631,4.9191057936851,3.08534225774756,3.25547522650571,1.60964040839772,1.63471479314037,2.63295759861569,1.14917224855367,0.648550476366846,0.877199924551994,1.3173006917463,0.671032093801859,4.20579897128254,4.32199371992995,0,0.264450566663544,3.19932375802851,2.78684006232526,3.47942145569652,1.81515172161008,1.77902435075896,1.52180500890047,0,0.988193728344065,0.251335208800269,0.994782360205754,0.779856348476481,0,0,0,2.84501851429623,1.37098215131675,0,1.4255592949172,1.16371492300575,1.1221731182451,0.252946148497029,0,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,3.60033682363921,2.44447464663039,1.01847051465113,0.938760993154008,0.670025029767263,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,2.56880943980467,1.87538698547525,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0,0.283076530788832,0,0,0,13.4954952897159,0.567760340833074,5.34196811001766,5.04949573996086,1.64970122972535,0,2.42780636154981,1.51161778482376,0.188605079755898,0.590603785761546,0,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,4.14140516272013,4.39819524861365,3.64372959553707,1.59606210278046,2.85390108163313,2.96188237083818,1.522324745573,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,2.09903754704677,1.08563264870681,0.358117032009409,0.656563598980245,0,3.15223013417866,0,3.09580301944834,0,0,0,0,0.169978429993855,0,0,0,3.63786392618306,2.64315307264903,2.59212817972323,2.29997125615916,1.52853794622324,0.674321731924103,0.578574190077352,0,0,0.621339313086926,0.56369293868419,2.24274819065968,2.48187735685646,8.94475466382619,6.71631082084202,5.74450826668646,4.69428954583016,2.3436789271911,3.67007705489988,1.93267296660805,1.72818003754719,0,1.01362607645082,0.616265742988964,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,1.46521299413812,0,0.501572104035363,12.4245405375755,5.9842280745933,10.8850147553485,10.4830441229649,11.6464028361009,14.3524840504043,13.5004500046361,16.6618845192962,10.4222754066367,23.8169743405837,0.62272408550506,1.59609949360412,2.90247129782028,2.43106717068294,2.72497111416377,4.22840069435032,2.44471400581777,2.67845574410562,4.81378814387723,2.02157769411038,2.5347929989024,2.45214243801899,3.27745276144588,2.75308155340938,2.5845961030026,2.85776214769844,3.24476112645595,2.70072908649187,1.64834360321323,1.91358596174717,3.42869252385415,3.19456451086807,1.90748951957857,2.61623549938191,1.12931256498397,2.45382362885862,3.10977553883713,3.15683653725411,2.44447404922551,2.24456908663095,3.08451047122853,3.44765688314472,2.45538625901814,3.25367366490529,2.50778594275484,2.74791635731741,3.50897412668113,2.14871054048298,2.10417165275728,0.882365676478062,0
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57181818634493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0,2.57836046138721,8.9019242778223,8.99284664762456,12.0427966666174,0,0,0,0,0,0,0,1.03689612308478,1.35005938331691,1.68259969081106,21.7094748146891,18.3320888989839,3.79721477566358,4.12135525378416,9.19218786610021,4.40463523997555,6.00130489000382,8.1411462625809,10.8146755938759,6.31264740856627,7.8137005583514,3.62937898701795,7.31591393041184,6.72312290217964,29.1682299618931,25.7692742246376,16.9623495701024,0.075726193333184,0.151143120213571,0,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0,0,0,0.79928715803342,0,0,2.94925055502431,2.43572382649713,1.15307748628029,0.60289056221049,1.29347577849275,0.125666591329675,0.247194967734374,0,0,0.161766849947409,0,0.484875253135222,0,0,0,0,0,0,0,12.1330417917906,43.4625572677695,21.2355855070741,19.9897968221118,16.1100738118108,8.10373373782284,17.8465389374533,3.86989582631202,0.497627882440372,7.07623723614289,0.841767423545896,1.95180664444056,2.29902104433473,3.24111833649629,3.0140963567143,2.38127747029647,1.0249097622788,1.87403449119458,0.776110112217047,0.646703978798527,1.32374256117473,2.99116911078713,1.7535658594206,2.78047249225598,2.78601733217733,2.05782136407943,4.37875387000685,0,0,0,9.52778553663309,3.51789089971644,5.94204802821349,7.10234206755631,4.9191057936851,3.08534225774756,3.25547522650571,1.60964040839772,1.63471479314037,2.63295759861569,1.14917224855367,0.648550476366846,0.877199924551994,1.3173006917463,0.671032093801859,4.20579897128254,4.32199371992995,0,0.264450566663544,3.19932375802851,2.78684006232526,3.47942145569652,1.81515172161008,1.77902435075896,1.52180500890047,0,0.988193728344065,0.251335208800269,0.994782360205754,0.779856348476481,0,0,0,2.84501851429623,1.37098215131675,0,1.4255592949172,1.16371492300575,1.1221731182451,0.252946148497029,0,0,0,0,0.333690211432188,0.393117990226406,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0.369506380333209,3.60033682363921,2.44447464663039,1.01847051465113,0.938760993154008,0.670025029767263,0,0.195133647857799,0,0,0.159454768657487,0.491589944147214,0.518054945597687,0.289298117163023,0,0,0,0.275936746304732,2.56880943980467,1.87538698547525,0,0,0.315508219416257,0.780877488593277,0.646270193198397,0,0,0.283076530788832,0,0,0,13.4954952897159,0.567760340833074,5.34196811001766,5.04949573996086,1.64970122972535,0,2.42780636154981,1.51161778482376,0.188605079755898,0.590603785761546,0,0.258428293168221,0.363533729477506,0,0,0,0,1.02131881726136,4.14140516272013,4.39819524861365,3.64372959553707,1.59606210278046,2.85390108163313,2.96188237083818,1.522324745573,0.469343416127421,0.21183207086382,0.220528398054962,0.16488625294148,2.09903754704677,1.08563264870681,0.358117032009409,0.656563598980245,0,3.15223013417866,0,3.09580301944834,0,0,0,0,0.169978429993855,0,0,0,3.63786392618306,2.64315307264903,2.59212817972323,2.29997125615916,1.52853794622324,0.674321731924103,0.578574190077352,0,0,0.621339313086926,0.56369293868419,2.24274819065968,2.48187735685646,8.94475466382619,6.71631082084202,5.74450826668646,4.69428954583016,2.3436789271911,3.67007705489988,1.93267296660805,1.72818003754719,0,1.01362607645082,0.616265742988964,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.386379188064381,0,1.46521299413812,0,0.501572104035363,12.4245405375755,5.9842280745933,10.8850147553485,10.4830441229649,11.6464028361009,14.3524840504043,13.5004500046361,16.6618845192962,10.4222754066367,23.8169743405837,0.62272408550506,1.59609949360412,2.90247129782028,2.43106717068294,2.72497111416377,4.22840069435032,2.44471400581777,2.67845574410562,4.81378814387723,2.02157769411038,2.5347929989024,2.45214243801899,3.27745276144588,2.75308155340938,2.5845961030026,2.85776214769844,3.24476112645595,2.70072908649187,1.64834360321323,1.91358596174717,3.42869252385415,3.19456451086807,1.90748951957857,2.61623549938191,1.12931256498397,2.45382362885862,3.10977553883713,3.15683653725411,2.44447404922551,2.24456908663095,3.08451047122853,3.44765688314472,2.45538625901814,3.25367366490529,2.50778594275484,2.74791635731741,3.50897412668113,2.14871054048298,2.10417165275728,0.882365676478062,0
|short_description=p1@Cpne5
}}
}}

Latest revision as of 04:55, 26 September 2015

Short description:p1@Cpne5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Cpne5_5end
Coexpression cluster:MCL_coexpression_mm9:2201
Association with transcript: -292bp_to_ENSMUST00000024805, ENSMUST00000057091_5end
EntrezGene:Cpne5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Cpne5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.57
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.58
Mouse Granule cells, donor1.CNhs12131.11713-123C38.90
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.04
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.35
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.68
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F121.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D518.33
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D69.19
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D78.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F46.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.63
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.72
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D629.17
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.77
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E116.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.29
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A412.13
corpus striatum, adult.CNhs10487.19-21D843.46
corpus striatum, neonate N00.CNhs11226.630-43F121.24
cortex, adult.CNhs10473.12-14D519.99
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F28.10
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.87
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B27.08
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.95
eyeball, embryo E14.CNhs10521.399-16E22.30
eyeball, embryo E15.CNhs10593.426-16C93.24
eyeball, embryo E17.CNhs11023.1261-18D43.01
eyeball, neonate N00.CNhs11207.633-15C62.38
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.32
forelimb, embryo E13.CNhs10589.384-1E22.99
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E72.78
forelimb, embryo E17.CNhs10598.1517-43C42.79
forelimb, embryo E18.CNhs11008.1520-43B52.06
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E99.53
heart, embryo E12.CNhs11015.353-12F53.52
heart, embryo E13.CNhs11013.376-3I95.94
heart, embryo E14.CNhs10597.403-26D47.10
heart, embryo E15.CNhs11017.431-16C84.92
heart, embryo E16.CNhs11021.457-17C63.09
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G31.61
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I22.63
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.65
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D20.67
hippocampus, adult.CNhs10478.13-16E84.21
hippocampus, neonate N00.CNhs11228.627-43G14.32
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I53.20
intestine, embryo E13.CNhs11010.381-16D52.79
intestine, embryo E15.CNhs10602.976-16D83.48
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D31.78
intestine, embryo E18.CNhs10526.1289-20F71.52
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.99
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.99
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I92.85
kidney, embryo E15.CNhs10997.434-16F81.37
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I21.43
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G23.60
lung, embryo E14.CNhs10604.404-26F82.44
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.88
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I913.50
ovary, adult.CNhs10507.91-2I70.57
ovary, embryo E18.CNhs11040.505-44H75.34
ovary, neonate N00.CNhs11217.1299-22I45.05
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E64.14
pituitary gland, embryo E13.CNhs11009.370-44C74.40
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B91.60
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F52.96
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G42.10
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C13.10
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E33.64
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D42.59
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.58
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.24
testis, embryo E15.CNhs11034.443-27C52.48
testis, embryo E16.CNhs11033.470-26G58.94
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G55.74
testis, neonate N00.CNhs11189.1300-22B74.69
testis, neonate N07.CNhs11222.726-26I42.34
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A112.42
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A310.89
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.48
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A411.65
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A514.35
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A613.50
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A716.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.42
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A923.82
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B12.72
whole body, embryo E16.CNhs10514.453-14F24.23
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.68
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.75
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.24
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.70
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.19
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.44
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.08
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.45
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.25
whole body, embryo E17.5.CNhs10513.490-9F92.51
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)9.00e-1423
neuroblast (sensu Vertebrata)9.00e-1423
neuron3.48e-0733
neuronal stem cell3.48e-0733
neuroblast3.48e-0733
electrically signaling cell3.48e-0733

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.24e-2154
neural tube3.86e-2052
neural rod3.86e-2052
future spinal cord3.86e-2052
neural keel3.86e-2052
gray matter9.07e-1934
anterior neural tube1.08e-1840
pre-chordal neural plate4.17e-1849
neurectoderm5.77e-1864
neural plate5.77e-1864
presumptive neural plate5.77e-1864
regional part of forebrain6.14e-1839
forebrain6.14e-1839
future forebrain6.14e-1839
structure with developmental contribution from neural crest9.94e-1892
brain1.69e-1647
future brain1.69e-1647
central nervous system2.60e-1673
regional part of brain8.89e-1646
nervous system2.80e-1575
ecto-epithelium8.38e-1573
brain grey matter1.24e-1429
regional part of telencephalon1.24e-1429
telencephalon1.24e-1429
ectoderm-derived structure3.01e-1295
ectoderm3.01e-1295
presumptive ectoderm3.01e-1295
cerebral cortex1.82e-0921
cerebral hemisphere1.82e-0921
pallium1.82e-0921
regional part of cerebral cortex5.00e-0917
occipital lobe1.11e-0810
visual cortex1.11e-0810
neocortex1.11e-0810
tube1.81e-07114
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