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FFCP PHASE1:Mm9::chr17:35068849..35068882,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:35068849..35068882,+
|DHSsupport=NA
|short_description=p3@Neu1
|DPIdataset=NA
|description=CAGE_peak_3_at_Neu1_5end
|association_with_transcript=41bp_to_ENSMUST00000174715_5end
|EntrezGene=18010
|EntrezGene=18010
|HGNC=
|HGNC=
|MCL_coexpression_id=291
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=41bp_to_ENSMUST00000174715_5end
|cluster_id=chr17:35068849..35068882,+
|description=CAGE_peak_3_at_Neu1_5end
|id=chr17:35068849..35068882,+
|ontology_enrichment_celltype=CL:0000791!3.24e-08!9;CL:0000789!3.24e-08!9;CL:0002420!3.24e-08!9;CL:0002419!3.24e-08!9;CL:0000790!3.24e-08!9;CL:0000624!1.88e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,2.74e-23,9;CL:0000789,2.74e-23,9;CL:0002420,2.74e-23,9;CL:0002419,2.74e-23,9;CL:0000790,2.74e-23,9;CL:0000838,5.40e-21,12;CL:0000624,8.52e-21,8;CL:0000542,3.30e-19,13;CL:0000051,3.30e-19,13;CL:0000084,1.04e-18,11;CL:0000827,1.04e-18,11;CL:0002031,1.28e-17,25;CL:0000893,8.17e-16,6;CL:0002489,8.17e-16,6;CL:0000898,8.17e-16,6;CL:0000809,8.17e-16,6;CL:0000810,8.17e-16,6;CL:0000895,8.17e-16,6;CL:0000808,8.17e-16,6;CL:0000894,8.17e-16,6;CL:0000806,8.17e-16,6;CL:0000807,8.17e-16,6;CL:0000805,8.17e-16,6;CL:0002425,8.17e-16,6;CL:0002436,8.17e-16,6;CL:0002427,8.17e-16,6;CL:0002428,8.17e-16,6;CL:0002429,8.17e-16,6;CL:0002433,8.17e-16,6;CL:0002431,8.17e-16,6;CL:0002432,8.17e-16,6;CL:0000738,3.64e-14,17;CL:0002087,3.64e-14,17;CL:0000988,4.96e-13,32;CL:0002032,4.96e-13,32;CL:0000037,4.96e-13,32;CL:0000837,4.96e-13,32;CL:0002320,4.47e-08,46;CL:0000134,4.47e-08,46
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!5.84e-11!29;UBERON:0003408!3.73e-10!24;UBERON:0002370!9.31e-10!23;UBERON:0000974!9.31e-10!23;UBERON:0004807!9.31e-10!23;UBERON:0005058!9.31e-10!23;UBERON:0003351!9.31e-10!23;UBERON:0009113!9.31e-10!23;UBERON:0003295!9.31e-10!23;UBERON:0009722!9.31e-10!23;UBERON:0005562!9.31e-10!23;UBERON:0007690!9.31e-10!23;UBERON:0002193!1.01e-09!48;UBERON:0000064!3.54e-09!99;UBERON:0006562!6.29e-09!24;UBERON:0001557!6.29e-09!24;UBERON:0001042!6.29e-09!24;UBERON:0008814!6.29e-09!24;UBERON:0009145!6.29e-09!24;UBERON:0002390!1.69e-08!45;UBERON:0003061!1.69e-08!45;UBERON:0000072!1.62e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,9.86e-32,23;UBERON:0000974,9.86e-32,23;UBERON:0004807,9.86e-32,23;UBERON:0005058,9.86e-32,23;UBERON:0003351,9.86e-32,23;UBERON:0009113,9.86e-32,23;UBERON:0003295,9.86e-32,23;UBERON:0009722,9.86e-32,23;UBERON:0005562,9.86e-32,23;UBERON:0007690,9.86e-32,23;UBERON:0006562,3.16e-30,24;UBERON:0003408,3.16e-30,24;UBERON:0001557,3.16e-30,24;UBERON:0001042,3.16e-30,24;UBERON:0008814,3.16e-30,24;UBERON:0009145,3.16e-30,24;UBERON:0004177,4.52e-30,29;UBERON:0005057,4.52e-30,29;UBERON:0002193,6.26e-29,48;UBERON:0002405,6.26e-29,48;UBERON:0002390,1.51e-26,45;UBERON:0003061,1.51e-26,45;UBERON:0000072,2.24e-26,27;UBERON:0000077,4.41e-24,35;UBERON:0007811,1.10e-18,36;UBERON:0000065,7.11e-16,41;UBERON:0001004,2.15e-15,42;UBERON:0000153,6.19e-15,43;UBERON:0003081,3.76e-12,87;UBERON:0003929,4.25e-12,55;UBERON:0002530,1.47e-09,65;UBERON:0002368,1.69e-09,60;UBERON:0000490,2.42e-09,66;UBERON:0005911,9.54e-09,69;UBERON:0000949,3.65e-08,72;UBERON:0002384,4.47e-08,46;UBERON:0001041,6.97e-08,80;UBERON:0000926,3.03e-07,120;UBERON:0004120,3.03e-07,120;UBERON:0006603,3.03e-07,120
|phase1_expression=0.320297694209588,0,0,0,1.50268718983904,0.16787927191189,0,13.8161956082487,2.956563165185,2.80877431586392,6.8487187290202,7.8974437405383,13.5248576645653,13.5501623749446,0.666219523631325,2.02475267389826,0,3.78554598429885,2.05671650408608,1.69755860719212,0.255129870453209,0,0,1.11994695955385,0.45881856213434,0.57423196411502,0,0,1.33016393619462,0.756090389279792,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.58328969722285,0,0,3.6912173332702,7.25362142011344,10.4189077734164,0,0,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.548925861614458,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.427115042397309,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0.254140454146129,0.449371918214468,0.915001205637253,0.628271760564322,0.695297280769106,1.53429274398198,0,0.486723789203273,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0.431135985865684,0,0.351902248327898,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,1.68231958851302,0.205809224758569,0,0,0.213288250535234,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.432276099749388,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.470996183524124,0.740382983530803,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0.565815239267694,0.885905678642318,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0,0,0,0,0.370850604021019,0.854354403989263,0,0.185194527369712,0.941842285023455,1.0935538217682,2.0590035588587,0.339956859987711,0.69975726161829,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0,3.16011120628178,0,0.513554785824136,1.29920822977795,1.25318686967237,1.98681354781265,2.76449533895928,2.36303243479324,3.12995994839258,2.057583779685,2.11734988787365,3.50848370663109,3.46362629905186,5.2594605981706,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.915758121336325,0,1.50471631210609,0.564751842617067,1.38097570952153,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,1.80128481289688,0.453142408984205,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0,0,0.818462086339379,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0
|phase1_expression=0.320297694209588,0,0,0,1.50268718983904,0.16787927191189,0,13.8161956082487,2.956563165185,2.80877431586392,6.8487187290202,7.8974437405383,13.5248576645653,13.5501623749446,0.666219523631325,2.02475267389826,0,3.78554598429885,2.05671650408608,1.69755860719212,0.255129870453209,0,0,1.11994695955385,0.45881856213434,0.57423196411502,0,0,1.33016393619462,0.756090389279792,0.886922042621219,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0.58328969722285,0,0,3.6912173332702,7.25362142011344,10.4189077734164,0,0,0.515672092277442,0.809265843438391,0.528990979272033,0.633831403506179,0,0,0,0,0.7104801149461,0,0,0.103689612308478,0,0,0.571301968807607,0.220868540951614,0.244981598429908,0.0958454710182364,0,0,0.255374676170375,0.307213066512487,0.263772575460388,0.548925861614458,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0.427115042397309,0.372798891650601,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.22836775943812,1.03575153458869,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0.766371165625774,0.11981512450592,0,0.254140454146129,0.449371918214468,0.915001205637253,0.628271760564322,0.695297280769106,1.53429274398198,0,0.486723789203273,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0.431135985865684,0,0.351902248327898,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,1.68231958851302,0.205809224758569,0,0,0.213288250535234,0,0,0.201683524623343,0.667134131534611,0.380451252225118,0.474529061544512,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.432276099749388,0,0.379335801906163,0.114248512609729,0,0,0,0.0701358198903186,0.189709611372772,0,0.470996183524124,0.740382983530803,0,0.166845105716094,0,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0.372140947668503,0.312037673114561,0,0,0.482443521363367,0.739012760666419,0,0.162964976442026,0,0.234690248288502,0,0,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0,0.315508219416257,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0.989820737835213,0,0.242780636154981,0.302323556964751,0.565815239267694,0.885905678642318,0,0.258428293168221,0,0,0.316036757935816,1.05418608574999,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0.161464426695906,0,0,0,0,0.370850604021019,0.854354403989263,0,0.185194527369712,0.941842285023455,1.0935538217682,2.0590035588587,0.339956859987711,0.69975726161829,0.138199973804424,0,0.158167996790568,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0,0,0,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,0,3.16011120628178,0,0.513554785824136,1.29920822977795,1.25318686967237,1.98681354781265,2.76449533895928,2.36303243479324,3.12995994839258,2.057583779685,2.11734988787365,3.50848370663109,3.46362629905186,5.2594605981706,0,0,0.0897138566094757,0,0.19318959403219,0.187682475451182,0.915758121336325,0,1.50471631210609,0.564751842617067,1.38097570952153,0.572895513439397,0.171853182343688,0,0.755393897389701,0.675022500231806,1.80128481289688,0.453142408984205,0.51776031175182,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.280924522409647,0,0.114870937911227,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.685738504770831,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0,0,0.818462086339379,0.309873682371932,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0
|short_description=p3@Neu1
}}
}}

Latest revision as of 08:59, 26 September 2015

Short description:p3@Neu1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Neu1_5end
Coexpression cluster:MCL_coexpression_mm9:291
Association with transcript: 41bp_to_ENSMUST00000174715_5end
EntrezGene:Neu1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Neu1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.82
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.96
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.81
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E66.85
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F17.90
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E413.52
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.55
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A42.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.12
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B91.33
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.69
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.42
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.31
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.37
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F10.63
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F21.53
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.00
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.68
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.74
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.99
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.94
spleen, neonate N20.CNhs11112.824-19H11.09
spleen, neonate N25.CNhs11099.1354-25G32.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B53.16
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C51.30
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G41.99
thymus, neonate N02.CNhs11181.1541-43F82.76
thymus, neonate N03.CNhs11137.2104-43C72.36
thymus, neonate N06.CNhs11197.681-26C43.13
thymus, neonate N07.CNhs11211.713-19D32.06
thymus, neonate N10.CNhs11194.748-24E42.12
thymus, neonate N20.CNhs11186.820-7A23.51
thymus, neonate N25.CNhs11125.1362-25G73.46
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell2.74e-239
alpha-beta T cell2.74e-239
immature T cell2.74e-239
mature T cell2.74e-239
immature alpha-beta T cell2.74e-239
lymphoid lineage restricted progenitor cell5.40e-2112
CD4-positive, alpha-beta T cell8.52e-218
lymphocyte3.30e-1913
common lymphoid progenitor3.30e-1913
T cell1.04e-1811
pro-T cell1.04e-1811
hematopoietic lineage restricted progenitor cell1.28e-1725
thymocyte8.17e-166
double negative thymocyte8.17e-166
naive T cell8.17e-166
double-positive, alpha-beta thymocyte8.17e-166
CD4-positive, alpha-beta thymocyte8.17e-166
naive thymus-derived CD4-positive, alpha-beta T cell8.17e-166
DN4 thymocyte8.17e-166
DN1 thymic pro-T cell8.17e-166
DN2 thymocyte8.17e-166
DN3 thymocyte8.17e-166
immature single positive thymocyte8.17e-166
early T lineage precursor8.17e-166
mature CD4 single-positive thymocyte8.17e-166
resting double-positive thymocyte8.17e-166
double-positive blast8.17e-166
CD69-positive double-positive thymocyte8.17e-166
CD69-positive, CD4-positive single-positive thymocyte8.17e-166
CD4-positive, CD8-intermediate double-positive thymocyte8.17e-166
CD24-positive, CD4 single-positive thymocyte8.17e-166
leukocyte3.64e-1417
nongranular leukocyte3.64e-1417
hematopoietic cell4.96e-1332
hematopoietic oligopotent progenitor cell4.96e-1332
hematopoietic stem cell4.96e-1332
hematopoietic multipotent progenitor cell4.96e-1332
connective tissue cell4.47e-0846
mesenchymal cell4.47e-0846

Uber anatomy
Ontology termp-valuen
thymus9.86e-3223
neck9.86e-3223
respiratory system epithelium9.86e-3223
hemolymphoid system gland9.86e-3223
pharyngeal epithelium9.86e-3223
thymic region9.86e-3223
pharyngeal gland9.86e-3223
entire pharyngeal arch endoderm9.86e-3223
thymus primordium9.86e-3223
early pharyngeal endoderm9.86e-3223
pharynx3.16e-3024
gland of gut3.16e-3024
upper respiratory tract3.16e-3024
chordate pharynx3.16e-3024
pharyngeal arch system3.16e-3024
pharyngeal region of foregut3.16e-3024
hemopoietic organ4.52e-3029
immune organ4.52e-3029
hemolymphoid system6.26e-2948
immune system6.26e-2948
hematopoietic system1.51e-2645
blood island1.51e-2645
segment of respiratory tract2.24e-2627
mixed endoderm/mesoderm-derived structure4.41e-2435
craniocervical region1.10e-1836
respiratory tract7.11e-1641
respiratory system2.15e-1542
anterior region of body6.19e-1543
lateral plate mesoderm3.76e-1287
gut epithelium4.25e-1255
gland1.47e-0965
endocrine gland1.69e-0960
unilaminar epithelium2.42e-0966
endo-epithelium9.54e-0969
endocrine system3.65e-0872
connective tissue4.47e-0846
foregut6.97e-0880
mesoderm3.03e-07120
mesoderm-derived structure3.03e-07120
presumptive mesoderm3.03e-07120
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