FFCP PHASE1:Mm9::chr5:115939562..115939592,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr5:115939562..115939592,- to FFCP PHASE1:Mm9::chr5:115939562..115939592,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:115939562..115939592,- | |||
|description=CAGE_peak_at_chr5:115939562..115939592,- | |||
|id=chr5:115939562..115939592,- | |||
|ontology_enrichment_celltype=CL:0000723!4.41e-30!91;CL:0000048!4.41e-30!91;CL:0002371!9.46e-28!118;CL:0000144!4.80e-27!121;CL:0000012!4.80e-27!121;CL:0000034!5.16e-27!97;CL:0000548!1.18e-26!115;CL:0000004!1.18e-26!115;CL:0000255!1.18e-26!115;CL:0002321!7.66e-20!70;CL:0000220!7.66e-20!70;CL:0002319!1.40e-18!43;CL:0000055!3.20e-18!50;CL:0000540!7.26e-18!33;CL:0000047!7.26e-18!33;CL:0000031!7.26e-18!33;CL:0000404!7.26e-18!33;CL:0000221!1.43e-17!44;CL:0000133!1.43e-17!44;CL:0000393!7.25e-17!39;CL:0000211!7.25e-17!39;CL:0000117!5.94e-14!23;CL:0000337!5.94e-14!23;CL:0000219!1.03e-10!54;CL:0002320!2.91e-10!46;CL:0000134!2.91e-10!46;CL:0000063!3.04e-10!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,4.18e-35,91;CL:0000048,4.18e-35,91;CL:0000034,7.63e-32,97;CL:0002321,4.14e-30,70;CL:0002319,1.28e-26,43;CL:0000540,3.14e-26,33;CL:0000047,3.14e-26,33;CL:0000031,3.14e-26,33;CL:0000404,3.14e-26,33;CL:0000393,8.66e-26,39;CL:0000211,8.66e-26,39;CL:0000221,9.33e-26,44;CL:0000133,9.33e-26,44;CL:0000117,2.38e-21,23;CL:0000337,2.38e-21,23;CL:0000219,9.58e-10,54;CL:0002320,1.96e-09,46;CL:0000134,1.96e-09,46;CL:0000839,1.18e-07,13;CL:0000107,4.43e-07,9;CL:0000763,7.84e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.90e-13!73;UBERON:0005743!1.90e-13!73;UBERON:0000073!1.44e-12!75;UBERON:0001016!1.44e-12!75;UBERON:0002384!2.91e-10!46;UBERON:0002020!3.10e-09!34;UBERON:0002791!8.59e-07!29;UBERON:0003528!8.59e-07!29;UBERON:0001893!8.59e-07!29;UBERON:0001049!8.91e-07!52;UBERON:0005068!8.91e-07!52;UBERON:0006241!8.91e-07!52;UBERON:0007135!8.91e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.31e-17,73;UBERON:0001016,2.02e-16,75;UBERON:0002020,3.10e-13,34;UBERON:0004121,3.62e-11,95;UBERON:0000924,3.62e-11,95;UBERON:0006601,3.62e-11,95;UBERON:0002384,1.96e-09,46;UBERON:0003528,5.18e-09,29;UBERON:0002791,5.18e-09,29;UBERON:0001893,5.18e-09,29;UBERON:0000073,5.27e-09,54;UBERON:0002371,2.10e-08,16;UBERON:0001049,2.81e-07,52;UBERON:0005068,2.81e-07,52;UBERON:0006241,2.81e-07,52;UBERON:0007135,2.81e-07,52;UBERON:0002410,4.43e-07,9 | |||
|phase1_expression=0.320297694209588,0,1.36499771816861,0,2.50447864973174,0.33575854382378,0.467225281191051,1.03298658753261,1.83025338797167,0.936258105287974,0.68487187290202,0.0797721589953364,2.05440875917447,0.961624426608971,2.99798785634096,0,1.39912375625629,1.26184866143295,1.23402990245165,7.21462408056651,0.17008658030214,0.397163804803541,1.30599894569468,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,1.10865255327652,13.3356441426523,0.61506478758457,15.8481681015439,1.73310971850765,0.831173226792462,1.42918549383658,1.25559489221072,0.7813353445238,0.523523743973798,2.94115744015507,3.41522742479223,3.39857247121808,0,0.304130793658544,0,4.69434806608824,0.436050312760893,5.71184075109627,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,1.02903774414379,2.57880095944881,4.64104883049698,8.09265843438391,4.7609188134483,7.60597684207415,5.76035704517525,2.66788438833342,12.1486461832989,6.92206453796882,8.5257613793532,4.49400165777607,5.76327457982332,4.45865332926454,10.5304631898719,8.62332341540666,5.42736870367227,6.40518768759679,11.5141351262057,0.862609239164127,5.51531271966013,1.10115880999389,1.65993539510744,1.53606533256243,6.85808696197008,0.823388792421687,8.33461392890816,7.2587579740359,9.56696437053856,3.97275444219706,1.47314292736834,3.41692033917847,7.64237727883732,0.075726193333184,0,0.869593466105033,0.860423876981386,2.03991400112325,1.61910957491345,1.29955283489534,2.24013443548668,0.140444420131752,0.170430322578058,0.519572009205738,0.70667914902068,0,1.28326477414318,0,0,2.38140145112336,1.52015919285059,2.02209778005913,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0.510914110417183,0.718890747035522,2.99951365496704,0.254140454146129,0.149790639404823,0,0,0.173824320192276,0,0,0,0.305518091550949,0,0.252722758433675,0,0,0.919608417733892,0,0.30140963567143,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0,0.351902248327898,0,0,0.348252166522167,0,0.59710280045548,0.702213187313235,0.257347907114715,1.13665399758237,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,1.07309360559848,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0,0,0.210289948564127,0,0.660837565967596,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0.50925170356284,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0.488894929326078,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.433947175744535,1.50791283939272,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,1.89304931649754,2.73307121007647,2.80050417052639,0.955875191810208,1.11399337041197,3.11384183867716,2.42886421004937,2.33804686329049,4.74345333535828,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.646793418913773,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.63549621259146,0.220528398054962,0,0,0,0.119372344003136,0,0,0.18542530201051,0.512612642393558,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,1.24267862617385,0.56369293868419,0.448549638131936,0.165458490457098,0,0.387479470433193,0.506868376472335,0,0.2604087696879,0.104859344425711,0,0,0,0,0.205421914329655,0.389762468933385,0,0,0.360586348559907,0,0,0.228620419965,0.100826185136841,0.194915761479505,0.577271049841977,0.233753804363138,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,1.38097570952153,0,1.20297227640581,4.11049511862385,3.7769694869485,2.02506750069542,1.80128481289688,0.906284817968409,0,0.31136204275253,0,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0,0.468207537349412,0.192075457214608,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0.467863216890817,0,0.382576664137687,0.661774257358546,0.463735671240843 | |phase1_expression=0.320297694209588,0,1.36499771816861,0,2.50447864973174,0.33575854382378,0.467225281191051,1.03298658753261,1.83025338797167,0.936258105287974,0.68487187290202,0.0797721589953364,2.05440875917447,0.961624426608971,2.99798785634096,0,1.39912375625629,1.26184866143295,1.23402990245165,7.21462408056651,0.17008658030214,0.397163804803541,1.30599894569468,0.319984845586813,0.45881856213434,0,0.430761996159075,0.215471232685889,0.950117097281869,0.756090389279792,1.10865255327652,13.3356441426523,0.61506478758457,15.8481681015439,1.73310971850765,0.831173226792462,1.42918549383658,1.25559489221072,0.7813353445238,0.523523743973798,2.94115744015507,3.41522742479223,3.39857247121808,0,0.304130793658544,0,4.69434806608824,0.436050312760893,5.71184075109627,0.58328969722285,0.139986421625363,1.43752564364972,0,0,0,1.02903774414379,2.57880095944881,4.64104883049698,8.09265843438391,4.7609188134483,7.60597684207415,5.76035704517525,2.66788438833342,12.1486461832989,6.92206453796882,8.5257613793532,4.49400165777607,5.76327457982332,4.45865332926454,10.5304631898719,8.62332341540666,5.42736870367227,6.40518768759679,11.5141351262057,0.862609239164127,5.51531271966013,1.10115880999389,1.65993539510744,1.53606533256243,6.85808696197008,0.823388792421687,8.33461392890816,7.2587579740359,9.56696437053856,3.97275444219706,1.47314292736834,3.41692033917847,7.64237727883732,0.075726193333184,0,0.869593466105033,0.860423876981386,2.03991400112325,1.61910957491345,1.29955283489534,2.24013443548668,0.140444420131752,0.170430322578058,0.519572009205738,0.70667914902068,0,1.28326477414318,0,0,2.38140145112336,1.52015919285059,2.02209778005913,0.11418387971906,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0,0.41889341362691,0.510914110417183,0.718890747035522,2.99951365496704,0.254140454146129,0.149790639404823,0,0,0.173824320192276,0,0,0,0.305518091550949,0,0.252722758433675,0,0,0.919608417733892,0,0.30140963567143,0.136072998302656,0.12811372028485,0.374806898238915,0,0,0,0.351902248327898,0,0,0.348252166522167,0,0.59710280045548,0.702213187313235,0.257347907114715,1.13665399758237,0,0,0.180062061461015,0.23674473558521,0.196764231747404,0,0,1.07309360559848,0.116765342367169,0,0,0.0810688095458557,0.438599962275997,0,0,0.210289948564127,0,0.660837565967596,0,0.426576501070468,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0.432276099749388,0.398282546508734,0,0,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0,0,0.123397163921801,0.296452627087149,0,0.196558995113203,0.224862112384854,0,0,0.50925170356284,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.369506380333209,0.37898282354097,0.488894929326078,0,0.234690248288502,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0.433947175744535,1.50791283939272,0,0.491764273019036,0.275936746304732,0,0.117211686592203,0,0,1.89304931649754,2.73307121007647,2.80050417052639,0.955875191810208,1.11399337041197,3.11384183867716,2.42886421004937,2.33804686329049,4.74345333535828,0,0,0.178065603667255,0.488660878060728,0,0,0.242780636154981,0.302323556964751,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.18006109403131,0.646793418913773,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0.608929898229199,0,0.63549621259146,0.220528398054962,0,0,0,0.119372344003136,0,0,0.18542530201051,0.512612642393558,0,0.185194527369712,0,0,0,0.169978429993855,0.139951452323658,0.138199973804424,0,0.158167996790568,0.203319467126849,0.108005340821801,0.418176592028937,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,1.24267862617385,0.56369293868419,0.448549638131936,0.165458490457098,0,0.387479470433193,0.506868376472335,0,0.2604087696879,0.104859344425711,0,0,0,0,0.205421914329655,0.389762468933385,0,0,0.360586348559907,0,0,0.228620419965,0.100826185136841,0.194915761479505,0.577271049841977,0.233753804363138,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.428736758158132,0.501572104035363,0.564751842617067,1.38097570952153,0,1.20297227640581,4.11049511862385,3.7769694869485,2.02506750069542,1.80128481289688,0.906284817968409,0,0.31136204275253,0,0,0.243106717068294,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0,0.468207537349412,0.192075457214608,0.114870937911227,0.476293691283074,0,0.192909220463705,0,0,0,0.177475806159338,0,0.145346416632329,0,0.0846146078916765,0,0,0.135804113845862,0,0.237270036248348,0.0985044823755635,0,0,0.385813221962283,0,0.467863216890817,0,0.382576664137687,0.661774257358546,0.463735671240843 | ||
|short_description=p@chr5:115939562..115939592,- | |||
}} | }} |
Latest revision as of 03:03, 6 August 2015
Short description: | p@chr5:115939562..115939592, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:115939562..115939592, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 4.18e-35 | 91 |
multi fate stem cell | 4.18e-35 | 91 |
stem cell | 7.63e-32 | 97 |
embryonic cell | 4.14e-30 | 70 |
neural cell | 1.28e-26 | 43 |
neuron | 3.14e-26 | 33 |
neuronal stem cell | 3.14e-26 | 33 |
neuroblast | 3.14e-26 | 33 |
electrically signaling cell | 3.14e-26 | 33 |
electrically responsive cell | 8.66e-26 | 39 |
electrically active cell | 8.66e-26 | 39 |
ectodermal cell | 9.33e-26 | 44 |
neurectodermal cell | 9.33e-26 | 44 |
CNS neuron (sensu Vertebrata) | 2.38e-21 | 23 |
neuroblast (sensu Vertebrata) | 2.38e-21 | 23 |
motile cell | 9.58e-10 | 54 |
connective tissue cell | 1.96e-09 | 46 |
mesenchymal cell | 1.96e-09 | 46 |
myeloid lineage restricted progenitor cell | 1.18e-07 | 13 |
autonomic neuron | 4.43e-07 | 9 |
myeloid cell | 7.84e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.31e-17 | 73 |
nervous system | 2.02e-16 | 75 |
gray matter | 3.10e-13 | 34 |
ectoderm-derived structure | 3.62e-11 | 95 |
ectoderm | 3.62e-11 | 95 |
presumptive ectoderm | 3.62e-11 | 95 |
connective tissue | 1.96e-09 | 46 |
brain grey matter | 5.18e-09 | 29 |
regional part of telencephalon | 5.18e-09 | 29 |
telencephalon | 5.18e-09 | 29 |
regional part of nervous system | 5.27e-09 | 54 |
bone marrow | 2.10e-08 | 16 |
neural tube | 2.81e-07 | 52 |
neural rod | 2.81e-07 | 52 |
future spinal cord | 2.81e-07 | 52 |
neural keel | 2.81e-07 | 52 |
autonomic nervous system | 4.43e-07 | 9 |