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{{f5samples
{{f5samples
|id=FF:10765-110E9
|DRA_sample_Accession=CAGE@SAMD00005633
|name=acute myeloid leukemia (FAB M2) cell line:NKM-1
|accession_numbers=CAGE;DRX007805;DRR008677;DRZ000102;DRZ001487;DRZ011452;DRZ012837
|sample_id=10765
|ancestors_in_anatomy_facet=
|rna_tube_id=110E9
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0000763,CL:0002371,CL:0000255
|rna_box=110
|ancestors_in_disease_facet=DOID:4,DOID:0050686,DOID:162,DOID:2531,DOID:14566,DOID:0060083,DOID:1240,DOID:8692
|rna_position=E9
|ancestors_in_ff_facet=FF:0000102,FF:0000003,FF:0000210,FF:0000101,FF:0000001,FF:0100737,FF:0101035,FF:0101883,FF:0100740
|sample_cell_lot=
|comment=
|sample_cell_catalog=ifo50476
|created_by=
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|creation_date=
|rna_lot_number=
|data_phase=2
|rna_catalog_number=
|datafreeze_phase=2
|sample_species=Human (Homo sapiens)
|def=
|sample_strain=
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|sample_dev_stage=
|ffid_belonging_in_development=CL:0000049,CL:0000134
|sample_tissue=blood
|sample_donor(cell lot)=
|sample_sex=male
|sample_age=33
|sample_ethnicity=J
|rna_rin=
|rna_od260/230=2.06
|rna_od260/280=2.17
|sample_cell_type=myeloid progenitor cell
|sample_cell_line=NKM-1  
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_experimental_condition=
|sample_disease=acute myeloid leukemia (FAB M2)
|rna_sample_type=total RNA
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_weight_ug=27.25065
|rna_concentration=0.60557
|sample_note=
|profile_hcage=CNhs11864,LSID830,release010,COMPLETED
|profile_cagescan=,,,
|profile_srnaseq=,,,
|profile_rnaseq=,,,
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000049,CL:0000063,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000548,CL:0000566,CL:0000723,CL:0000763,CL:0000837,CL:0000988,CL:0002032,CL:0002320,CL:0002371
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|ancestors_in_disease_facet=DOID:0050686,DOID:0060083,DOID:1240,DOID:14566,DOID:162,DOID:2531,DOID:4,DOID:8692
|sample_description=
|fonse_cell_line=FF:0101035
|fonse_cell_line=FF:0101035
|fonse_cell_line_closure=FF:0101035
|fonse_cell_line_closure=FF:0101035
Line 66: Line 40:
|fonse_treatment=
|fonse_treatment=
|fonse_treatment_closure=
|fonse_treatment_closure=
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|rna_box=110
|rna_catalog_number=
|rna_concentration=0.60557
|rna_extraction_protocol=OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0
|rna_lot_number=
|rna_od260/230=2.06
|rna_od260/280=2.17
|rna_position=E9
|rna_rin=
|rna_sample_type=total RNA
|rna_tube_id=1.10E+11
|rna_weight_ug=27.25065
|sample_age=33
|sample_category=cell lines
|sample_cell_catalog=ifo50476
|sample_cell_line=NKM-1
|sample_cell_lot=
|sample_cell_type=myeloid progenitor cell
|sample_collaboration=FANTOM5 OSC CORE (contact: Al Forrest)
|sample_company=JAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
|sample_description=
|sample_dev_stage=
|sample_disease=acute myeloid leukemia (FAB M2)
|sample_donor(cell lot)=
|sample_ethnicity=J
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.18909354114845e-254!GO:0043227;membrane-bound organelle;1.55647246414413e-219!GO:0043231;intracellular membrane-bound organelle;2.84357770833016e-219!GO:0043226;organelle;5.55024273845313e-210!GO:0043229;intracellular organelle;1.38011125308337e-209!GO:0005737;cytoplasm;2.40168495799064e-160!GO:0044422;organelle part;7.18358528493689e-153!GO:0044446;intracellular organelle part;2.49350589536296e-151!GO:0044444;cytoplasmic part;1.99258522684115e-117!GO:0044237;cellular metabolic process;1.48952526137117e-116!GO:0032991;macromolecular complex;4.8756687658073e-115!GO:0044238;primary metabolic process;2.1719793769277e-112!GO:0005634;nucleus;6.61692510393867e-107!GO:0043170;macromolecule metabolic process;7.33777579414341e-104!GO:0030529;ribonucleoprotein complex;6.12374104891105e-97!GO:0044428;nuclear part;2.34257610169101e-93!GO:0003723;RNA binding;7.49789378097571e-87!GO:0043233;organelle lumen;1.58570480587514e-84!GO:0031974;membrane-enclosed lumen;1.58570480587514e-84!GO:0005739;mitochondrion;9.09029325678333e-80!GO:0043283;biopolymer metabolic process;4.81906421683572e-66!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.90142805237346e-61!GO:0006396;RNA processing;2.98365282098434e-61!GO:0006412;translation;1.37350556433102e-59!GO:0043234;protein complex;8.02611121973203e-58!GO:0005515;protein binding;2.30352533289976e-56!GO:0010467;gene expression;8.59691848453425e-56!GO:0005840;ribosome;9.99300858573827e-55!GO:0031981;nuclear lumen;6.9790021692804e-54!GO:0044429;mitochondrial part;1.28111895131643e-53!GO:0006259;DNA metabolic process;4.24693767546537e-51!GO:0019538;protein metabolic process;4.58547448002803e-51!GO:0016071;mRNA metabolic process;2.24255447895676e-48!GO:0031967;organelle envelope;5.79266031915712e-48!GO:0031975;envelope;1.39349681509674e-47!GO:0044267;cellular protein metabolic process;2.02163660002227e-47!GO:0003735;structural constituent of ribosome;2.84906769259389e-47!GO:0044260;cellular macromolecule metabolic process;3.67742027072193e-47!GO:0044249;cellular biosynthetic process;4.31207896165564e-46!GO:0009058;biosynthetic process;4.29009632640969e-45!GO:0009059;macromolecule biosynthetic process;3.71788071628421e-44!GO:0031090;organelle membrane;8.91242441041735e-44!GO:0016043;cellular component organization and biogenesis;5.6957870663876e-42!GO:0008380;RNA splicing;2.16442618539431e-41!GO:0033036;macromolecule localization;3.33280170713338e-41!GO:0006397;mRNA processing;4.7135129727897e-41!GO:0033279;ribosomal subunit;5.51883531397121e-40!GO:0015031;protein transport;7.59917370181424e-40!GO:0003676;nucleic acid binding;2.09172335630351e-39!GO:0045184;establishment of protein localization;2.57224925481874e-37!GO:0006996;organelle organization and biogenesis;3.06892902328646e-37!GO:0022613;ribonucleoprotein complex biogenesis and assembly;8.80062433549786e-37!GO:0008104;protein localization;9.71430577541167e-37!GO:0005829;cytosol;2.08331493978698e-36!GO:0046907;intracellular transport;6.04910158767272e-35!GO:0005654;nucleoplasm;1.87045895021658e-34!GO:0065003;macromolecular complex assembly;2.02081824508469e-34!GO:0043228;non-membrane-bound organelle;5.02541916454058e-34!GO:0043232;intracellular non-membrane-bound organelle;5.02541916454058e-34!GO:0005740;mitochondrial envelope;7.42244080571033e-33!GO:0019866;organelle inner membrane;2.88242596992486e-32!GO:0000166;nucleotide binding;3.43977271682528e-32!GO:0007049;cell cycle;9.42598855751346e-32!GO:0031966;mitochondrial membrane;1.24895566214103e-31!GO:0006886;intracellular protein transport;2.95042975872074e-31!GO:0005681;spliceosome;1.88699981210415e-30!GO:0022607;cellular component assembly;3.81754824593898e-30!GO:0005743;mitochondrial inner membrane;1.24814449384832e-29!GO:0005694;chromosome;1.70238838815275e-29!GO:0006974;response to DNA damage stimulus;1.98043420179559e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.19792425905186e-28!GO:0051649;establishment of cellular localization;4.43186420722445e-27!GO:0016070;RNA metabolic process;1.3473532928798e-26!GO:0051641;cellular localization;1.63637186355636e-26!GO:0044445;cytosolic part;1.00755450147037e-25!GO:0044451;nucleoplasm part;1.04424317947436e-25!GO:0022402;cell cycle process;1.53844386989094e-25!GO:0031980;mitochondrial lumen;2.42219063271883e-25!GO:0005759;mitochondrial matrix;2.42219063271883e-25!GO:0006281;DNA repair;7.63777985233352e-25!GO:0044427;chromosomal part;1.04737703762419e-24!GO:0006119;oxidative phosphorylation;2.95432248020851e-24!GO:0000278;mitotic cell cycle;4.56081482481699e-24!GO:0051276;chromosome organization and biogenesis;6.01680109404402e-24!GO:0016874;ligase activity;2.83777193170554e-23!GO:0005524;ATP binding;5.37085121646738e-23!GO:0044455;mitochondrial membrane part;7.36986627170726e-23!GO:0032553;ribonucleotide binding;1.43779203840488e-22!GO:0032555;purine ribonucleotide binding;1.43779203840488e-22!GO:0032559;adenyl ribonucleotide binding;1.51169079568766e-22!GO:0017076;purine nucleotide binding;3.10611232069946e-22!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;4.17508556102243e-22!GO:0016817;hydrolase activity, acting on acid anhydrides;4.34120916037208e-22!GO:0016462;pyrophosphatase activity;4.52893654851889e-22!GO:0030554;adenyl nucleotide binding;6.00590590049881e-22!GO:0017111;nucleoside-triphosphatase activity;1.89844933749394e-21!GO:0015934;large ribosomal subunit;6.30895275614103e-21!GO:0044265;cellular macromolecule catabolic process;7.29585375150152e-21!GO:0006512;ubiquitin cycle;8.74028734864488e-21!GO:0022618;protein-RNA complex assembly;3.02768452958334e-20!GO:0015935;small ribosomal subunit;3.1419294886243e-20!GO:0005730;nucleolus;3.38483487728738e-20!GO:0006325;establishment and/or maintenance of chromatin architecture;9.48795492637715e-20!GO:0009719;response to endogenous stimulus;1.9412464934677e-19!GO:0022403;cell cycle phase;2.73103401790874e-19!GO:0006323;DNA packaging;5.35982737624861e-19!GO:0006260;DNA replication;6.15235151641688e-19!GO:0042623;ATPase activity, coupled;7.37031219418186e-19!GO:0043285;biopolymer catabolic process;7.37031219418186e-19!GO:0005746;mitochondrial respiratory chain;7.74998817280479e-19!GO:0016887;ATPase activity;1.29471725925715e-18!GO:0000087;M phase of mitotic cell cycle;3.54287009938875e-18!GO:0009057;macromolecule catabolic process;6.47946507371371e-18!GO:0007067;mitosis;8.39821402899498e-18!GO:0044248;cellular catabolic process;9.76593553598156e-18!GO:0043412;biopolymer modification;1.51778222840695e-17!GO:0006605;protein targeting;1.70115656256603e-17!GO:0042254;ribosome biogenesis and assembly;2.6291625179153e-17!GO:0051186;cofactor metabolic process;6.38755730127297e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;2.90249657220466e-16!GO:0019941;modification-dependent protein catabolic process;3.09266708036996e-16!GO:0043632;modification-dependent macromolecule catabolic process;3.09266708036996e-16!GO:0050136;NADH dehydrogenase (quinone) activity;3.14339990925336e-16!GO:0003954;NADH dehydrogenase activity;3.14339990925336e-16!GO:0008137;NADH dehydrogenase (ubiquinone) activity;3.14339990925336e-16!GO:0006511;ubiquitin-dependent protein catabolic process;3.68225891078526e-16!GO:0051301;cell division;3.71827956725663e-16!GO:0006457;protein folding;3.72443803042381e-16!GO:0000502;proteasome complex (sensu Eukaryota);3.99822884289264e-16!GO:0031965;nuclear membrane;4.9184166163923e-16!GO:0044257;cellular protein catabolic process;5.65582412503474e-16!GO:0005635;nuclear envelope;8.28774079454301e-16!GO:0008135;translation factor activity, nucleic acid binding;1.02456165099566e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.03145774262944e-15!GO:0000279;M phase;1.41275249216781e-15!GO:0005761;mitochondrial ribosome;1.55350708013377e-15!GO:0000313;organellar ribosome;1.55350708013377e-15!GO:0048770;pigment granule;2.82608074308373e-15!GO:0042470;melanosome;2.82608074308373e-15!GO:0016604;nuclear body;2.96740333502518e-15!GO:0044453;nuclear membrane part;3.07572165373634e-15!GO:0008134;transcription factor binding;3.14497795758143e-15!GO:0012505;endomembrane system;3.98743481783904e-15!GO:0000398;nuclear mRNA splicing, via spliceosome;4.07840382492722e-15!GO:0000375;RNA splicing, via transesterification reactions;4.07840382492722e-15!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;4.07840382492722e-15!GO:0006913;nucleocytoplasmic transport;4.80054709884301e-15!GO:0004386;helicase activity;4.9127623706781e-15!GO:0042775;organelle ATP synthesis coupled electron transport;1.10155541098401e-14!GO:0042773;ATP synthesis coupled electron transport;1.10155541098401e-14!GO:0000785;chromatin;1.15129118953998e-14!GO:0051169;nuclear transport;1.15724858648034e-14!GO:0006464;protein modification process;1.2364630319932e-14!GO:0016568;chromatin modification;1.99063696658912e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.11449725563648e-14!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);2.23354710337201e-14!GO:0030964;NADH dehydrogenase complex (quinone);2.96231767651964e-14!GO:0045271;respiratory chain complex I;2.96231767651964e-14!GO:0005747;mitochondrial respiratory chain complex I;2.96231767651964e-14!GO:0006732;coenzyme metabolic process;5.01949459321003e-14!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.00618823636068e-13!GO:0051726;regulation of cell cycle;1.20185837360227e-13!GO:0030163;protein catabolic process;2.08972249131518e-13!GO:0000074;regulation of progression through cell cycle;2.14435746625063e-13!GO:0006399;tRNA metabolic process;2.47559700855046e-13!GO:0043687;post-translational protein modification;3.9893624380992e-13!GO:0006333;chromatin assembly or disassembly;5.42877309876353e-13!GO:0009259;ribonucleotide metabolic process;6.75342860641748e-13!GO:0050657;nucleic acid transport;6.75342860641748e-13!GO:0051236;establishment of RNA localization;6.75342860641748e-13!GO:0050658;RNA transport;6.75342860641748e-13!GO:0006446;regulation of translational initiation;6.79465586941258e-13!GO:0003743;translation initiation factor activity;6.92216145836761e-13!GO:0008026;ATP-dependent helicase activity;7.05557242176275e-13!GO:0051082;unfolded protein binding;7.3824587918384e-13!GO:0006413;translational initiation;8.06682217502785e-13!GO:0006403;RNA localization;8.61784990781602e-13!GO:0006163;purine nucleotide metabolic process;1.02322606327439e-12!GO:0005643;nuclear pore;1.62996197656448e-12!GO:0006164;purine nucleotide biosynthetic process;2.2887792609394e-12!GO:0009260;ribonucleotide biosynthetic process;4.73913245712986e-12!GO:0017038;protein import;4.89894220322421e-12!GO:0006364;rRNA processing;7.28361189647384e-12!GO:0016607;nuclear speck;9.56260093456738e-12!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.16156808096479e-11!GO:0012501;programmed cell death;1.26706359068584e-11!GO:0016072;rRNA metabolic process;1.26706359068584e-11!GO:0016787;hydrolase activity;1.27226361112731e-11!GO:0009150;purine ribonucleotide metabolic process;1.29300063932373e-11!GO:0006915;apoptosis;1.63490526862942e-11!GO:0065002;intracellular protein transport across a membrane;1.98081942255128e-11!GO:0009152;purine ribonucleotide biosynthetic process;2.87582632445211e-11!GO:0016779;nucleotidyltransferase activity;3.23790647562885e-11!GO:0051028;mRNA transport;4.37071010349805e-11!GO:0065004;protein-DNA complex assembly;6.14514160369473e-11!GO:0046930;pore complex;6.45284154493547e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;6.55273068063605e-11!GO:0009056;catabolic process;6.8161851811661e-11!GO:0044432;endoplasmic reticulum part;1.47189616538596e-10!GO:0016192;vesicle-mediated transport;1.97810567955837e-10!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;1.98124088732483e-10!GO:0016740;transferase activity;2.09828461410037e-10!GO:0009060;aerobic respiration;2.51845276138719e-10!GO:0008639;small protein conjugating enzyme activity;2.8255354067309e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.4396323255349e-10!GO:0008219;cell death;3.69208627453809e-10!GO:0016265;death;3.69208627453809e-10!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;5.14735970804518e-10!GO:0043566;structure-specific DNA binding;5.4008297501967e-10!GO:0005783;endoplasmic reticulum;6.30908410799632e-10!GO:0004842;ubiquitin-protein ligase activity;8.15563146691628e-10!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;8.25438435555152e-10!GO:0004812;aminoacyl-tRNA ligase activity;8.25438435555152e-10!GO:0016875;ligase activity, forming carbon-oxygen bonds;8.25438435555152e-10!GO:0030532;small nuclear ribonucleoprotein complex;9.17480709299363e-10!GO:0019787;small conjugating protein ligase activity;1.12735645741991e-09!GO:0019829;cation-transporting ATPase activity;1.12735645741991e-09!GO:0009055;electron carrier activity;1.18773082831895e-09!GO:0051188;cofactor biosynthetic process;1.19258698823783e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.24340114927162e-09!GO:0006261;DNA-dependent DNA replication;1.36362738655188e-09!GO:0048193;Golgi vesicle transport;1.39001135547275e-09!GO:0006366;transcription from RNA polymerase II promoter;1.60371379634112e-09!GO:0045333;cellular respiration;2.45195811438034e-09!GO:0043038;amino acid activation;2.46772401931028e-09!GO:0006418;tRNA aminoacylation for protein translation;2.46772401931028e-09!GO:0043039;tRNA aminoacylation;2.46772401931028e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.61540459515051e-09!GO:0008565;protein transporter activity;3.70892096074591e-09!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.4161335776197e-09!GO:0003697;single-stranded DNA binding;5.43352227730856e-09!GO:0005819;spindle;6.09910034779902e-09!GO:0015986;ATP synthesis coupled proton transport;6.96851581828162e-09!GO:0015985;energy coupled proton transport, down electrochemical gradient;6.96851581828162e-09!GO:0009141;nucleoside triphosphate metabolic process;7.98844771110702e-09!GO:0009199;ribonucleoside triphosphate metabolic process;8.06183160139542e-09!GO:0009142;nucleoside triphosphate biosynthetic process;8.18934931982076e-09!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.18934931982076e-09!GO:0006606;protein import into nucleus;9.73195182732953e-09!GO:0051170;nuclear import;1.10189021387396e-08!GO:0006461;protein complex assembly;1.11566768315203e-08!GO:0009117;nucleotide metabolic process;1.16496086557118e-08!GO:0003712;transcription cofactor activity;1.20674250650938e-08!GO:0000775;chromosome, pericentric region;1.34371333176272e-08!GO:0016881;acid-amino acid ligase activity;1.42562198389633e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.79329691027284e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.79329691027284e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.90509427316872e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.90509427316872e-08!GO:0050794;regulation of cellular process;2.05192024223537e-08!GO:0051246;regulation of protein metabolic process;2.06216416819999e-08!GO:0005789;endoplasmic reticulum membrane;2.07324419978344e-08!GO:0015630;microtubule cytoskeleton;4.29147643906711e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.59806090416097e-08!GO:0006310;DNA recombination;5.29477157320997e-08!GO:0006754;ATP biosynthetic process;5.53667275357223e-08!GO:0006753;nucleoside phosphate metabolic process;5.53667275357223e-08!GO:0031497;chromatin assembly;5.79753309950743e-08!GO:0006084;acetyl-CoA metabolic process;6.57451111514923e-08!GO:0006099;tricarboxylic acid cycle;6.65890549874073e-08!GO:0046356;acetyl-CoA catabolic process;6.65890549874073e-08!GO:0046034;ATP metabolic process;7.36051041385887e-08!GO:0006793;phosphorus metabolic process;7.93606227280193e-08!GO:0006796;phosphate metabolic process;7.93606227280193e-08!GO:0003899;DNA-directed RNA polymerase activity;8.97913885749059e-08!GO:0051329;interphase of mitotic cell cycle;9.32980238863016e-08!GO:0006752;group transfer coenzyme metabolic process;9.39816216802827e-08!GO:0016469;proton-transporting two-sector ATPase complex;9.39816216802827e-08!GO:0005839;proteasome core complex (sensu Eukaryota);9.40641382740212e-08!GO:0006334;nucleosome assembly;1.09186343922404e-07!GO:0009108;coenzyme biosynthetic process;1.51718714618203e-07!GO:0051325;interphase;1.51845750844593e-07!GO:0016310;phosphorylation;1.59175531686808e-07!GO:0032446;protein modification by small protein conjugation;1.64095853271256e-07!GO:0005813;centrosome;1.75377853184805e-07!GO:0005815;microtubule organizing center;2.17610770001424e-07!GO:0016567;protein ubiquitination;3.50254494737075e-07!GO:0045259;proton-transporting ATP synthase complex;3.97263469294029e-07!GO:0004298;threonine endopeptidase activity;4.06121705794214e-07!GO:0009109;coenzyme catabolic process;4.4918158418156e-07!GO:0007005;mitochondrion organization and biogenesis;4.69711407684425e-07!GO:0000245;spliceosome assembly;4.77433660376845e-07!GO:0006401;RNA catabolic process;6.45798030545075e-07!GO:0019222;regulation of metabolic process;7.88032197770113e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;7.88631635924604e-07!GO:0008094;DNA-dependent ATPase activity;8.00121948227427e-07!GO:0005657;replication fork;9.88943975144069e-07!GO:0005794;Golgi apparatus;9.92623275757383e-07!GO:0003724;RNA helicase activity;1.60203364098493e-06!GO:0009165;nucleotide biosynthetic process;1.6182360252753e-06!GO:0042981;regulation of apoptosis;1.65789314439433e-06!GO:0005768;endosome;2.12517029192346e-06!GO:0043067;regulation of programmed cell death;2.21355818030213e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.42039525780766e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;2.83121826672459e-06!GO:0015399;primary active transmembrane transporter activity;2.83121826672459e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.91883434939326e-06!GO:0000151;ubiquitin ligase complex;3.06106637584063e-06!GO:0051187;cofactor catabolic process;3.06276856221084e-06!GO:0005762;mitochondrial large ribosomal subunit;3.47281358429079e-06!GO:0000315;organellar large ribosomal subunit;3.47281358429079e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;3.78397620532498e-06!GO:0003682;chromatin binding;3.98076256491737e-06!GO:0016741;transferase activity, transferring one-carbon groups;4.47415821846922e-06!GO:0008168;methyltransferase activity;4.4746712704715e-06!GO:0000075;cell cycle checkpoint;5.13305713073838e-06!GO:0051168;nuclear export;5.31095990235973e-06!GO:0006302;double-strand break repair;5.5795845077769e-06!GO:0005793;ER-Golgi intermediate compartment;5.73161979092852e-06!GO:0004518;nuclease activity;6.39954224423457e-06!GO:0005773;vacuole;6.73584334721104e-06!GO:0000323;lytic vacuole;8.31912243203408e-06!GO:0005764;lysosome;8.31912243203408e-06!GO:0048475;coated membrane;8.54294220532404e-06!GO:0030117;membrane coat;8.54294220532404e-06!GO:0050789;regulation of biological process;8.75147384934682e-06!GO:0003713;transcription coactivator activity;1.14342137362491e-05!GO:0007051;spindle organization and biogenesis;1.22040677901255e-05!GO:0006613;cotranslational protein targeting to membrane;1.27131551775549e-05!GO:0005667;transcription factor complex;1.28017782326567e-05!GO:0003678;DNA helicase activity;1.57929546325821e-05!GO:0045786;negative regulation of progression through cell cycle;1.88936266873264e-05!GO:0051427;hormone receptor binding;1.89412901059282e-05!GO:0031323;regulation of cellular metabolic process;1.92677388806846e-05!GO:0031324;negative regulation of cellular metabolic process;1.98896336811956e-05!GO:0048523;negative regulation of cellular process;2.01791412625342e-05!GO:0003690;double-stranded DNA binding;2.08227610616137e-05!GO:0006091;generation of precursor metabolites and energy;2.61550562852512e-05!GO:0006402;mRNA catabolic process;2.80713932784201e-05!GO:0003729;mRNA binding;2.80713932784201e-05!GO:0016491;oxidoreductase activity;2.87627078818575e-05!GO:0008033;tRNA processing;3.06244027570759e-05!GO:0043623;cellular protein complex assembly;3.12025002787143e-05!GO:0043492;ATPase activity, coupled to movement of substances;3.19817573733866e-05!GO:0007088;regulation of mitosis;3.36652113699715e-05!GO:0030120;vesicle coat;3.36652113699715e-05!GO:0030662;coated vesicle membrane;3.36652113699715e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.55512715522784e-05!GO:0016363;nuclear matrix;3.80580254678948e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;3.87613219986552e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;4.11659624132771e-05!GO:0035257;nuclear hormone receptor binding;4.12798231777944e-05!GO:0044452;nucleolar part;4.20723383892064e-05!GO:0005770;late endosome;4.20723383892064e-05!GO:0065009;regulation of a molecular function;4.24254366151875e-05!GO:0003684;damaged DNA binding;6.50475350577623e-05!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;6.95269868699852e-05!GO:0006818;hydrogen transport;7.29043624492354e-05!GO:0015992;proton transport;7.49014878655473e-05!GO:0019899;enzyme binding;7.75882195555811e-05!GO:0006414;translational elongation;7.95331736109102e-05!GO:0006888;ER to Golgi vesicle-mediated transport;8.25574816447577e-05!GO:0006612;protein targeting to membrane;8.25687642574889e-05!GO:0008186;RNA-dependent ATPase activity;8.48737641159629e-05!GO:0000314;organellar small ribosomal subunit;8.74632457735417e-05!GO:0005763;mitochondrial small ribosomal subunit;8.74632457735417e-05!GO:0006950;response to stress;9.01903631616595e-05!GO:0000786;nucleosome;0.000107018333061606!GO:0043021;ribonucleoprotein binding;0.000124206233435325!GO:0015980;energy derivation by oxidation of organic compounds;0.000126488289661383!GO:0007249;I-kappaB kinase/NF-kappaB cascade;0.000126558932353269!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000127844821719922!GO:0006417;regulation of translation;0.000136330024492073!GO:0032508;DNA duplex unwinding;0.000144066171504686!GO:0032392;DNA geometric change;0.000144066171504686!GO:0007059;chromosome segregation;0.000155272460176803!GO:0006383;transcription from RNA polymerase III promoter;0.000155655158331874!GO:0043069;negative regulation of programmed cell death;0.000159829192014196!GO:0030880;RNA polymerase complex;0.000165279784085265!GO:0006916;anti-apoptosis;0.000166647062967786!GO:0046483;heterocycle metabolic process;0.000169168636943621!GO:0004527;exonuclease activity;0.000184637471678529!GO:0016853;isomerase activity;0.000184808008787708!GO:0043066;negative regulation of apoptosis;0.000199835269986997!GO:0043681;protein import into mitochondrion;0.00020542105275169!GO:0051052;regulation of DNA metabolic process;0.00020683064601763!GO:0005885;Arp2/3 protein complex;0.000207411460409077!GO:0048519;negative regulation of biological process;0.000245474578960906!GO:0007006;mitochondrial membrane organization and biogenesis;0.000258759707133125!GO:0004004;ATP-dependent RNA helicase activity;0.000263610033607007!GO:0005798;Golgi-associated vesicle;0.000267377229057824!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000276166500906452!GO:0008654;phospholipid biosynthetic process;0.000298347154181047!GO:0006352;transcription initiation;0.000310561802868198!GO:0031968;organelle outer membrane;0.000317764248286926!GO:0000776;kinetochore;0.000319660763710212!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;0.000319660763710212!GO:0006350;transcription;0.000321407448786688!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000327552197644265!GO:0016563;transcription activator activity;0.000341743489143145!GO:0006268;DNA unwinding during replication;0.000345176598099557!GO:0005769;early endosome;0.000355240329787364!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.000355774900041946!GO:0000428;DNA-directed RNA polymerase complex;0.000355774900041946!GO:0016481;negative regulation of transcription;0.000364807864820623!GO:0016564;transcription repressor activity;0.000377979470259724!GO:0045454;cell redox homeostasis;0.000391319924618283!GO:0019752;carboxylic acid metabolic process;0.000406185371264468!GO:0006338;chromatin remodeling;0.000406185371264468!GO:0006626;protein targeting to mitochondrion;0.000410169833803194!GO:0000118;histone deacetylase complex;0.000416335818843327!GO:0019867;outer membrane;0.000429563708597245!GO:0006082;organic acid metabolic process;0.000454058802656455!GO:0009892;negative regulation of metabolic process;0.000459229364471694!GO:0016251;general RNA polymerase II transcription factor activity;0.000469187573147264!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000471813400127764!GO:0006405;RNA export from nucleus;0.000475665956768224!GO:0009124;nucleoside monophosphate biosynthetic process;0.000483988773019361!GO:0009123;nucleoside monophosphate metabolic process;0.000483988773019361!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.000500084064889431!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.000593388303212553!GO:0000082;G1/S transition of mitotic cell cycle;0.000600631860230251!GO:0031326;regulation of cellular biosynthetic process;0.00060346759080501!GO:0007093;mitotic cell cycle checkpoint;0.000604915510886875!GO:0006284;base-excision repair;0.000608028609158205!GO:0016281;eukaryotic translation initiation factor 4F complex;0.000631530384844375!GO:0010468;regulation of gene expression;0.000679805826158249!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.000682417263064324!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.000682417263064324!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.000682417263064324!GO:0005684;U2-dependent spliceosome;0.000750770932835654!GO:0006839;mitochondrial transport;0.000797229467475265!GO:0004674;protein serine/threonine kinase activity;0.00080681305214149!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;0.000826768679209635!GO:0000287;magnesium ion binding;0.00093454807685984!GO:0000922;spindle pole;0.000935423154617028!GO:0031072;heat shock protein binding;0.00102636186012075!GO:0005741;mitochondrial outer membrane;0.00110883822073494!GO:0000228;nuclear chromosome;0.00115008837889761!GO:0005637;nuclear inner membrane;0.00116628105988193!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00116628105988193!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00116628105988193!GO:0009161;ribonucleoside monophosphate metabolic process;0.00121354627209817!GO:0009156;ribonucleoside monophosphate biosynthetic process;0.00121354627209817!GO:0000049;tRNA binding;0.00123095069594439!GO:0030384;phosphoinositide metabolic process;0.00142002556041951!GO:0006650;glycerophospholipid metabolic process;0.0015083426453344!GO:0043414;biopolymer methylation;0.00155294156216117!GO:0005774;vacuolar membrane;0.00156423663153422!GO:0006520;amino acid metabolic process;0.00163106625812167!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00167858569657649!GO:0048500;signal recognition particle;0.00175689952236846!GO:0006289;nucleotide-excision repair;0.00184072895926652!GO:0008047;enzyme activator activity;0.00184248739108399!GO:0044440;endosomal part;0.00185606450914245!GO:0010008;endosome membrane;0.00185606450914245!GO:0046474;glycerophospholipid biosynthetic process;0.0019205361932827!GO:0051252;regulation of RNA metabolic process;0.00193064610284682!GO:0008757;S-adenosylmethionine-dependent methyltransferase activity;0.00193064610284682!GO:0009112;nucleobase metabolic process;0.00194162390868566!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00204882760308927!GO:0032259;methylation;0.00216219458822406!GO:0032200;telomere organization and biogenesis;0.00224393687317808!GO:0000723;telomere maintenance;0.00224393687317808!GO:0016197;endosome transport;0.00225114419621879!GO:0051287;NAD binding;0.00236115420382993!GO:0042393;histone binding;0.0023694264326939!GO:0005876;spindle microtubule;0.0023727884015024!GO:0042802;identical protein binding;0.00242777800957555!GO:0046822;regulation of nucleocytoplasmic transport;0.00248700217542145!GO:0000792;heterochromatin;0.00256130395605127!GO:0006730;one-carbon compound metabolic process;0.00256992428693412!GO:0000059;protein import into nucleus, docking;0.00263012819361661!GO:0004003;ATP-dependent DNA helicase activity;0.0027019387048151!GO:0003677;DNA binding;0.00272471839664756!GO:0047485;protein N-terminus binding;0.00276585683272226!GO:0009451;RNA modification;0.00282124271043361!GO:0005788;endoplasmic reticulum lumen;0.00282222003965664!GO:0009127;purine nucleoside monophosphate biosynthetic process;0.00283031393664047!GO:0009167;purine ribonucleoside monophosphate metabolic process;0.00283031393664047!GO:0009126;purine nucleoside monophosphate metabolic process;0.00283031393664047!GO:0009168;purine ribonucleoside monophosphate biosynthetic process;0.00283031393664047!GO:0009615;response to virus;0.00290648823076247!GO:0008312;7S RNA binding;0.0029456151578225!GO:0008632;apoptotic program;0.00303508780799867!GO:0050790;regulation of catalytic activity;0.00304769393919736!GO:0044431;Golgi apparatus part;0.00306569034619664!GO:0003725;double-stranded RNA binding;0.00306935608224286!GO:0003887;DNA-directed DNA polymerase activity;0.00306935608224286!GO:0046489;phosphoinositide biosynthetic process;0.00306935608224286!GO:0005048;signal sequence binding;0.00311925603543545!GO:0009889;regulation of biosynthetic process;0.00311925603543545!GO:0044437;vacuolar part;0.00335270451274355!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00341163017283693!GO:0043596;nuclear replication fork;0.00343470973936195!GO:0005665;DNA-directed RNA polymerase II, core complex;0.00344080273007543!GO:0031124;mRNA 3'-end processing;0.0034483678720994!GO:0003711;transcription elongation regulator activity;0.0035487891561632!GO:0006611;protein export from nucleus;0.00361768549692099!GO:0044262;cellular carbohydrate metabolic process;0.00363764816962983!GO:0031982;vesicle;0.00363764816962983!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00405446474546903!GO:0007243;protein kinase cascade;0.00415867066257353!GO:0022890;inorganic cation transmembrane transporter activity;0.00421918181054558!GO:0015631;tubulin binding;0.00432617927299898!GO:0005525;GTP binding;0.0044373423138427!GO:0051539;4 iron, 4 sulfur cluster binding;0.00445025330789637!GO:0043284;biopolymer biosynthetic process;0.00471497193745539!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00478957335958242!GO:0045047;protein targeting to ER;0.00478957335958242!GO:0006270;DNA replication initiation;0.00480100839469693!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00488647805493023!GO:0003714;transcription corepressor activity;0.00492080556309815!GO:0008234;cysteine-type peptidase activity;0.00495029474796155!GO:0065007;biological regulation;0.00502826063320796!GO:0040029;regulation of gene expression, epigenetic;0.00504138462292903!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00506105549637413!GO:0050662;coenzyme binding;0.00518410135033093!GO:0030118;clathrin coat;0.00526621434073562!GO:0005874;microtubule;0.00531592809934319!GO:0000152;nuclear ubiquitin ligase complex;0.00531592809934319!GO:0031988;membrane-bound vesicle;0.00541693020779539!GO:0035258;steroid hormone receptor binding;0.0056007158275006!GO:0051920;peroxiredoxin activity;0.00560929693022663!GO:0008276;protein methyltransferase activity;0.00574415354824434!GO:0008408;3'-5' exonuclease activity;0.00576450743103587!GO:0016569;covalent chromatin modification;0.00580373604139154!GO:0006144;purine base metabolic process;0.00611250705712512!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00617171288208901!GO:0015002;heme-copper terminal oxidase activity;0.00617171288208901!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00617171288208901!GO:0004129;cytochrome-c oxidase activity;0.00617171288208901!GO:0005765;lysosomal membrane;0.00620356037552515!GO:0006595;polyamine metabolic process;0.0062688784869711!GO:0016407;acetyltransferase activity;0.00629660758186595!GO:0030176;integral to endoplasmic reticulum membrane;0.00637379283345184!GO:0007052;mitotic spindle organization and biogenesis;0.00637456307605758!GO:0048471;perinuclear region of cytoplasm;0.00639506576732528!GO:0051540;metal cluster binding;0.00647044548512603!GO:0051536;iron-sulfur cluster binding;0.00647044548512603!GO:0045045;secretory pathway;0.00647808532644343!GO:0008139;nuclear localization sequence binding;0.00654624979180661!GO:0006607;NLS-bearing substrate import into nucleus;0.0068509452881076!GO:0031410;cytoplasmic vesicle;0.00699749273472161!GO:0016796;exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.00713402429803478!GO:0046966;thyroid hormone receptor binding;0.00737943131332699!GO:0016584;nucleosome positioning;0.00783226118670788!GO:0016859;cis-trans isomerase activity;0.00783226118670788!GO:0043488;regulation of mRNA stability;0.00784043078628326!GO:0043487;regulation of RNA stability;0.00784043078628326!GO:0004177;aminopeptidase activity;0.00784493149949688!GO:0006220;pyrimidine nucleotide metabolic process;0.00792026999963088!GO:0000339;RNA cap binding;0.00793326043394894!GO:0000910;cytokinesis;0.00798604509922944!GO:0003924;GTPase activity;0.00812232281179942!GO:0030867;rough endoplasmic reticulum membrane;0.00814671515793971!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00829488097275135!GO:0016272;prefoldin complex;0.00849082571705508!GO:0022415;viral reproductive process;0.00858190106349496!GO:0007017;microtubule-based process;0.00866721251353786!GO:0006891;intra-Golgi vesicle-mediated transport;0.00882598946830548!GO:0004532;exoribonuclease activity;0.00890826237897308!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.00890826237897308!GO:0015036;disulfide oxidoreductase activity;0.00897465816727991!GO:0000726;non-recombinational repair;0.00910864602046482!GO:0043065;positive regulation of apoptosis;0.00926361849557784!GO:0016023;cytoplasmic membrane-bound vesicle;0.00936478877273804!GO:0030521;androgen receptor signaling pathway;0.00945032298545212!GO:0030119;AP-type membrane coat adaptor complex;0.00946919434549161!GO:0000178;exosome (RNase complex);0.00950620946404599!GO:0032981;mitochondrial respiratory chain complex I assembly;0.00964386396309755!GO:0010257;NADH dehydrogenase complex assembly;0.00964386396309755!GO:0033108;mitochondrial respiratory chain complex assembly;0.00964386396309755!GO:0016408;C-acyltransferase activity;0.00967295609958992!GO:0009303;rRNA transcription;0.00967600211433308!GO:0031123;RNA 3'-end processing;0.010367340012571!GO:0030131;clathrin adaptor complex;0.010489033548213!GO:0031570;DNA integrity checkpoint;0.0105272485824369!GO:0019783;small conjugating protein-specific protease activity;0.0105272485824369!GO:0051087;chaperone binding;0.0106163798566408!GO:0030658;transport vesicle membrane;0.0108965941947437!GO:0030663;COPI coated vesicle membrane;0.0110962749900035!GO:0030126;COPI vesicle coat;0.0110962749900035!GO:0005832;chaperonin-containing T-complex;0.0112814089856549!GO:0008017;microtubule binding;0.0113362636281098!GO:0043068;positive regulation of programmed cell death;0.01139154201797!GO:0030518;steroid hormone receptor signaling pathway;0.0113980103706411!GO:0007040;lysosome organization and biogenesis;0.0113980103706411!GO:0009081;branched chain family amino acid metabolic process;0.0115012831947592!GO:0007007;inner mitochondrial membrane organization and biogenesis;0.0118092491755495!GO:0032774;RNA biosynthetic process;0.011910045544851!GO:0000781;chromosome, telomeric region;0.0120120720618352!GO:0051098;regulation of binding;0.0120500598763213!GO:0004540;ribonuclease activity;0.0120832644399787!GO:0032940;secretion by cell;0.0123495605192978!GO:0003702;RNA polymerase II transcription factor activity;0.0123495605192978!GO:0005669;transcription factor TFIID complex;0.0125441770953936!GO:0004843;ubiquitin-specific protease activity;0.0128120041034387!GO:0048487;beta-tubulin binding;0.0129075926538501!GO:0043022;ribosome binding;0.0129553466248595!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0130492601261757!GO:0006733;oxidoreduction coenzyme metabolic process;0.0130975634040245!GO:0051789;response to protein stimulus;0.0132156073069769!GO:0006986;response to unfolded protein;0.0132156073069769!GO:0007050;cell cycle arrest;0.0132172269021234!GO:0043601;nuclear replisome;0.0132408104799392!GO:0030894;replisome;0.0132408104799392!GO:0006779;porphyrin biosynthetic process;0.013459264951884!GO:0033014;tetrapyrrole biosynthetic process;0.013459264951884!GO:0006406;mRNA export from nucleus;0.0134964755847651!GO:0006118;electron transport;0.0135714832253529!GO:0006740;NADPH regeneration;0.0135714832253529!GO:0006098;pentose-phosphate shunt;0.0135714832253529!GO:0030132;clathrin coat of coated pit;0.0137105860325373!GO:0051053;negative regulation of DNA metabolic process;0.0137273433894393!GO:0016790;thiolester hydrolase activity;0.01373213289507!GO:0006351;transcription, DNA-dependent;0.0139634083906491!GO:0030137;COPI-coated vesicle;0.0142522223758066!GO:0019843;rRNA binding;0.0143582434606121!GO:0033116;ER-Golgi intermediate compartment membrane;0.0143582434606121!GO:0031647;regulation of protein stability;0.0145391279013575!GO:0018193;peptidyl-amino acid modification;0.0145391279013575!GO:0030433;ER-associated protein catabolic process;0.0147689213279164!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0147689213279164!GO:0000725;recombinational repair;0.0149694265325277!GO:0000724;double-strand break repair via homologous recombination;0.0149694265325277!GO:0016570;histone modification;0.0151937805014786!GO:0019206;nucleoside kinase activity;0.0155461340553178!GO:0009116;nucleoside metabolic process;0.0161587572354678!GO:0005652;nuclear lamina;0.016415196371612!GO:0006917;induction of apoptosis;0.0167465457643232!GO:0043189;H4/H2A histone acetyltransferase complex;0.0172482081423448!GO:0030660;Golgi-associated vesicle membrane;0.0173327351059223!GO:0031252;leading edge;0.0173724828334631!GO:0046112;nucleobase biosynthetic process;0.0174119830289537!GO:0000123;histone acetyltransferase complex;0.0175202573418579!GO:0008022;protein C-terminus binding;0.0175325226347471!GO:0044454;nuclear chromosome part;0.0176268122466005!GO:0006376;mRNA splice site selection;0.0177793632627428!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0177793632627428!GO:0006275;regulation of DNA replication;0.0177793632627428!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0178658906334733!GO:0035267;NuA4 histone acetyltransferase complex;0.0178658906334733!GO:0048037;cofactor binding;0.0180718338629969!GO:0046983;protein dimerization activity;0.0182225202850544!GO:0050851;antigen receptor-mediated signaling pathway;0.0183292766884174!GO:0004576;oligosaccharyl transferase activity;0.0185163699586308!GO:0007033;vacuole organization and biogenesis;0.0185287580286715!GO:0016891;endoribonuclease activity, producing 5'-phosphomonoesters;0.0186399352115783!GO:0003746;translation elongation factor activity;0.0193803128130333!GO:0051223;regulation of protein transport;0.0193854991662185!GO:0006378;mRNA polyadenylation;0.0193854991662185!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.0194043339776611!GO:0006497;protein amino acid lipidation;0.0196587519090169!GO:0006672;ceramide metabolic process;0.0197841313400507!GO:0051656;establishment of organelle localization;0.0197989590622665!GO:0016893;endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters;0.0204141669218298!GO:0006767;water-soluble vitamin metabolic process;0.0204575238654866!GO:0012502;induction of programmed cell death;0.0206093169523177!GO:0007021;tubulin folding;0.0207338121822627!GO:0045947;negative regulation of translational initiation;0.020948987182414!GO:0000139;Golgi membrane;0.0210577626811454!GO:0000018;regulation of DNA recombination;0.0211487853132381!GO:0006506;GPI anchor biosynthetic process;0.0213367943556598!GO:0030041;actin filament polymerization;0.0220400895816955!GO:0031577;spindle checkpoint;0.0224031724268323!GO:0048522;positive regulation of cellular process;0.0224277907214657!GO:0006007;glucose catabolic process;0.0226186448191077!GO:0004221;ubiquitin thiolesterase activity;0.0231460924254319!GO:0008250;oligosaccharyl transferase complex;0.0233673139475899!GO:0045892;negative regulation of transcription, DNA-dependent;0.0237628724293935!GO:0002757;immune response-activating signal transduction;0.0239927068998443!GO:0031902;late endosome membrane;0.0246831188704439!GO:0005092;GDP-dissociation inhibitor activity;0.0250923074185789!GO:0008538;proteasome activator activity;0.0255857548825393!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.025689664415012!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0259913465046813!GO:0005096;GTPase activator activity;0.0260207656217141!GO:0006400;tRNA modification;0.0260816102070866!GO:0042770;DNA damage response, signal transduction;0.0261680886715131!GO:0004428;inositol or phosphatidylinositol kinase activity;0.0266785908885567!GO:0032561;guanyl ribonucleotide binding;0.0268232870808539!GO:0019001;guanyl nucleotide binding;0.0268232870808539!GO:0005680;anaphase-promoting complex;0.0268232870808539!GO:0005663;DNA replication factor C complex;0.0269168493580903!GO:0004448;isocitrate dehydrogenase activity;0.0269454202394625!GO:0005996;monosaccharide metabolic process;0.0270720066934703!GO:0005869;dynactin complex;0.0271454253442581!GO:0046467;membrane lipid biosynthetic process;0.0273395459951212!GO:0000819;sister chromatid segregation;0.0276445516142849!GO:0006519;amino acid and derivative metabolic process;0.0281021157344809!GO:0032039;integrator complex;0.0282899065729657!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0284511863905265!GO:0046519;sphingoid metabolic process;0.0284511863905265!GO:0004722;protein serine/threonine phosphatase activity;0.0290357317577259!GO:0000077;DNA damage checkpoint;0.0291443443226328!GO:0006505;GPI anchor metabolic process;0.0291771752098868!GO:0016044;membrane organization and biogenesis;0.0294511540187986!GO:0006778;porphyrin metabolic process;0.0297829606670959!GO:0033013;tetrapyrrole metabolic process;0.0297829606670959!GO:0005758;mitochondrial intermembrane space;0.0298672649016353!GO:0051320;S phase;0.0301831246467995!GO:0008097;5S rRNA binding;0.0303405799318547!GO:0019318;hexose metabolic process;0.0303405799318547!GO:0046426;negative regulation of JAK-STAT cascade;0.030506408801007!GO:0033558;protein deacetylase activity;0.0306968575445045!GO:0042826;histone deacetylase binding;0.0307660358142939!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0307705633179086!GO:0000070;mitotic sister chromatid segregation;0.0307718438765618!GO:0044450;microtubule organizing center part;0.031011485988692!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0314599266140601!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.0317339378140909!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.031822010696071!GO:0008213;protein amino acid alkylation;0.0318992700151257!GO:0006479;protein amino acid methylation;0.0318992700151257!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0333014288349772!GO:0045449;regulation of transcription;0.0333746759816751!GO:0009083;branched chain family amino acid catabolic process;0.0336241216765109!GO:0045815;positive regulation of gene expression, epigenetic;0.0337020490509797!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0337431356036385!GO:0008170;N-methyltransferase activity;0.0345059711407321!GO:0004407;histone deacetylase activity;0.0346470130147797!GO:0004748;ribonucleoside-diphosphate reductase activity;0.0349469864686617!GO:0016728;oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor;0.0349469864686617!GO:0005784;translocon complex;0.0368662259231956!GO:0002764;immune response-regulating signal transduction;0.0377698401886526!GO:0030522;intracellular receptor-mediated signaling pathway;0.0381374918244323!GO:0031371;ubiquitin conjugating enzyme complex;0.0381374918244323!GO:0046365;monosaccharide catabolic process;0.0381374918244323!GO:0008180;signalosome;0.0381374918244323!GO:0051235;maintenance of localization;0.0382395459482773!GO:0042158;lipoprotein biosynthetic process;0.0387467428729699!GO:0051640;organelle localization;0.0388974720184044!GO:0030508;thiol-disulfide exchange intermediate activity;0.0390410216392672!GO:0030911;TPR domain binding;0.0391410756562327!GO:0000790;nuclear chromatin;0.0392922852243917!GO:0007034;vacuolar transport;0.0394031052627299!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0396053490794978!GO:0019213;deacetylase activity;0.0396568538961013!GO:0019079;viral genome replication;0.0398760067310664!GO:0030134;ER to Golgi transport vesicle;0.0405946493561358!GO:0000175;3'-5'-exoribonuclease activity;0.0406888907872544!GO:0005905;coated pit;0.0407475962550008!GO:0006695;cholesterol biosynthetic process;0.0407700500474873!GO:0008143;poly(A) binding;0.0414004282580078!GO:0008637;apoptotic mitochondrial changes;0.0419667981072703!GO:0004659;prenyltransferase activity;0.0429263702667444!GO:0000209;protein polyubiquitination;0.0435509390234876!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.043641620477538!GO:0050681;androgen receptor binding;0.043641620477538!GO:0031970;organelle envelope lumen;0.0446621603107634!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0447341219506996!GO:0007242;intracellular signaling cascade;0.0450135362173546!GO:0016581;NuRD complex;0.0450686158787313!GO:0006635;fatty acid beta-oxidation;0.0451080327228508!GO:0017134;fibroblast growth factor binding;0.0455620504400773!GO:0050853;B cell receptor signaling pathway;0.0455653473158024!GO:0006596;polyamine biosynthetic process;0.0461477407730795!GO:0005850;eukaryotic translation initiation factor 2 complex;0.046176468708046!GO:0007004;telomere maintenance via telomerase;0.0463917470673069!GO:0051452;cellular pH reduction;0.0463917470673069!GO:0051453;regulation of cellular pH;0.0463917470673069!GO:0045851;pH reduction;0.0463917470673069!GO:0044438;microbody part;0.0463917470673069!GO:0044439;peroxisomal part;0.0463917470673069!GO:0008652;amino acid biosynthetic process;0.0465883245117893!GO:0051338;regulation of transferase activity;0.0466568592893351!GO:0016788;hydrolase activity, acting on ester bonds;0.0470553546222082!GO:0033157;regulation of intracellular protein transport;0.048183914698613!GO:0042306;regulation of protein import into nucleus;0.048183914698613!GO:0004519;endonuclease activity;0.0482953905921819!GO:0042719;mitochondrial intermembrane space protein transporter complex;0.0483693162488567!GO:0045039;protein import into mitochondrial inner membrane;0.0483693162488567!GO:0008156;negative regulation of DNA replication;0.0489057871067598!GO:0004239;methionyl aminopeptidase activity;0.0491105063945015!GO:0008537;proteasome activator complex;0.0496131971899215
|sample_id=10765
|sample_note=
|sample_sex=male
|sample_species=Human (Homo sapiens)
|sample_strain=
|sample_tissue=blood
|top_motifs=MYB:2.2417740596;PITX1..3:2.0482046284;TOPORS:1.94426275848;RXR{A,B,G}_{NR1H2,PPAR}dimers:1.84783971164;FOXP1:1.53750124017;E2F1..5:1.3361348304;AIRE:1.27209333471;HOXA9_MEIS1:1.15589866305;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:1.15316318796;YY1:1.15301478208;POU1F1:1.13077549015;ELF1,2,4:1.05926096914;RUNX1..3:1.0511382386;NKX6-1,2:0.989074886919;SPIB:0.939089211339;SPI1:0.930478793421;DMAP1_NCOR{1,2}_SMARC:0.87237887064;BREu{core}:0.863701933856;ZBTB16:0.816593710842;FOXP3:0.789582567378;POU2F1..3:0.743567014652;CUX2:0.704688721733;SOX{8,9,10}:0.684502345915;FOXD3:0.673585459367;T:0.639037534917;ZNF143:0.576094836984;NANOG:0.567464095455;IKZF2:0.556017254612;NR5A1,2:0.548511558484;PPARG:0.535515375155;FOXA2:0.529887161128;ELK1,4_GABP{A,B1}:0.514950299331;FOXQ1:0.499500019624;ETS1,2:0.489008826209;NFY{A,B,C}:0.485102775128;HOX{A6,A7,B6,B7}:0.461223227235;PRRX1,2:0.446848734354;CDX1,2,4:0.424888878078;CRX:0.411631020162;HES1:0.376904062635;TEF:0.370788249276;ZNF384:0.353957338459;NKX2-3_NKX2-5:0.326213631177;NR6A1:0.307819898495;IRF1,2:0.304511133927;CREB1:0.299522654847;ARID5B:0.299512541578;POU3F1..4:0.287595830671;HOX{A4,D4}:0.282824969105;HBP1_HMGB_SSRP1_UBTF:0.273105664375;EVI1:0.236057631722;ESR1:0.235953381173;NRF1:0.235669992593;GATA6:0.190289853956;POU5F1:0.142305961138;TFDP1:0.140242241597;ALX1:0.114696654599;NKX2-2,8:0.114690415061;NKX3-1:0.111470053874;OCT4_SOX2{dimer}:0.109493461218;HAND1,2:0.0827543522744;PBX1:0.0769342683535;bHLH_family:0.0581579048038;BPTF:0.0506765705882;ATF5_CREB3:0.0455943270617;IRF7:0.044166703519;VSX1,2:0.0289780251092;EN1,2:0.0123398994847;SOX17:0.00198609728427;AR:0.000246504072033;RFX2..5_RFXANK_RFXAP:-0.0135644929733;PAX2:-0.0403644157551;ZNF238:-0.056535805182;DBP:-0.0737995930664;SREBF1,2:-0.07472449316;MYOD1:-0.0796717149466;HNF4A_NR2F1,2:-0.0939320640969;GFI1:-0.0970076722816;GCM1,2:-0.105472784231;NKX2-1,4:-0.139892071209;POU6F1:-0.139972599203;FOXM1:-0.146155049752;FOXO1,3,4:-0.150302078331;GATA4:-0.157759922703;PAX4:-0.160175193244;KLF4:-0.16857921636;SMAD1..7,9:-0.171976107727;ONECUT1,2:-0.182332158247;MEF2{A,B,C,D}:-0.186454379739;MYBL2:-0.193473128871;RORA:-0.204070615976;PAX3,7:-0.205117336694;FOXL1:-0.206852042041;NFKB1_REL_RELA:-0.211811525671;ZEB1:-0.213848634386;STAT1,3:-0.215101262261;NANOG{mouse}:-0.243177030832;HNF1A:-0.2502212659;TGIF1:-0.263979310428;RXR{A,B,G}:-0.277799010276;LHX3,4:-0.28951523044;FOX{F1,F2,J1}:-0.335558735245;REST:-0.346791475263;NFIL3:-0.349849877224;CEBPA,B_DDIT3:-0.361535213161;TLX2:-0.384529785141;PAX5:-0.399512757963;SOX5:-0.411025010979;MTF1:-0.474557873959;HMGA1,2:-0.485747244887;SOX2:-0.492215855407;NFE2:-0.501023464093;CDC5L:-0.506405375702;MYFfamily:-0.51438006906;UFEwm:-0.520993440177;FOX{I1,J2}:-0.521123189365;GTF2A1,2:-0.531844428419;RXRA_VDR{dimer}:-0.55527017473;FOS_FOS{B,L1}_JUN{B,D}:-0.558711800921;ZFP161:-0.60598911753;LMO2:-0.606383368515;FOSL2:-0.623067451716;STAT5{A,B}:-0.628978211166;NKX3-2:-0.633363901459;GZF1:-0.637025844548;PRDM1:-0.639179933985;HOX{A5,B5}:-0.644650766823;EP300:-0.647562489629;ATF4:-0.652612232152;MZF1:-0.652791638443;RBPJ:-0.663214481343;PDX1:-0.670844620464;FOXN1:-0.689247826836;NHLH1,2:-0.692986341551;ZNF148:-0.704258253981;EBF1:-0.709930385507;SNAI1..3:-0.710752078928;PAX6:-0.728790281891;AHR_ARNT_ARNT2:-0.731890318261;BACH2:-0.74845416868;NR1H4:-0.758588741277;TFAP4:-0.766342201586;HLF:-0.793962869948;SRF:-0.795777234914;ADNP_IRX_SIX_ZHX:-0.801935775433;TFAP2{A,C}:-0.828443918728;TP53:-0.834483556431;ALX4:-0.85823276519;XBP1:-0.885932335109;PAX8:-0.922564730057;GTF2I:-0.941764209131;ESRRA:-0.946882257694;HIF1A:-0.957315354699;TBP:-0.96228843207;LEF1_TCF7_TCF7L1,2:-0.963132251382;TFAP2B:-0.969100386109;EGR1..3:-0.981143399058;FOX{D1,D2}:-0.990490175856;HSF1,2:-1.00017136119;XCPE1{core}:-1.01202720273;MTE{core}:-1.01502471102;ZNF423:-1.02552432446;ZIC1..3:-1.03020359355;IKZF1:-1.03689982234;RREB1:-1.03961156169;MED-1{core}:-1.04514953506;HIC1:-1.04770307879;TAL1_TCF{3,4,12}:-1.04774246895;PATZ1:-1.07931053642;STAT2,4,6:-1.11009797505;MAZ:-1.11041900189;NFE2L2:-1.11338495984;ZBTB6:-1.16662216664;RFX1:-1.17177779631;ATF2:-1.18706183498;TLX1..3_NFIC{dimer}:-1.19439912796;TEAD1:-1.32204660731;NFIX:-1.3279331707;GLI1..3:-1.37568968569;MAFB:-1.42552408386;SP1:-1.44407185355;HMX1:-1.45582196207;GFI1B:-1.49467948135;TFCP2:-1.54638463661;NFE2L1:-1.59807684361;PAX1,9:-1.64178329185;SPZ1:-1.67580829611;ATF6:-1.69403577052;TBX4,5:-1.9519782545;NFATC1..3:-1.96773408795;NR3C1:-2.00324738844;JUN:-2.25133369619
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:10765-110E9;search_select_hide=table117:FF:10765-110E9
}}
}}

Latest revision as of 15:03, 3 June 2020

Name:acute myeloid leukemia (FAB M2) cell line:NKM-1
Species:Human (Homo sapiens)
Library ID:CNhs11864
Sample type:cell lines
Genomic View: UCSC
RefEX:Specific genes
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexmale
age33
cell typemyeloid progenitor cell
cell lineNKM-1
companyJAPAN HEALTH SCIENCES FOUNDATION - Health Science Research Resources Bank
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005633
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11864 CAGE DRX007805 DRR008677
Accession ID Hg19

Library idBAMCTSS
CNhs11864 DRZ000102 DRZ001487
Accession ID Hg38

Library idBAMCTSS
CNhs11864 DRZ011452 DRZ012837
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.386
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma0.452
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190.0299
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.14
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.0229
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19-0.00369
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.328
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0.163
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40.0893
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.111
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0.282
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0643
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0893
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.714
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach1.153
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.373
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.00205
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.0285
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small0.537
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.0937
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.163
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.106
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0.415
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11864

Jaspar motifP-value
MA0002.20.00995
MA0003.10.658
MA0004.10.0116
MA0006.10.453
MA0007.10.671
MA0009.10.898
MA0014.10.986
MA0017.10.0886
MA0018.20.0373
MA0019.10.0137
MA0024.15.68956e-4
MA0025.10.124
MA0027.10.0313
MA0028.10.00216
MA0029.10.945
MA0030.10.211
MA0031.10.225
MA0035.20.457
MA0038.10.0246
MA0039.20.243
MA0040.10.375
MA0041.10.324
MA0042.10.486
MA0043.10.0437
MA0046.10.203
MA0047.20.286
MA0048.10.141
MA0050.10.0199
MA0051.10.281
MA0052.10.579
MA0055.10.211
MA0057.10.944
MA0058.10.00723
MA0059.10.00103
MA0060.10.12
MA0061.10.93
MA0062.22.07004e-7
MA0065.20.102
MA0066.10.614
MA0067.10.938
MA0068.10.851
MA0069.10.372
MA0070.10.695
MA0071.10.263
MA0072.10.86
MA0073.10.791
MA0074.10.641
MA0076.10.00526
MA0077.10.964
MA0078.10.751
MA0079.20.468
MA0080.24.62369e-10
MA0081.10.00162
MA0083.10.0134
MA0084.10.675
MA0087.10.574
MA0088.10.0217
MA0090.13.50269e-4
MA0091.10.349
MA0092.10.482
MA0093.10.0162
MA0099.23.65868e-5
MA0100.10.00195
MA0101.10.156
MA0102.20.342
MA0103.10.622
MA0104.28.00642e-5
MA0105.10.0247
MA0106.10.485
MA0107.10.0189
MA0108.27.08617e-7
MA0111.10.429
MA0112.20.142
MA0113.10.762
MA0114.10.0723
MA0115.10.078
MA0116.15.75159e-4
MA0117.10.843
MA0119.10.324
MA0122.10.619
MA0124.10.872
MA0125.10.631
MA0131.10.0773
MA0135.10.0324
MA0136.12.01829e-15
MA0137.20.0124
MA0138.20.614
MA0139.10.583
MA0140.10.432
MA0141.10.16
MA0142.10.917
MA0143.10.831
MA0144.10.12
MA0145.10.399
MA0146.10.0079
MA0147.12.4977e-5
MA0148.10.295
MA0149.10.156
MA0150.10.188
MA0152.10.115
MA0153.10.0734
MA0154.10.00561
MA0155.10.732
MA0156.16.34431e-8
MA0157.10.636
MA0159.10.66
MA0160.10.282
MA0162.10.77
MA0163.11.20809e-11
MA0164.10.721
MA0258.10.0517
MA0259.10.044



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11864

Novel motifP-value
10.0304
100.0141
1000.178
1010.0622
1020.738
1030.689
1040.876
1050.93
1060.627
1070.903
1080.738
1090.141
110.0423
1100.127
1110.273
1120.589
1130.522
1140.261
1150.34
1160.216
1170.00442
1180.186
1190.173
120.78
1200.203
1210.936
1220.907
1232.72946e-5
1240.108
1250.362
1260.631
1270.343
1280.671
1290.296
130.0254
1300.938
1310.533
1320.967
1330.94
1340.541
1350.343
1360.358
1370.894
1380.551
1390.239
140.526
1400.38
1410.478
1420.307
1430.235
1440.947
1450.297
1460.98
1470.406
1480.0376
1490.832
150.196
1500.583
1510.411
1520.27
1530.961
1540.666
1550.111
1560.437
1570.397
1580.96
1590.521
160.956
1600.285
1610.12
1620.436
1630.221
1640.327
1650.569
1660.746
1670.179
1680.441
1690.102
170.705
180.751
190.574
20.545
200.523
210.0882
220.69
230.133
240.597
250.223
260.0176
270.453
280.842
290.0515
30.0824
300.136
310.84
320.399
330.647
340.776
350.127
360.0376
370.18
380.488
390.603
40.053
400.466
410.988
420.142
430.369
440.392
450.345
460.0572
470.0263
480.041
490.0533
50.988
500.916
510.739
520.617
530.0815
540.988
550.916
560.659
570.101
580.254
590.645
60.299
600.713
610.0966
620.208
630.318
640.201
650.988
660.167
670.82
680.844
690.155
70.114
700.288
710.0866
720.827
730.474
740.98
750.0182
760.0898
770.827
780.031
790.553
80.0731
800.361
810.208
820.4
830.86
840.621
850.528
860.117
870.0961
880.468
890.191
90.862
900.181
910.651
920.655
930.576
940.498
950.0795
960.604
970.357
980.299
990.675



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11864


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0000763 (myeloid cell)
0002371 (somatic cell)
0000255 (eukaryotic cell)

DOID: Disease
4 (disease)
0050686 (organ system cancer)
162 (cancer)
2531 (hematologic cancer)
14566 (disease of cellular proliferation)
0060083 (immune system cancer)
1240 (leukemia)
8692 (myeloid leukemia)

FF: FANTOM5
0000102 (sample by type)
0000003 (cell line sample)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0100737 (leukemia cell line sample)
0101035 (hematopoietic cell line sample)
0101883 (acute myeloid leukemia cell line sample)
0100740 (myeloid leukemia cell line sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000049 (common myeloid progenitor)
CL:0000134 (mesenchymal cell)

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