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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000061,UBERON:0000465,UBERON:0000479,UBERON:0001062,UBERON:0002384
|DRA_sample_Accession=RNA-Seq@SAMD00013678
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000004,CL:0000012,CL:0000034,CL:0000037,CL:0000048,CL:0000051,CL:0000063,CL:0000084,CL:0000134,CL:0000144,CL:0000219,CL:0000255,CL:0000542,CL:0000548,CL:0000566,CL:0000625,CL:0000723,CL:0000738,CL:0000789,CL:0000790,CL:0000791,CL:0000827,CL:0000837,CL:0000838,CL:0000988,CL:0002031,CL:0002032,CL:0002087,CL:0002320,CL:0002371,CL:0002419,CL:0002420
|accession_numbers=CAGE;DRX008069;DRR008941;DRZ000366;DRZ001751;DRZ011716;DRZ013101!RNA-Seq;DRX012350;DRR013798;DRZ002999;
|ancestors_in_anatomy_facet=
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr5:133451294..133451310,+!p2@TCF7!2.03!104.94!TCF7;;chr2:68592406..68592424,+!p1@PLEK!1.98!93.70!PLEK;;chr3:27763807..27763822,-!p1@EOMES!1.93!84.95!EOMES;;chr17:45810594..45810608,+!p1@TBX21!1.89!76.21!TBX21;;chr2:192015701..192015743,-!p1@STAT4!1.87!99.94!STAT4;;chr7:50343634..50343717,+!p2@IKZF1!1.86!71.21!IKZF1;;chr3:63953435..63953499,+!p1@ATXN7!1.79!59.97!ATXN7;;chr2:192015750..192015793,-!p2@STAT4!1.69!63.71!STAT4;;chr9:117150254..117150271,-!p1@AKNA!1.68!123.68!AKNA;;chr2:231090433..231090469,+!p1@SP140!1.66!44.98!SP140;;chr4:109087445..109087463,-!p1@LEF1!1.65!43.73!LEF1;;chr5:133450365..133450444,+!p1@TCF7!1.60!169.91!TCF7;;chr17:37934365..37934387,-!p2@IKZF3!1.60!38.73!IKZF3;;chr2:68592394..68592405,+!p2@PLEK!1.56!34.98!PLEK;;chr7:50344251..50344288,+!p3@IKZF1!1.54!33.73!IKZF1;;chr1:26697243..26697258,-!p1@ZNF683!1.52!32.48!ZNF683;;chr1:25256756..25256774,-!p1@RUNX3!1.47!52.47!RUNX3;;chr14:75988771..75988826,+!p1@BATF!1.47!37.48!BATF;;chr20:50159198..50159299,-!p1@NFATC2!1.46!39.98!NFATC2;;chr3:18486354..18486377,-!p2@SATB1!1.45!33.73!SATB1;;chr19:16435625..16435682,+!p1@KLF2!1.44!820.79!KLF2;;chr3:71355163..71355209,-!p5@FOXP1!1.44!36.23!FOXP1;;chr17:38020392..38020477,-!p1@IKZF3!1.44!26.24!IKZF3;;chr20:56195474..56195506,-!p1@ZBP1!1.41!24.99!ZBP1;;chr3:71542615..71542644,-!p12@FOXP1!1.39!23.74!FOXP1;;chr4:109090075..109090095,-!p2@LEF1!1.39!23.74!LEF1;;chr5:133451347..133451358,+!p3@TCF7!1.39!23.74!TCF7;;chr7:50343895..50343936,+!p5@IKZF1!1.39!23.74!IKZF1;;chr17:37934204..37934241,-!p3@IKZF3!1.37!22.49!IKZF3;;chr2:231090471..231090504,+!p2@SP140!1.37!22.49!SP140;;chr3:71542684..71542720,-!p18@FOXP1!1.35!21.24!FOXP1;;chr11:47400078..47400106,-!p1@SPI1!1.35!21.24!SPI1;;chr15:60884706..60884743,-!p1@RORA!1.34!106.19!RORA;;chr6:106546808..106546833,+!p3@PRDM1!1.32!24.99!PRDM1;;chr11:128392273..128392308,-!p2@ETS1!1.27!73.71!ETS1;;chr6:91006518..91006570,-!p1@BACH2!1.27!39.98!BACH2;;chr17:38020557..38020572,-!p4@IKZF3!1.27!17.49!IKZF3;;chr19:19779619..19779670,+!p1@ZNF101!1.26!47.47!ZNF101;;chr4:57522166..57522260,-!p2@HOPX!1.24!18.74!HOPX;;chr11:128563948..128564003,+!p1@FLI1!1.21!178.65!FLI1;;chr6:391743..391759,+!p1@IRF4!1.20!14.99!IRF4;;chr3:71179699..71179744,-!p2@FOXP1!1.17!101.19!FOXP1;;chr13:41593425..41593480,-!p1@ELF1!1.17!86.20!ELF1;;chr10:8096772..8096787,+!p2@GATA3!1.17!16.24!GATA3;;chr17:38020481..38020506,-!p7@IKZF3!1.17!13.74!IKZF3;;chr7:50344289..50344323,+!p1@IKZF1!1.17!13.74!IKZF1;;chr8:60031619..60031676,-!p1@TOX!1.14!27.48!TOX;;chr3:71542651..71542683,-!p22@FOXP1!1.13!12.49!FOXP1;;chr1:26697189..26697205,-!p2@ZNF683!1.13!12.49!ZNF683;;chr11:128392085..128392232,-!p1@ETS1!1.11!398.53!ETS1;;chr16:88752889..88752921,-!p1@SNAI3!1.11!13.74!SNAI3;;chr14:99738138..99738163,-!p1@BCL11B!1.09!11.24!BCL11B;;chr20:52226313..52226350,-!p3@ZNF217!1.09!11.24!ZNF217;;chr21:36421347..36421380,-!p8@RUNX1!1.09!11.24!RUNX1;;chr4:109088089..109088101,-!p11@LEF1!1.09!11.24!LEF1;;chr7:50344144..50344157,+!p6@IKZF1!1.09!11.24!IKZF1;;chr9:3525727..3525828,-!p2@RFX3!1.08!28.73!RFX3;;chr9:117150303..117150312,-!p3@AKNA!1.07!13.74!AKNA;;chr21:36421535..36421610,-!p2@RUNX1!1.04!36.23!RUNX1;;chr4:185395633..185395651,-!p2@IRF2!1.04!16.24!IRF2;;chr13:74707894..74707947,-!p6@KLF12!1.04!11.24!KLF12;;chr1:92951607..92951661,-!p1@GFI1!1.04!9.99!GFI1;;chr17:37934280..37934299,-!p6@IKZF3!1.04!9.99!IKZF3;;chr6:106546731..106546755,+!p5@PRDM1!1.04!9.99!PRDM1;;chr6:106546786..106546802,+!p6@PRDM1!1.04!9.99!PRDM1;;chr6:45296048..45296082,+!p1@RUNX2!1.03!11.24!RUNX2;;chr14:64970670..64970712,-!p3@ZBTB25!1.00!19.99!ZBTB25;;chr8:72756023..72756055,-!p6@MSC!1.00!11.24!MSC;;chr12:54778471..54778528,-!p1@ZNF385A!0.99!8.75!ZNF385A;;chr16:85932760..85932775,+!p1@IRF8!0.99!8.75!IRF8;;chr4:109088940..109089037,-!p4@LEF1!0.99!8.75!LEF1;;chr4:109089901..109089930,-!p3@LEF1!0.99!8.75!LEF1;;chr19:19729477..19729542,-!p1@PBX4!0.98!18.74!PBX4;;chrX:106960285..106960299,-!p1@TSC22D3!0.96!226.12!TSC22D3;;chr10:8096631..8096660,+!p1@GATA3!0.96!9.99!GATA3;;chr16:68119324..68119364,+!p1@NFATC3!0.95!36.23!NFATC3;;chr16:89787937..89787971,+!p1@ZNF276!0.95!21.24!ZNF276;;chrX:101186981..101187030,-!p1@ZMAT1!0.94!26.24!ZMAT1;;chr2:178128250..178128293,-!p6@NFE2L2!0.94!19.99!NFE2L2;;chr16:79633894..79633954,-!p3@MAF!0.93!14.99!MAF;;chr17:46621311..46621332,-!p8@HOXB2!0.93!9.99!HOXB2;;chr14:75988831..75988847,+!p2@BATF!0.93!7.50!BATF;;chr2:192015677..192015691,-!p3@STAT4!0.93!7.50!STAT4;;chr2:231090344..231090361,-!p3@SP110!0.93!7.50!SP110;;chr4:57522598..57522664,-!p3@HOPX!0.93!7.50!HOPX;;chr21:36421147..36421193,-!p10@RUNX1!0.93!7.50!RUNX1;;chr19:20748574..20748599,-!p1@ZNF737!0.92!46.22!ZNF737;;chr19:53289995..53290050,-!p1@ZNF600!0.92!31.23!ZNF600;;chr19:38085768..38085821,+!p1@ZNF540!0.92!11.24!ZNF540;;chr6:45390300..45390335,+!p4@RUNX2!0.91!11.24!RUNX2;;chr14:69262947..69262986,-!p3@ZFP36L1!0.91!8.75!ZFP36L1;;chr9:114287433..114287513,+!p1@ZNF483!0.90!18.74!ZNF483;;chr19:40502938..40502987,+!p1@ZNF546!0.88!17.49!ZNF546;;chr6:45390269..45390298,+!p5@RUNX2!0.88!11.24!RUNX2;;chr8:67525443..67525459,-!p2@MYBL1!0.88!9.99!MYBL1;;chr4:81104895..81104920,+!p2@PRDM8!0.88!9.99!PRDM8;;chr2:148778973..148779035,+!p3@MBD5!0.87!17.49!MBD5;;chr20:51588873..51588953,+!p1@TSHZ2!0.87!8.75!TSHZ2;;chr4:38665769..38665801,+!p2@KLF3!0.86!59.97!KLF3;;chr13:74708029..74708077,-!p2@KLF12!0.86!18.74!KLF12;;chr9:32550839..32550962,-!p3@TOPORS!0.86!16.24!TOPORS;;chr6:42419649..42419673,-!p3@TRERF1!0.86!11.24!TRERF1;;chr6:91006503..91006517,-!p3@BACH2!0.86!6.25!BACH2;;chr7:137620650..137620677,-!p3@CREB3L2!0.86!6.25!CREB3L2;;chr9:20620829..20620848,-!p7@MLLT3!0.86!6.25!MLLT3;;chrX:49121165..49121179,-!p1@FOXP3!0.86!6.25!FOXP3;;chr16:89789248..89789270,+!p8@ZNF276!0.86!6.25!ZNF276;;chr16:89789271..89789291,+!p5@ZNF276!0.86!6.25!ZNF276;;chr17:38020516..38020544,-!p5@IKZF3!0.86!6.25!IKZF3;;chr17:38020607..38020621,-!p9@IKZF3!0.86!6.25!IKZF3;;chr17:56565257..56565283,-!p2@HSF5!0.86!6.25!HSF5;;chr1:25291475..25291511,-!p2@RUNX3!0.86!6.25!RUNX3;;chr20:56195525..56195556,-!p2@ZBP1!0.86!6.25!ZBP1;;chr2:97202991..97203043,+!p3@ARID5A!0.86!6.25!ARID5A;;chr3:18480217..18480239,-!p3@SATB1!0.86!6.25!SATB1;;chr4:149363494..149363543,-!p1@NR3C2!0.86!6.25!NR3C2;;chr4:149366111..149366128,-!p7@NR3C2!0.86!6.25!NR3C2;;chr11:13299319..13299424,+!p1@ARNTL!0.85!64.96!ARNTL;;chr19:12405606..12405629,-!p2@ZNF44!0.85!12.49!ZNF44;;chr19:58220517..58220583,-!p1@ZNF154!0.82!18.74!ZNF154;;chr19:52674696..52674758,-!p1@ZNF836!0.82!17.49!ZNF836;;chr1:45805693..45805718,+!p3@TOE1!0.81!12.49!TOE1;;chr7:77428066..77428132,+!p2@PHTF2!0.80!37.48!PHTF2;;chr15:60884747..60884774,-!p3@RORA!0.80!13.74!RORA;;chr19:19779686..19779697,+!p3@ZNF101!0.80!6.25!ZNF101;;chr6:135502501..135502546,+!p1@MYB!0.79!6.25!MYB;;chr4:140005443..140005527,-!p2@ELF2!0.78!32.48!ELF2;;chr7:64838786..64838809,+!p2@ZNF92!0.78!31.23!ZNF92;;chr3:114819124..114819200,-!p3@ZBTB20!0.78!12.49!ZBTB20;;chr2:214017168..214017189,-!p8@IKZF2!0.78!5.00!IKZF2;;chr3:18487057..18487105,-!p4@SATB1!0.78!5.00!SATB1;;chr3:71353892..71353928,-!p31@FOXP1!0.78!5.00!FOXP1;;chr4:109089290..109089320,-!p14@LEF1!0.78!5.00!LEF1;;chr4:57522674..57522699,-!p5@HOPX!0.78!5.00!HOPX;;chr1:61542922..61542955,+!p10@NFIA!0.78!5.00!NFIA;;chr10:8097591..8097627,+!p7@GATA3!0.78!5.00!GATA3;;chr11:47400032..47400043,-!p5@SPI1!0.78!5.00!SPI1;;chr5:176735063..176735088,-!p2@MXD3!0.78!5.00!MXD3;;chr7:50343864..50343888,+!p7@IKZF1!0.78!5.00!IKZF1;;chr8:67525467..67525472,-!p4@MYBL1!0.78!5.00!MYBL1;;chr19:21579908..21579949,+!p1@ZNF493!0.77!32.48!ZNF493;;chr7:21467674..21467727,+!p1@SP4!0.77!21.24!SP4;;chr20:44600496..44600541,-!p2@ZNF335!0.77!13.74!ZNF335;;chr5:131826457..131826514,-!p1@IRF1!0.76!206.14!IRF1;;chr14:65569101..65569119,-!p3@MAX!0.76!16.24!MAX;;chr14:64970494..64970578,-!p1@ZBTB25!0.75!51.22!ZBTB25;;chr16:79634624..79634642,-!p1@MAF!0.75!19.99!MAF;;chr17:38256973..38256990,-!p5@NR1D1!0.75!11.24!NR1D1;;chr7:86781734..86781777,+!p1@DMTF1!0.74!92.45!DMTF1;;chr2:145277640..145277771,-!p1@ZEB2!0.73!64.96!ZEB2;;chr13:41240737..41240787,-!p1@FOXO1!0.73!58.72!FOXO1;;chr19:49140609..49140643,-!p1@DBP!0.73!27.48!DBP;;chrX:131624056..131624069,-!p2@MBNL3!0.73!6.25!MBNL3;;chr9:2016724..2016752,+!p7@SMARCA2!0.72!8.75!SMARCA2;;chr19:11877805..11877832,+!p2@ZNF441!0.72!7.50!ZNF441;;chr10:104154246..104154347,+!p3@NFKB2!0.71!28.73!NFKB2;;chr19:19976634..19976677,+!p2@ZNF253!0.71!16.24!ZNF253;;chr2:97202451..97202462,+!p2@ARID5A!0.71!9.99!ARID5A;;chr19:19779589..19779616,+!p2@ZNF101!0.71!8.75!ZNF101;;chr9:20621927..20621996,-!p3@MLLT3!0.71!7.50!MLLT3;;chrX:131623982..131624011,-!p6@MBNL3!0.71!6.25!MBNL3;;chr3:18466660..18466676,-!p5@SATB1!0.71!5.00!SATB1;;chr9:99540335..99540388,-!p1@ZNF510!0.70!33.73!ZNF510;;chr3:18466787..18466839,-!p1@SATB1!0.70!19.99!SATB1;;chr19:19976683..19976709,+!p1@ZNF253!0.70!19.99!ZNF253;;chr19:12444440..12444455,-!p1@ZNF563!0.70!7.50!ZNF563;;chr2:231084659..231084721,-!p1@SP110!0.69!104.94!SP110;;chr15:31619326..31619390,+!p2@KLF13!0.69!51.22!KLF13;;chr7:64126503..64126528,+!p1@ZNF107!0.69!31.23!ZNF107;;chr19:19932513..19932569,-!p1@ZNF506!0.68!82.45!ZNF506;;chr2:174828545..174828644,-!p1@SP3!0.68!67.46!SP3;;chr14:90085458..90085557,-!p1@FOXN3!0.68!44.98!FOXN3;;chr11:128392309..128392350,-!p3@ETS1!0.68!9.99!ETS1;;chr19:44669280..44669294,+!p4@ZNF226,p4@ZNF234!0.68!6.25!ZNF226;;chr9:32550965..32551031,-!p4@TOPORS!0.68!6.25!TOPORS;;chr19:38183208..38183225,-!p1@ZNF781!0.68!5.00!ZNF781;;chr19:38183138..38183157,-!p2@ZNF781!0.68!3.75!ZNF781;;chr20:57757940..57757966,+!p@chr20:57757940..57757966,+!0.68!3.75!ZNF831;;chr21:34442439..34442455,+!p1@OLIG1!0.68!3.75!OLIG1;;chr6:106546834..106546850,+!p4@PRDM1!0.68!3.75!PRDM1;;chr7:137620684..137620711,-!p4@CREB3L2!0.68!3.75!CREB3L2;;chr8:60031563..60031574,-!p7@TOX!0.68!3.75!TOX;;chr17:37934392..37934398,-!p11@IKZF3!0.68!3.75!IKZF3;;chr17:41738684..41738704,-!p2@MEOX1!0.68!3.75!MEOX1;;chr17:45810816..45810838,+!p2@TBX21!0.68!3.75!TBX21;;chr2:100759037..100759058,-!p2@AFF3!0.68!3.75!A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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000084;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000542;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000625;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000738;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000789;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000988
|ffid_belonging_in_development=CL:0000134,CL:0000051,CL:0000790
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 42:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
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|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.LQhCAGE/CD8%252b%2520T%2520Cells%2520%2528pluriselect%2529%252c%2520donor090612%252c%2520donation1.CNhs12182.12201-129C5.hg38.nobarcode.ctss.bed.gz
|id=FF:12201-129C5
|id=FF:12201-129C5
|is_a=EFO:0002091;;FF:0000002;;FF:0000030;;FF:0000210
|is_a=EFO:0002091;;FF:0000030;;FF:0000210
|is_obsolete=
|library_id=CNhs12182!RDhi10017
|library_id_phase_based=2:CNhs12182
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;12201
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;12201
|name=CD8+ T Cells (pluriselect), donor090612, donation1
|name=CD8+ T Cells (pluriselect), donor090612, donation1
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 61:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs12182,LSID975,release011,COMPLETED
|profile_hcage=CNhs12182,LSID975,release011,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
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|rna_box=129
|rna_box=129
|rna_catalog_number=
|rna_catalog_number=
Line 56: Line 79:
|rna_weight_ug=2.246
|rna_weight_ug=2.246
|sample_age=
|sample_age=
|sample_category=primary cells
|sample_cell_catalog=
|sample_cell_catalog=
|sample_cell_line=
|sample_cell_line=
Line 68: Line 92:
|sample_ethnicity=
|sample_ethnicity=
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;6.8728093555318e-216!GO:0043227;membrane-bound organelle;6.6670355322725e-169!GO:0043231;intracellular membrane-bound organelle;1.46815465575149e-168!GO:0043226;organelle;9.17440691462497e-156!GO:0043229;intracellular organelle;4.20128179079532e-155!GO:0005737;cytoplasm;1.5922677798489e-127!GO:0044422;organelle part;3.98111969466092e-102!GO:0044446;intracellular organelle part;1.16061996503993e-100!GO:0044444;cytoplasmic part;2.15787859661227e-92!GO:0032991;macromolecular complex;1.47506220128706e-86!GO:0044237;cellular metabolic process;5.29897026885691e-86!GO:0043170;macromolecule metabolic process;1.01223729165601e-84!GO:0005634;nucleus;4.31376162174821e-82!GO:0044238;primary metabolic process;2.25739982988804e-80!GO:0030529;ribonucleoprotein complex;2.19010717546697e-78!GO:0003723;RNA binding;4.67420361445573e-74!GO:0044428;nuclear part;1.30826809258288e-68!GO:0043233;organelle lumen;3.4725227062664e-61!GO:0031974;membrane-enclosed lumen;3.4725227062664e-61!GO:0043283;biopolymer metabolic process;8.10313385001955e-54!GO:0005515;protein binding;2.08248701571487e-52!GO:0006396;RNA processing;1.69338207027059e-51!GO:0005739;mitochondrion;3.08854255381006e-51!GO:0006412;translation;1.03104111350241e-50!GO:0010467;gene expression;1.25353476661281e-50!GO:0019538;protein metabolic process;9.13026983655218e-48!GO:0044267;cellular protein metabolic process;1.20340270230105e-45!GO:0044260;cellular macromolecule metabolic process;2.85568600093875e-45!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.83999580825789e-44!GO:0005840;ribosome;1.01606450402696e-43!GO:0033036;macromolecule localization;1.72225008075356e-43!GO:0016071;mRNA metabolic process;3.80187541374809e-43!GO:0031981;nuclear lumen;5.87508970382872e-42!GO:0043234;protein complex;5.87508970382872e-42!GO:0015031;protein transport;3.75399350912815e-41!GO:0045184;establishment of protein localization;3.4612511479296e-40!GO:0008104;protein localization;1.1374002648216e-39!GO:0009059;macromolecule biosynthetic process;4.11101507296052e-39!GO:0003735;structural constituent of ribosome;6.65676355977919e-38!GO:0008380;RNA splicing;1.81738032609038e-37!GO:0044429;mitochondrial part;2.25283211396704e-37!GO:0006397;mRNA processing;2.67047480003878e-37!GO:0031090;organelle membrane;1.62501731242606e-36!GO:0031967;organelle envelope;1.10175362316527e-34!GO:0031975;envelope;2.24263633153811e-34!GO:0033279;ribosomal subunit;1.36761380546073e-33!GO:0005829;cytosol;2.72151480713343e-33!GO:0003676;nucleic acid binding;9.54082753631354e-31!GO:0044249;cellular biosynthetic process;2.32265769542197e-30!GO:0009058;biosynthetic process;4.12956533708689e-30!GO:0022613;ribonucleoprotein complex biogenesis and assembly;3.57190715755511e-29!GO:0046907;intracellular transport;5.98029653655709e-29!GO:0006886;intracellular protein transport;8.61360584216528e-29!GO:0005681;spliceosome;5.51182714633025e-28!GO:0005654;nucleoplasm;9.20814333469178e-27!GO:0005830;cytosolic ribosome (sensu Eukaryota);7.48662563797307e-26!GO:0065003;macromolecular complex assembly;9.8702777137393e-26!GO:0016043;cellular component organization and biogenesis;5.13799861974427e-25!GO:0016070;RNA metabolic process;5.16741092764623e-25!GO:0006259;DNA metabolic process;1.72152418708281e-24!GO:0044445;cytosolic part;1.08449902945473e-23!GO:0005740;mitochondrial envelope;5.16825174885429e-23!GO:0031966;mitochondrial membrane;1.02789510838941e-22!GO:0019866;organelle inner membrane;2.69693948084961e-22!GO:0000166;nucleotide binding;7.73084113995586e-22!GO:0022607;cellular component assembly;1.71972457349979e-21!GO:0051641;cellular localization;5.00155001440386e-21!GO:0005743;mitochondrial inner membrane;7.27554727123325e-21!GO:0051649;establishment of cellular localization;8.38704522392171e-21!GO:0044451;nucleoplasm part;9.55761365855856e-21!GO:0006512;ubiquitin cycle;3.22181563937208e-20!GO:0012501;programmed cell death;5.72206734335322e-20!GO:0006915;apoptosis;8.89943740495218e-20!GO:0008219;cell death;1.8974746459738e-19!GO:0016265;death;1.8974746459738e-19!GO:0006119;oxidative phosphorylation;1.96690985717557e-19!GO:0022618;protein-RNA complex assembly;2.4600569647694e-19!GO:0044265;cellular macromolecule catabolic process;4.19993512182524e-18!GO:0016874;ligase activity;1.16785382513119e-17!GO:0031980;mitochondrial lumen;1.28226697605705e-17!GO:0005759;mitochondrial matrix;1.28226697605705e-17!GO:0043412;biopolymer modification;2.05694261371844e-17!GO:0006996;organelle organization and biogenesis;2.07271882440109e-17!GO:0015934;large ribosomal subunit;2.75945105595496e-17!GO:0015935;small ribosomal subunit;3.00786688985392e-17!GO:0006605;protein targeting;4.94092110067975e-17!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;5.06533182581926e-17!GO:0016817;hydrolase activity, acting on acid anhydrides;6.3993592680877e-17!GO:0016462;pyrophosphatase activity;6.92580050760412e-17!GO:0017111;nucleoside-triphosphatase activity;8.95669519966266e-17!GO:0005730;nucleolus;1.69658300852801e-16!GO:0051603;proteolysis involved in cellular protein catabolic process;1.92133539363596e-16!GO:0019941;modification-dependent protein catabolic process;2.53139945669279e-16!GO:0043632;modification-dependent macromolecule catabolic process;2.53139945669279e-16!GO:0016604;nuclear body;2.70535629842293e-16!GO:0044257;cellular protein catabolic process;4.53121207597615e-16!GO:0006511;ubiquitin-dependent protein catabolic process;4.94308377608605e-16!GO:0043285;biopolymer catabolic process;5.54404922999356e-16!GO:0044455;mitochondrial membrane part;5.83359844823026e-16!GO:0032553;ribonucleotide binding;1.4184656657029e-15!GO:0032555;purine ribonucleotide binding;1.4184656657029e-15!GO:0006913;nucleocytoplasmic transport;2.16366610230236e-15!GO:0051169;nuclear transport;3.62230905482414e-15!GO:0008135;translation factor activity, nucleic acid binding;3.66749267727582e-15!GO:0017076;purine nucleotide binding;3.96532375634736e-15!GO:0006464;protein modification process;5.28293832994029e-15!GO:0006457;protein folding;7.51133088409057e-15!GO:0000502;proteasome complex (sensu Eukaryota);1.9194376205508e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;2.02130438231697e-14!GO:0000375;RNA splicing, via transesterification reactions;2.02130438231697e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;2.02130438231697e-14!GO:0009057;macromolecule catabolic process;3.78276309919443e-14!GO:0043228;non-membrane-bound organelle;3.78276309919443e-14!GO:0043232;intracellular non-membrane-bound organelle;3.78276309919443e-14!GO:0005746;mitochondrial respiratory chain;4.91905430230557e-14!GO:0006974;response to DNA damage stimulus;8.19413341768535e-14!GO:0016887;ATPase activity;8.67755272859962e-14!GO:0042981;regulation of apoptosis;1.0605388075326e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.16565422162125e-13!GO:0043067;regulation of programmed cell death;1.31400829115296e-13!GO:0012505;endomembrane system;1.45649938336793e-13!GO:0042623;ATPase activity, coupled;2.14298412816995e-13!GO:0008134;transcription factor binding;2.22780508254507e-13!GO:0005524;ATP binding;2.65575229632489e-13!GO:0016607;nuclear speck;2.81778102583873e-13!GO:0043687;post-translational protein modification;3.08008204196498e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);3.45560352022893e-13!GO:0050136;NADH dehydrogenase (quinone) activity;8.76872608843591e-13!GO:0003954;NADH dehydrogenase activity;8.76872608843591e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;8.76872608843591e-13!GO:0032559;adenyl ribonucleotide binding;8.89514060937663e-13!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.42583578561042e-12!GO:0005635;nuclear envelope;1.93487541701423e-12!GO:0030554;adenyl nucleotide binding;3.49917523731519e-12!GO:0006325;establishment and/or maintenance of chromatin architecture;3.69355886308197e-12!GO:0006413;translational initiation;9.21185943244365e-12!GO:0044248;cellular catabolic process;1.02833224617139e-11!GO:0030163;protein catabolic process;1.10394563626298e-11!GO:0006323;DNA packaging;1.41935661106874e-11!GO:0017038;protein import;1.66514333473161e-11!GO:0031965;nuclear membrane;1.72677781350051e-11!GO:0003743;translation initiation factor activity;1.98054756889247e-11!GO:0042775;organelle ATP synthesis coupled electron transport;2.13020958840114e-11!GO:0042773;ATP synthesis coupled electron transport;2.13020958840114e-11!GO:0005761;mitochondrial ribosome;2.13020958840114e-11!GO:0000313;organellar ribosome;2.13020958840114e-11!GO:0048770;pigment granule;2.74051165748875e-11!GO:0042470;melanosome;2.74051165748875e-11!GO:0006281;DNA repair;2.84042734624494e-11!GO:0050794;regulation of cellular process;3.08204685501904e-11!GO:0051276;chromosome organization and biogenesis;3.15469293879947e-11!GO:0006446;regulation of translational initiation;5.34257572344702e-11!GO:0030964;NADH dehydrogenase complex (quinone);5.85519785864624e-11!GO:0045271;respiratory chain complex I;5.85519785864624e-11!GO:0005747;mitochondrial respiratory chain complex I;5.85519785864624e-11!GO:0042254;ribosome biogenesis and assembly;1.24455829632395e-10!GO:0008639;small protein conjugating enzyme activity;1.37556133845238e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.40966702926665e-10!GO:0051082;unfolded protein binding;1.8282933817173e-10!GO:0004386;helicase activity;2.42439616134243e-10!GO:0004842;ubiquitin-protein ligase activity;3.22060255153389e-10!GO:0051186;cofactor metabolic process;4.64707394049783e-10!GO:0048193;Golgi vesicle transport;5.18950250066743e-10!GO:0005794;Golgi apparatus;1.2362070418252e-09!GO:0007049;cell cycle;1.71824449177365e-09!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.36654101285708e-09!GO:0019787;small conjugating protein ligase activity;2.41188637637215e-09!GO:0016568;chromatin modification;2.5371776817078e-09!GO:0008026;ATP-dependent helicase activity;2.63944654055605e-09!GO:0044453;nuclear membrane part;2.64213658596443e-09!GO:0019829;cation-transporting ATPase activity;3.1427177410162e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.68090738570299e-09!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;3.71724820138008e-09!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;5.55398618870587e-09!GO:0050657;nucleic acid transport;7.4247994848077e-09!GO:0051236;establishment of RNA localization;7.4247994848077e-09!GO:0050658;RNA transport;7.4247994848077e-09!GO:0006403;RNA localization;8.40290869772924e-09!GO:0016192;vesicle-mediated transport;1.07983644725869e-08!GO:0043566;structure-specific DNA binding;1.16983556324405e-08!GO:0003712;transcription cofactor activity;1.21330986364536e-08!GO:0009719;response to endogenous stimulus;1.46166810661801e-08!GO:0009259;ribonucleotide metabolic process;1.54495520114982e-08!GO:0005643;nuclear pore;1.98963512239676e-08!GO:0005839;proteasome core complex (sensu Eukaryota);2.52879066267049e-08!GO:0007243;protein kinase cascade;2.69221054807835e-08!GO:0006793;phosphorus metabolic process;2.75488014810058e-08!GO:0006796;phosphate metabolic process;2.75488014810058e-08!GO:0006399;tRNA metabolic process;2.99398676235277e-08!GO:0019222;regulation of metabolic process;3.51551064166728e-08!GO:0051170;nuclear import;3.75362322324872e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;4.52798554544826e-08!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;4.74310023124019e-08!GO:0006606;protein import into nucleus;5.78235061228137e-08!GO:0016787;hydrolase activity;5.83403364856707e-08!GO:0005768;endosome;6.07987339632249e-08!GO:0015078;hydrogen ion transmembrane transporter activity;6.81351262572535e-08!GO:0009260;ribonucleotide biosynthetic process;7.97276524025104e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;8.02491068495033e-08!GO:0030532;small nuclear ribonucleoprotein complex;8.53825777954196e-08!GO:0051246;regulation of protein metabolic process;1.02381652751401e-07!GO:0006732;coenzyme metabolic process;1.02990568626586e-07!GO:0009150;purine ribonucleotide metabolic process;1.19426105070816e-07!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;1.25606406503995e-07!GO:0006163;purine nucleotide metabolic process;1.40205938303813e-07!GO:0009152;purine ribonucleotide biosynthetic process;1.66787903519496e-07!GO:0016881;acid-amino acid ligase activity;1.70853557042079e-07!GO:0016072;rRNA metabolic process;1.70853557042079e-07!GO:0015986;ATP synthesis coupled proton transport;1.70853557042079e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.70853557042079e-07!GO:0004298;threonine endopeptidase activity;1.71186133278635e-07!GO:0006364;rRNA processing;1.88262288263801e-07!GO:0005694;chromosome;1.88262288263801e-07!GO:0051028;mRNA transport;1.92545665706895e-07!GO:0006164;purine nucleotide biosynthetic process;2.09398539650469e-07!GO:0006333;chromatin assembly or disassembly;2.11351485157199e-07!GO:0003697;single-stranded DNA binding;2.27455324977663e-07!GO:0050789;regulation of biological process;2.32050934836367e-07!GO:0051726;regulation of cell cycle;2.3370686895949e-07!GO:0016310;phosphorylation;2.98666789184648e-07!GO:0005783;endoplasmic reticulum;3.1020344610263e-07!GO:0000074;regulation of progression through cell cycle;3.11359903670177e-07!GO:0065002;intracellular protein transport across a membrane;3.1317677898173e-07!GO:0022402;cell cycle process;3.36919535338593e-07!GO:0000245;spliceosome assembly;3.66635302732865e-07!GO:0008565;protein transporter activity;3.7947116818665e-07!GO:0006916;anti-apoptosis;5.08457609883054e-07!GO:0046930;pore complex;5.38826466710089e-07!GO:0016469;proton-transporting two-sector ATPase complex;6.18299345993041e-07!GO:0044432;endoplasmic reticulum part;7.45361200635484e-07!GO:0048523;negative regulation of cellular process;8.00672642960748e-07!GO:0009060;aerobic respiration;8.43399725726924e-07!GO:0009615;response to virus;9.71963439410144e-07!GO:0044427;chromosomal part;9.81409663262841e-07!GO:0000151;ubiquitin ligase complex;1.04130323079427e-06!GO:0006754;ATP biosynthetic process;1.04130323079427e-06!GO:0006753;nucleoside phosphate metabolic process;1.04130323079427e-06!GO:0046034;ATP metabolic process;1.04381401344504e-06!GO:0003713;transcription coactivator activity;1.05655352403663e-06!GO:0031323;regulation of cellular metabolic process;1.12326035500355e-06!GO:0009199;ribonucleoside triphosphate metabolic process;1.14855781283948e-06!GO:0043069;negative regulation of programmed cell death;1.23005173182851e-06!GO:0065004;protein-DNA complex assembly;1.25400699043472e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.49455707889754e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.49455707889754e-06!GO:0065009;regulation of a molecular function;1.55340935101625e-06!GO:0043065;positive regulation of apoptosis;1.60126417452833e-06!GO:0009141;nucleoside triphosphate metabolic process;1.61513335616128e-06!GO:0032446;protein modification by small protein conjugation;1.69940678665309e-06!GO:0009142;nucleoside triphosphate biosynthetic process;1.69940678665309e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;1.69940678665309e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;2.01525257438771e-06!GO:0006917;induction of apoptosis;2.12670181031833e-06!GO:0043066;negative regulation of apoptosis;2.12670181031833e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;2.19156781284481e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;2.19156781284481e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.23900828682924e-06!GO:0004812;aminoacyl-tRNA ligase activity;2.23900828682924e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.23900828682924e-06!GO:0043068;positive regulation of programmed cell death;2.35655221502811e-06!GO:0003724;RNA helicase activity;2.45505938655256e-06!GO:0000785;chromatin;2.85891162763682e-06!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.87266781833642e-06!GO:0012502;induction of programmed cell death;3.23256015688478e-06!GO:0016567;protein ubiquitination;3.49061571818534e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;4.08474128713014e-06!GO:0006417;regulation of translation;4.24322975261991e-06!GO:0045333;cellular respiration;4.45219111065383e-06!GO:0009056;catabolic process;4.4680957102868e-06!GO:0009055;electron carrier activity;4.47187226251698e-06!GO:0051168;nuclear export;4.83188478473492e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;5.02384219088489e-06!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.0503472013206e-06!GO:0015399;primary active transmembrane transporter activity;5.0503472013206e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;5.3221482979686e-06!GO:0030120;vesicle coat;5.3221482979686e-06!GO:0030662;coated vesicle membrane;5.3221482979686e-06!GO:0006461;protein complex assembly;5.71418521365452e-06!GO:0043038;amino acid activation;6.07785353700691e-06!GO:0006418;tRNA aminoacylation for protein translation;6.07785353700691e-06!GO:0043039;tRNA aminoacylation;6.07785353700691e-06!GO:0045259;proton-transporting ATP synthase complex;6.10644201928669e-06!GO:0005773;vacuole;6.89229670355998e-06!GO:0016740;transferase activity;7.52924322536621e-06!GO:0048475;coated membrane;7.87289280731421e-06!GO:0030117;membrane coat;7.87289280731421e-06!GO:0005789;endoplasmic reticulum membrane;8.37185986385657e-06!GO:0005770;late endosome;9.92379341363766e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.04320316549907e-05!GO:0006401;RNA catabolic process;1.14293423247519e-05!GO:0016563;transcription activator activity;1.16607594413298e-05!GO:0051188;cofactor biosynthetic process;1.35330589576053e-05!GO:0031326;regulation of cellular biosynthetic process;1.46776523983436e-05!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.53651531492081e-05!GO:0006613;cotranslational protein targeting to membrane;1.65924723798086e-05!GO:0043492;ATPase activity, coupled to movement of substances;1.85419616786556e-05!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;2.01934786514573e-05!GO:0016779;nucleotidyltransferase activity;2.03771453947711e-05!GO:0006260;DNA replication;2.09331495917533e-05!GO:0006366;transcription from RNA polymerase II promoter;2.14628277777429e-05!GO:0048519;negative regulation of biological process;2.20061323932586e-05!GO:0007242;intracellular signaling cascade;2.28370195322895e-05!GO:0005813;centrosome;2.31026662643157e-05!GO:0005793;ER-Golgi intermediate compartment;2.47439430921022e-05!GO:0006350;transcription;2.47703236707269e-05!GO:0045786;negative regulation of progression through cell cycle;2.55316507217087e-05!GO:0019899;enzyme binding;2.56577995195399e-05!GO:0008632;apoptotic program;2.66295803591202e-05!GO:0007005;mitochondrion organization and biogenesis;2.66295803591202e-05!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;2.71385541321954e-05!GO:0000323;lytic vacuole;2.95095693616325e-05!GO:0005764;lysosome;2.95095693616325e-05!GO:0010468;regulation of gene expression;3.60038643834803e-05!GO:0001772;immunological synapse;3.63317462837941e-05!GO:0016772;transferase activity, transferring phosphorus-containing groups;4.26104708499513e-05!GO:0008186;RNA-dependent ATPase activity;5.01209232355301e-05!GO:0006099;tricarboxylic acid cycle;5.17035026058925e-05!GO:0046356;acetyl-CoA catabolic process;5.17035026058925e-05!GO:0006084;acetyl-CoA metabolic process;6.24607587654354e-05!GO:0002376;immune system process;6.87048468064426e-05!GO:0005815;microtubule organizing center;8.17511686284347e-05!GO:0065007;biological regulation;8.32151501735289e-05!GO:0009889;regulation of biosynthetic process;8.36936266812058e-05!GO:0031324;negative regulation of cellular metabolic process;8.88675507350837e-05!GO:0016564;transcription repressor activity;9.80652099692982e-05!GO:0044431;Golgi apparatus part;9.81888374653447e-05!GO:0003690;double-stranded DNA binding;0.000101509935752496!GO:0042101;T cell receptor complex;0.000122916997613659!GO:0009108;coenzyme biosynthetic process;0.000123052924612572!GO:0044440;endosomal part;0.000123337581513689!GO:0010008;endosome membrane;0.000123337581513689!GO:0008270;zinc ion binding;0.000124294597355182!GO:0043623;cellular protein complex assembly;0.000124864890022142!GO:0043021;ribonucleoprotein binding;0.000139786669386438!GO:0006402;mRNA catabolic process;0.000139949300607743!GO:0006334;nucleosome assembly;0.000153030759037408!GO:0042110;T cell activation;0.000156458019717877!GO:0004004;ATP-dependent RNA helicase activity;0.00016454019324864!GO:0005525;GTP binding;0.000184261984123767!GO:0006612;protein targeting to membrane;0.000208941246166638!GO:0009117;nucleotide metabolic process;0.000225102046635631!GO:0005885;Arp2/3 protein complex;0.000227102442897427!GO:0005762;mitochondrial large ribosomal subunit;0.000228582033492268!GO:0000315;organellar large ribosomal subunit;0.000228582033492268!GO:0031497;chromatin assembly;0.000245423362390017!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000247978152236639!GO:0008234;cysteine-type peptidase activity;0.000248141169537625!GO:0051187;cofactor catabolic process;0.000265760178418944!GO:0009109;coenzyme catabolic process;0.0002781348824736!GO:0048522;positive regulation of cellular process;0.00027877314068833!GO:0006752;group transfer coenzyme metabolic process;0.000295168808355976!GO:0003729;mRNA binding;0.000349468741548146!GO:0009967;positive regulation of signal transduction;0.000360078326091757!GO:0016363;nuclear matrix;0.000368018358403044!GO:0000278;mitotic cell cycle;0.000410699729540623!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000436846351145202!GO:0060090;molecular adaptor activity;0.000447334623073539!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.000454236680981136!GO:0031252;leading edge;0.000478153400533149!GO:0015992;proton transport;0.000513221539920171!GO:0008654;phospholipid biosynthetic process;0.000518421588502638!GO:0006818;hydrogen transport;0.000536028025519832!GO:0003899;DNA-directed RNA polymerase activity;0.00060931160706282!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000708791782494123!GO:0009892;negative regulation of metabolic process;0.000728072635689327!GO:0046489;phosphoinositide biosynthetic process;0.000737365796277292!GO:0006310;DNA recombination;0.000741699450500663!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000761551241198869!GO:0003725;double-stranded RNA binding;0.000773610591110286!GO:0046649;lymphocyte activation;0.000827538704735466!GO:0043681;protein import into mitochondrion;0.000828015828711307!GO:0030384;phosphoinositide metabolic process;0.000906349551295338!GO:0045321;leukocyte activation;0.000921017988801111!GO:0016481;negative regulation of transcription;0.00105541617327569!GO:0050790;regulation of catalytic activity;0.00109892843634422!GO:0006950;response to stress;0.00111423393946163!GO:0022415;viral reproductive process;0.00112689076367473!GO:0005774;vacuolar membrane;0.00124133038007724!GO:0022890;inorganic cation transmembrane transporter activity;0.00124393095026014!GO:0046914;transition metal ion binding;0.0013026681064755!GO:0005798;Golgi-associated vesicle;0.00133804849312006!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00136333028858893!GO:0000139;Golgi membrane;0.00144140365514912!GO:0006607;NLS-bearing substrate import into nucleus;0.0014670565051114!GO:0006611;protein export from nucleus;0.0014873756503565!GO:0006891;intra-Golgi vesicle-mediated transport;0.00151400726299652!GO:0046474;glycerophospholipid biosynthetic process;0.00155765762342943!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0015968104008614!GO:0051252;regulation of RNA metabolic process;0.00167513361886502!GO:0032561;guanyl ribonucleotide binding;0.00168223716754993!GO:0019001;guanyl nucleotide binding;0.00168223716754993!GO:0048518;positive regulation of biological process;0.00172736261617364!GO:0031968;organelle outer membrane;0.00174175062896834!GO:0005741;mitochondrial outer membrane;0.00179677265466487!GO:0032774;RNA biosynthetic process;0.00181900177864891!GO:0006261;DNA-dependent DNA replication;0.00194589905423911!GO:0008033;tRNA processing;0.00200276166480808!GO:0005667;transcription factor complex;0.00200344728131793!GO:0031072;heat shock protein binding;0.00200344728131793!GO:0006351;transcription, DNA-dependent;0.00213610933967414!GO:0000314;organellar small ribosomal subunit;0.00223927760952939!GO:0005763;mitochondrial small ribosomal subunit;0.00223927760952939!GO:0008047;enzyme activator activity;0.00228940345067955!GO:0019867;outer membrane;0.00230069581668004!GO:0045449;regulation of transcription;0.00236332184670434!GO:0051427;hormone receptor binding;0.0025248496982993!GO:0004518;nuclease activity;0.00259650588231955!GO:0031902;late endosome membrane;0.00266314691914995!GO:0044437;vacuolar part;0.002704606386535!GO:0002757;immune response-activating signal transduction;0.00278544150970625!GO:0016251;general RNA polymerase II transcription factor activity;0.00301700390122157!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00311522106880027!GO:0030658;transport vesicle membrane;0.00312052116890621!GO:0007034;vacuolar transport;0.00325078168100173!GO:0005769;early endosome;0.00325078168100173!GO:0003924;GTPase activity;0.00327966529858755!GO:0004527;exonuclease activity;0.00330061762993513!GO:0048471;perinuclear region of cytoplasm;0.00333874609596095!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00347201566704388!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00347201566704388!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00347201566704388!GO:0008168;methyltransferase activity;0.00362703054198184!GO:0032259;methylation;0.00369618693722138!GO:0048500;signal recognition particle;0.0037374745292049!GO:0002429;immune response-activating cell surface receptor signaling pathway;0.00376657833049877!GO:0005070;SH3/SH2 adaptor activity;0.00381999995829336!GO:0006383;transcription from RNA polymerase III promoter;0.00385103425102095!GO:0006955;immune response;0.00388919038589303!GO:0006289;nucleotide-excision repair;0.00394106292939523!GO:0004674;protein serine/threonine kinase activity;0.00395121127448095!GO:0042287;MHC protein binding;0.00395798164725364!GO:0005765;lysosomal membrane;0.00429685507940202!GO:0035257;nuclear hormone receptor binding;0.00450592639314062!GO:0051090;regulation of transcription factor activity;0.00451467399292485!GO:0031625;ubiquitin protein ligase binding;0.00453274420575491!GO:0006650;glycerophospholipid metabolic process;0.00453299044514253!GO:0043488;regulation of mRNA stability;0.00453299044514253!GO:0043487;regulation of RNA stability;0.00453299044514253!GO:0016741;transferase activity, transferring one-carbon groups;0.00455076964851536!GO:0006405;RNA export from nucleus;0.00513013620071281!GO:0002764;immune response-regulating signal transduction;0.00517007529402406!GO:0007006;mitochondrial membrane organization and biogenesis;0.00531624682781775!GO:0003678;DNA helicase activity;0.00537512998776705!GO:0051251;positive regulation of lymphocyte activation;0.00537512998776705!GO:0042802;identical protein binding;0.00554071390646181!GO:0051098;regulation of binding;0.00556411638039686!GO:0051092;activation of NF-kappaB transcription factor;0.00572396899615996!GO:0007265;Ras protein signal transduction;0.00590873972077199!GO:0016584;nucleosome positioning;0.00590902784447366!GO:0005684;U2-dependent spliceosome;0.00598122906019836!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00604724162868105!GO:0008624;induction of apoptosis by extracellular signals;0.00605604130736605!GO:0007264;small GTPase mediated signal transduction;0.00623329953648992!GO:0003714;transcription corepressor activity;0.00658116581151503!GO:0043414;biopolymer methylation;0.00670461187668357!GO:0003684;damaged DNA binding;0.00685390003613774!GO:0016197;endosome transport;0.00689389398087537!GO:0030695;GTPase regulator activity;0.00689389398087537!GO:0003746;translation elongation factor activity;0.00690245754970927!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.00690245754970927!GO:0015002;heme-copper terminal oxidase activity;0.00690245754970927!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.00690245754970927!GO:0004129;cytochrome-c oxidase activity;0.00690245754970927!GO:0015631;tubulin binding;0.0069469185189618!GO:0030660;Golgi-associated vesicle membrane;0.00705251338460811!GO:0002768;immune response-regulating cell surface receptor signaling pathway;0.00705251338460811!GO:0009165;nucleotide biosynthetic process;0.00731765697072679!GO:0046822;regulation of nucleocytoplasmic transport;0.00731765697072679!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00734720873599396!GO:0045047;protein targeting to ER;0.00734720873599396!GO:0030118;clathrin coat;0.00744184885758634!GO:0006497;protein amino acid lipidation;0.00746971359517388!GO:0051789;response to protein stimulus;0.00751676215700674!GO:0006986;response to unfolded protein;0.00751676215700674!GO:0051087;chaperone binding;0.00751676215700674!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00764800110765006!GO:0006414;translational elongation;0.00775725794355678!GO:0032940;secretion by cell;0.00780935301430758!GO:0000049;tRNA binding;0.00783106581830568!GO:0016859;cis-trans isomerase activity;0.00786764240832219!GO:0051920;peroxiredoxin activity;0.00790125865045624!GO:0006506;GPI anchor biosynthetic process;0.00791144161679709!GO:0008312;7S RNA binding;0.00841584903520639!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00858302631723358!GO:0003711;transcription elongation regulator activity;0.00898806075563736!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00918081522380484!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00918081522380484!GO:0051336;regulation of hydrolase activity;0.00941655715192995!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00970869679934242!GO:0000786;nucleosome;0.010297039216094!GO:0006352;transcription initiation;0.010297039216094!GO:0004197;cysteine-type endopeptidase activity;0.0106969475261753!GO:0044452;nucleolar part;0.010713223676444!GO:0000087;M phase of mitotic cell cycle;0.0107394320317427!GO:0000209;protein polyubiquitination;0.010991743253376!GO:0016853;isomerase activity;0.0111086596306279!GO:0006505;GPI anchor metabolic process;0.0111086596306279!GO:0008097;5S rRNA binding;0.0113145680875482!GO:0019079;viral genome replication;0.0114323190706144!GO:0001775;cell activation;0.0114938752035573!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0116524465346099!GO:0006376;mRNA splice site selection;0.0119535868773482!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0119535868773482!GO:0048468;cell development;0.011985723621269!GO:0047485;protein N-terminus binding;0.0120854972741615!GO:0001819;positive regulation of cytokine production;0.0130665714240032!GO:0046467;membrane lipid biosynthetic process;0.0133713747505073!GO:0009116;nucleoside metabolic process;0.0135147189735517!GO:0048487;beta-tubulin binding;0.013872259213422!GO:0005669;transcription factor TFIID complex;0.0140110791081997!GO:0019783;small conjugating protein-specific protease activity;0.0151224773699938!GO:0046966;thyroid hormone receptor binding;0.015656866831359!GO:0019058;viral infectious cycle;0.0157153574593533!GO:0030137;COPI-coated vesicle;0.0160243807536061!GO:0007041;lysosomal transport;0.0161336355782617!GO:0051539;4 iron, 4 sulfur cluster binding;0.016310432799781!GO:0007067;mitosis;0.0163653104524137!GO:0030663;COPI coated vesicle membrane;0.0164316973869828!GO:0030126;COPI vesicle coat;0.0164316973869828!GO:0050865;regulation of cell activation;0.0164459018362445!GO:0004843;ubiquitin-specific protease activity;0.0165282593310679!GO:0015980;energy derivation by oxidation of organic compounds;0.0165476649760343!GO:0000287;magnesium ion binding;0.0168512100910304!GO:0051249;regulation of lymphocyte activation;0.0170144421578851!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.0172493006991785!GO:0018193;peptidyl-amino acid modification;0.0172699140159118!GO:0005521;lamin binding;0.0174376939902548!GO:0022403;cell cycle phase;0.0174612524603751!GO:0043022;ribosome binding;0.0175731765016818!GO:0006839;mitochondrial transport;0.0178005773873675!GO:0005657;replication fork;0.017853812267804!GO:0031124;mRNA 3'-end processing;0.0179050079020325!GO:0051301;cell division;0.0179050079020325!GO:0050863;regulation of T cell activation;0.0179050079020325!GO:0006355;regulation of transcription, DNA-dependent;0.0181856842764572!GO:0006626;protein targeting to mitochondrion;0.0183645447508948!GO:0008408;3'-5' exonuclease activity;0.0185940402030545!GO:0005048;signal sequence binding;0.0187379913697199!GO:0005869;dynactin complex;0.0188659407183993!GO:0045045;secretory pathway;0.0193890688548717!GO:0030258;lipid modification;0.0194134611685401!GO:0007050;cell cycle arrest;0.0195957269876568!GO:0042158;lipoprotein biosynthetic process;0.0197710637721368!GO:0051223;regulation of protein transport;0.0198863784683999!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.020174559136867!GO:0044438;microbody part;0.020174559136867!GO:0044439;peroxisomal part;0.020174559136867!GO:0051540;metal cluster binding;0.0204650459319876!GO:0051536;iron-sulfur cluster binding;0.0204650459319876!GO:0050811;GABA receptor binding;0.0211305286376939!GO:0031982;vesicle;0.021335807609521!GO:0015630;microtubule cytoskeleton;0.0213913111836589!GO:0004532;exoribonuclease activity;0.0220094937729675!GO:0016896;exoribonuclease activity, producing 5'-phosphomonoesters;0.0220094937729675!GO:0050852;T cell receptor signaling pathway;0.0222153333439551!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0224080192308782!GO:0008017;microtubule binding;0.022485646461516!GO:0050851;antigen receptor-mediated signaling pathway;0.0229361237555941!GO:0006284;base-excision repair;0.023799840826624!GO:0031461;cullin-RING ubiquitin ligase complex;0.0238892500011425!GO:0030125;clathrin vesicle coat;0.0241498705448881!GO:0030665;clathrin coated vesicle membrane;0.0241498705448881!GO:0016272;prefoldin complex;0.0241718950363438!GO:0019843;rRNA binding;0.0243020459883291!GO:0005777;peroxisome;0.0244658264452639!GO:0042579;microbody;0.0244658264452639!GO:0043621;protein self-association;0.0247655965743239!GO:0031123;RNA 3'-end processing;0.0250780923022474!GO:0050870;positive regulation of T cell activation;0.0251060506214658!GO:0009607;response to biotic stimulus;0.0255666897289508!GO:0016585;chromatin remodeling complex;0.0258038246088434!GO:0006914;autophagy;0.0258882460284082!GO:0005096;GTPase activator activity;0.0260605598640986!GO:0005083;small GTPase regulator activity;0.026855227221917!GO:0004221;ubiquitin thiolesterase activity;0.026855227221917!GO:0001726;ruffle;0.0268583141274561!GO:0033116;ER-Golgi intermediate compartment membrane;0.0278976461675212!GO:0045892;negative regulation of transcription, DNA-dependent;0.0290104731214437!GO:0005637;nuclear inner membrane;0.0291381192996619!GO:0031988;membrane-bound vesicle;0.0291413877600207!GO:0006338;chromatin remodeling;0.0296150508884207!GO:0030127;COPII vesicle coat;0.0298089959980039!GO:0012507;ER to Golgi transport vesicle membrane;0.0298089959980039!GO:0008139;nuclear localization sequence binding;0.0304195461740841!GO:0000118;histone deacetylase complex;0.0316313440129081!GO:0031903;microbody membrane;0.0318956524473234!GO:0005778;peroxisomal membrane;0.0318956524473234!GO:0000738;DNA catabolic process, exonucleolytic;0.0318956524473234!GO:0032200;telomere organization and biogenesis;0.0318956524473234!GO:0000723;telomere maintenance;0.0318956524473234!GO:0009112;nucleobase metabolic process;0.0321048109097064!GO:0042608;T cell receptor binding;0.0321822284184962!GO:0030867;rough endoplasmic reticulum membrane;0.0321822284184962!GO:0016605;PML body;0.0326688512558712!GO:0043087;regulation of GTPase activity;0.0331356139531859!GO:0006367;transcription initiation from RNA polymerase II promoter;0.0331356139531859!GO:0022411;cellular component disassembly;0.0331394966404363!GO:0003682;chromatin binding;0.0332655162311061!GO:0006904;vesicle docking during exocytosis;0.0334393380887454!GO:0001784;phosphotyrosine binding;0.0335541622949183!GO:0006919;caspase activation;0.0337979660022301!GO:0022406;membrane docking;0.034052627537931!GO:0048278;vesicle docking;0.034052627537931!GO:0000303;response to superoxide;0.034530290944035!GO:0051091;positive regulation of transcription factor activity;0.0349572186678027!GO:0043281;regulation of caspase activity;0.0349572186678027!GO:0008287;protein serine/threonine phosphatase complex;0.035126034053703!GO:0019883;antigen processing and presentation of endogenous antigen;0.0351955540884493!GO:0006302;double-strand break repair;0.0353143487874182!GO:0000059;protein import into nucleus, docking;0.03533868569722!GO:0048002;antigen processing and presentation of peptide antigen;0.0358319965068567!GO:0030119;AP-type membrane coat adaptor complex;0.0358759083043117!GO:0009966;regulation of signal transduction;0.0371933054027044!GO:0003677;DNA binding;0.0374215493728435!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0388741911190476!GO:0045069;regulation of viral genome replication;0.0388741911190476!GO:0000090;mitotic anaphase;0.0389548324022669!GO:0051322;anaphase;0.0389548324022669!GO:0017134;fibroblast growth factor binding;0.0392599666498658!GO:0002440;production of molecular mediator of immune response;0.0392599666498658!GO:0008637;apoptotic mitochondrial changes;0.0392843533024963!GO:0015036;disulfide oxidoreductase activity;0.0393369196255451!GO:0006091;generation of precursor metabolites and energy;0.0396110462842173!GO:0032981;mitochondrial respiratory chain complex I assembly;0.0396822734589043!GO:0010257;NADH dehydrogenase complex assembly;0.0396822734589043!GO:0033108;mitochondrial respiratory chain complex assembly;0.0396822734589043!GO:0002378;immunoglobulin biosynthetic process;0.0402148201704145!GO:0001911;negative regulation of leukocyte mediated cytotoxicity;0.0402148201704145!GO:0001915;negative regulation of T cell mediated cytotoxicity;0.0402148201704145!GO:0005832;chaperonin-containing T-complex;0.0406945326260742!GO:0004576;oligosaccharyl transferase activity;0.0411034894265503!GO:0030131;clathrin adaptor complex;0.0415496634916035!GO:0004722;protein serine/threonine phosphatase activity;0.0416188713847122!GO:0015923;mannosidase activity;0.0417934413022548!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0417934413022548!GO:0008250;oligosaccharyl transferase complex;0.0423727064897367!GO:0016505;apoptotic protease activator activity;0.0427100582780961!GO:0051052;regulation of DNA metabolic process;0.0429620544362228!GO:0046983;protein dimerization activity;0.0431285524953208!GO:0016791;phosphoric monoester hydrolase activity;0.0438057129574118!GO:0016044;membrane organization and biogenesis;0.0452761906132158!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0454126892788553!GO:0040029;regulation of gene expression, epigenetic;0.0460164210496513!GO:0050857;positive regulation of antigen receptor-mediated signaling pathway;0.0461183891271073!GO:0006013;mannose metabolic process;0.0466032401082744!GO:0045058;T cell selection;0.0469153179475593!GO:0000339;RNA cap binding;0.0469153179475593!GO:0045309;protein phosphorylated amino acid binding;0.0469153179475593!GO:0006356;regulation of transcription from RNA polymerase I promoter;0.0471889226748095!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0474259723087436!GO:0045454;cell redox homeostasis;0.0482133137317996!GO:0031410;cytoplasmic vesicle;0.0482317241698607!GO:0030176;integral to endoplasmic reticulum membrane;0.0487335782930443!GO:0016311;dephosphorylation;0.0487682724228275!GO:0002483;antigen processing and presentation of endogenous peptide antigen;0.0493561830045436!GO:0019885;antigen processing and presentation of endogenous peptide antigen via MHC class I;0.0493561830045436!GO:0043280;positive regulation of caspase activity;0.0494440131767455!GO:0045603;positive regulation of endothelial cell differentiation;0.049700964381411!GO:0004177;aminopeptidase activity;0.0498208681118324
|sample_id=12201
|sample_id=12201
|sample_note=
|sample_note=
Line 75: Line 100:
|sample_tissue=blood
|sample_tissue=blood
|top_motifs=T:3.07914668181;PDX1:2.28471045781;RUNX1..3:2.22083230066;ELF1,2,4:2.1668742045;ETS1,2:2.06108640306;PAX3,7:1.7416891684;FOX{D1,D2}:1.55144217663;SPI1:1.52022903124;NFIX:1.45505331268;RORA:1.45426751461;CRX:1.39811326496;FOXO1,3,4:1.39777776514;CDX1,2,4:1.35879442314;DMAP1_NCOR{1,2}_SMARC:1.35493372406;IRF1,2:1.28389890854;SPIB:1.22075081672;STAT1,3:1.20387386493;FOX{F1,F2,J1}:1.20011753784;GATA6:1.1503194746;LEF1_TCF7_TCF7L1,2:1.11064224979;BPTF:1.10682743318;TLX2:1.04239118226;PBX1:1.02036079442;HMX1:0.978893556167;TGIF1:0.950451015163;FOXD3:0.93947161944;SPZ1:0.924262085126;IRF7:0.847682536545;RBPJ:0.847195656491;POU1F1:0.833444168785;IKZF2:0.806035912766;NKX2-1,4:0.766478538886;RFX2..5_RFXANK_RFXAP:0.748344765726;PAX6:0.741158415467;RXRA_VDR{dimer}:0.735330048922;NKX6-1,2:0.722006634715;BREu{core}:0.692227356658;MYOD1:0.650060619528;FOXQ1:0.627045560353;ELK1,4_GABP{A,B1}:0.615675162433;FOXN1:0.592270980685;VSX1,2:0.579889181828;YY1:0.553762267858;NFIL3:0.503188260514;NFATC1..3:0.460578801419;ZEB1:0.452412870541;ZBTB16:0.439313982122;ATF5_CREB3:0.396003042475;ADNP_IRX_SIX_ZHX:0.39446739086;SOX5:0.392012686826;FOXA2:0.37759904783;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.373598076363;TBX4,5:0.318308052773;NFKB1_REL_RELA:0.314355343481;NKX2-2,8:0.301075377096;SNAI1..3:0.292474271515;CUX2:0.272387371076;PRRX1,2:0.271424039919;PAX4:0.25582232842;NR1H4:0.248535777123;CEBPA,B_DDIT3:0.221345600462;HES1:0.191055037852;NANOG{mouse}:0.166488734549;PAX2:0.165911422981;FOXP3:0.165332300994;FOX{I1,J2}:0.162338925562;ALX1:0.162104744455;POU5F1:0.15788646019;TAL1_TCF{3,4,12}:0.122369886735;STAT2,4,6:0.113991039475;SOX2:0.103188929664;CREB1:0.0852625586102;LMO2:0.0509632862859;OCT4_SOX2{dimer}:0.0362956179025;AHR_ARNT_ARNT2:0.0308755454602;SREBF1,2:0.0040461758473;ARID5B:0.00135231065989;MYB:-0.0193576424345;ATF2:-0.0209590372004;STAT5{A,B}:-0.0338614889445;NR3C1:-0.0510722992528;FOXP1:-0.0733995604976;MYFfamily:-0.145959289279;NKX2-3_NKX2-5:-0.180042941289;NR5A1,2:-0.190217362724;NANOG:-0.191365027353;HAND1,2:-0.195481372432;SMAD1..7,9:-0.199687961304;EP300:-0.203077118737;HNF4A_NR2F1,2:-0.207236382236;POU2F1..3:-0.210522478279;NRF1:-0.220109284579;PITX1..3:-0.227060015954;HOX{A6,A7,B6,B7}:-0.245586751648;HNF1A:-0.250290616476;ZNF238:-0.250470245323;FOSL2:-0.254187235521;E2F1..5:-0.268404123571;ZNF143:-0.273656882781;ZNF148:-0.28253422647;AR:-0.290415375657;GLI1..3:-0.293208193973;JUN:-0.298395942003;DBP:-0.302347296036;ATF6:-0.318785061463;HLF:-0.329703431321;MTF1:-0.333231399871;NFE2L1:-0.35648280863;GCM1,2:-0.357107656261;ATF4:-0.370251631833;GATA4:-0.378179042179;BACH2:-0.378762932964;MAFB:-0.383028569622;NKX3-1:-0.388138250374;HBP1_HMGB_SSRP1_UBTF:-0.405361503657;ESR1:-0.405901000715;NHLH1,2:-0.435745021565;TFAP4:-0.441333015454;HMGA1,2:-0.466409290433;FOS_FOS{B,L1}_JUN{B,D}:-0.468121966207;NFE2L2:-0.475394147896;GFI1:-0.501590483917;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.521885450681;RFX1:-0.547749317051;SRF:-0.548876825863;NFY{A,B,C}:-0.549042462665;NFE2:-0.550705534725;RREB1:-0.570033347265;ZNF384:-0.611882509358;PAX8:-0.618440268493;TP53:-0.646786362441;MZF1:-0.648834545966;CDC5L:-0.667776574742;AIRE:-0.69130593759;FOXM1:-0.711038771767;MEF2{A,B,C,D}:-0.712200190613;ALX4:-0.728701771532;SOX{8,9,10}:-0.741829076582;REST:-0.747139746921;EN1,2:-0.798631972524;TFCP2:-0.823939544727;HOX{A5,B5}:-0.826753024992;KLF4:-0.846593925363;EBF1:-0.877236734824;LHX3,4:-0.897507493159;ZNF423:-0.901827728325;PRDM1:-0.9128483188;ZBTB6:-0.91755638621;EVI1:-0.926091972398;PAX5:-0.941498364198;HIF1A:-0.949380481646;GFI1B:-0.957512160805;ZFP161:-0.958694373519;EGR1..3:-0.979495858545;MTE{core}:-0.98260245819;MED-1{core}:-0.997416033221;PPARG:-1.03927520546;ONECUT1,2:-1.04995243991;NKX3-2:-1.11445051696;XBP1:-1.12147611008;NR6A1:-1.13182127989;MAZ:-1.13237807482;PATZ1:-1.13891468403;HOX{A4,D4}:-1.14538897784;TLX1..3_NFIC{dimer}:-1.15052367054;HIC1:-1.20401080846;HSF1,2:-1.20650793301;GTF2I:-1.22917040339;TBP:-1.25282547436;FOXL1:-1.26411405364;TOPORS:-1.26706594834;SOX17:-1.26820995039;HOXA9_MEIS1:-1.28879535753;TEF:-1.35417147788;MYBL2:-1.36319773552;GZF1:-1.36978356935;POU6F1:-1.3951193024;ZIC1..3:-1.39840212091;TFAP2B:-1.41501417202;RXR{A,B,G}:-1.41657887095;UFEwm:-1.42819716992;GTF2A1,2:-1.45884318189;bHLH_family:-1.59272839041;TFDP1:-1.60191019792;XCPE1{core}:-1.61911374772;POU3F1..4:-1.62133123343;TEAD1:-1.73919240384;SP1:-1.80790813062;ESRRA:-1.96028045974;TFAP2{A,C}:-2.23555771947;IKZF1:-2.42812314463;PAX1,9:-2.70890168701
|top_motifs=T:3.07914668181;PDX1:2.28471045781;RUNX1..3:2.22083230066;ELF1,2,4:2.1668742045;ETS1,2:2.06108640306;PAX3,7:1.7416891684;FOX{D1,D2}:1.55144217663;SPI1:1.52022903124;NFIX:1.45505331268;RORA:1.45426751461;CRX:1.39811326496;FOXO1,3,4:1.39777776514;CDX1,2,4:1.35879442314;DMAP1_NCOR{1,2}_SMARC:1.35493372406;IRF1,2:1.28389890854;SPIB:1.22075081672;STAT1,3:1.20387386493;FOX{F1,F2,J1}:1.20011753784;GATA6:1.1503194746;LEF1_TCF7_TCF7L1,2:1.11064224979;BPTF:1.10682743318;TLX2:1.04239118226;PBX1:1.02036079442;HMX1:0.978893556167;TGIF1:0.950451015163;FOXD3:0.93947161944;SPZ1:0.924262085126;IRF7:0.847682536545;RBPJ:0.847195656491;POU1F1:0.833444168785;IKZF2:0.806035912766;NKX2-1,4:0.766478538886;RFX2..5_RFXANK_RFXAP:0.748344765726;PAX6:0.741158415467;RXRA_VDR{dimer}:0.735330048922;NKX6-1,2:0.722006634715;BREu{core}:0.692227356658;MYOD1:0.650060619528;FOXQ1:0.627045560353;ELK1,4_GABP{A,B1}:0.615675162433;FOXN1:0.592270980685;VSX1,2:0.579889181828;YY1:0.553762267858;NFIL3:0.503188260514;NFATC1..3:0.460578801419;ZEB1:0.452412870541;ZBTB16:0.439313982122;ATF5_CREB3:0.396003042475;ADNP_IRX_SIX_ZHX:0.39446739086;SOX5:0.392012686826;FOXA2:0.37759904783;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.373598076363;TBX4,5:0.318308052773;NFKB1_REL_RELA:0.314355343481;NKX2-2,8:0.301075377096;SNAI1..3:0.292474271515;CUX2:0.272387371076;PRRX1,2:0.271424039919;PAX4:0.25582232842;NR1H4:0.248535777123;CEBPA,B_DDIT3:0.221345600462;HES1:0.191055037852;NANOG{mouse}:0.166488734549;PAX2:0.165911422981;FOXP3:0.165332300994;FOX{I1,J2}:0.162338925562;ALX1:0.162104744455;POU5F1:0.15788646019;TAL1_TCF{3,4,12}:0.122369886735;STAT2,4,6:0.113991039475;SOX2:0.103188929664;CREB1:0.0852625586102;LMO2:0.0509632862859;OCT4_SOX2{dimer}:0.0362956179025;AHR_ARNT_ARNT2:0.0308755454602;SREBF1,2:0.0040461758473;ARID5B:0.00135231065989;MYB:-0.0193576424345;ATF2:-0.0209590372004;STAT5{A,B}:-0.0338614889445;NR3C1:-0.0510722992528;FOXP1:-0.0733995604976;MYFfamily:-0.145959289279;NKX2-3_NKX2-5:-0.180042941289;NR5A1,2:-0.190217362724;NANOG:-0.191365027353;HAND1,2:-0.195481372432;SMAD1..7,9:-0.199687961304;EP300:-0.203077118737;HNF4A_NR2F1,2:-0.207236382236;POU2F1..3:-0.210522478279;NRF1:-0.220109284579;PITX1..3:-0.227060015954;HOX{A6,A7,B6,B7}:-0.245586751648;HNF1A:-0.250290616476;ZNF238:-0.250470245323;FOSL2:-0.254187235521;E2F1..5:-0.268404123571;ZNF143:-0.273656882781;ZNF148:-0.28253422647;AR:-0.290415375657;GLI1..3:-0.293208193973;JUN:-0.298395942003;DBP:-0.302347296036;ATF6:-0.318785061463;HLF:-0.329703431321;MTF1:-0.333231399871;NFE2L1:-0.35648280863;GCM1,2:-0.357107656261;ATF4:-0.370251631833;GATA4:-0.378179042179;BACH2:-0.378762932964;MAFB:-0.383028569622;NKX3-1:-0.388138250374;HBP1_HMGB_SSRP1_UBTF:-0.405361503657;ESR1:-0.405901000715;NHLH1,2:-0.435745021565;TFAP4:-0.441333015454;HMGA1,2:-0.466409290433;FOS_FOS{B,L1}_JUN{B,D}:-0.468121966207;NFE2L2:-0.475394147896;GFI1:-0.501590483917;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.521885450681;RFX1:-0.547749317051;SRF:-0.548876825863;NFY{A,B,C}:-0.549042462665;NFE2:-0.550705534725;RREB1:-0.570033347265;ZNF384:-0.611882509358;PAX8:-0.618440268493;TP53:-0.646786362441;MZF1:-0.648834545966;CDC5L:-0.667776574742;AIRE:-0.69130593759;FOXM1:-0.711038771767;MEF2{A,B,C,D}:-0.712200190613;ALX4:-0.728701771532;SOX{8,9,10}:-0.741829076582;REST:-0.747139746921;EN1,2:-0.798631972524;TFCP2:-0.823939544727;HOX{A5,B5}:-0.826753024992;KLF4:-0.846593925363;EBF1:-0.877236734824;LHX3,4:-0.897507493159;ZNF423:-0.901827728325;PRDM1:-0.9128483188;ZBTB6:-0.91755638621;EVI1:-0.926091972398;PAX5:-0.941498364198;HIF1A:-0.949380481646;GFI1B:-0.957512160805;ZFP161:-0.958694373519;EGR1..3:-0.979495858545;MTE{core}:-0.98260245819;MED-1{core}:-0.997416033221;PPARG:-1.03927520546;ONECUT1,2:-1.04995243991;NKX3-2:-1.11445051696;XBP1:-1.12147611008;NR6A1:-1.13182127989;MAZ:-1.13237807482;PATZ1:-1.13891468403;HOX{A4,D4}:-1.14538897784;TLX1..3_NFIC{dimer}:-1.15052367054;HIC1:-1.20401080846;HSF1,2:-1.20650793301;GTF2I:-1.22917040339;TBP:-1.25282547436;FOXL1:-1.26411405364;TOPORS:-1.26706594834;SOX17:-1.26820995039;HOXA9_MEIS1:-1.28879535753;TEF:-1.35417147788;MYBL2:-1.36319773552;GZF1:-1.36978356935;POU6F1:-1.3951193024;ZIC1..3:-1.39840212091;TFAP2B:-1.41501417202;RXR{A,B,G}:-1.41657887095;UFEwm:-1.42819716992;GTF2A1,2:-1.45884318189;bHLH_family:-1.59272839041;TFDP1:-1.60191019792;XCPE1{core}:-1.61911374772;POU3F1..4:-1.62133123343;TEAD1:-1.73919240384;SP1:-1.80790813062;ESRRA:-1.96028045974;TFAP2{A,C}:-2.23555771947;IKZF1:-2.42812314463;PAX1,9:-2.70890168701
|xref=
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:12201-129C5;search_select_hide=table117:FF:12201-129C5
}}
}}

Latest revision as of 18:34, 4 June 2020

Name:CD8+ T Cells (pluriselect), donor090612, donation1
Species:Human (Homo sapiens)
Library ID:CNhs12182,RDhi10017
Sample type:primary cells
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6
CAGEd-oPOSSUM:link
ZENBU report :link
Additional information
Sample information
strainNA
tissueblood
dev stageNA
sexNA
ageNA
cell typeT cell, CD8+
cell lineNA
companyNA
collaborationMatched_genome_OSC(contact:Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typeNA
extraction protocol (Details)NA

CAGE Accession numbers
MethodSample accession id
RNA-Seq  SAMD00013678
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs12182 CAGE DRX008069 DRR008941
RDhi10017 RNA-Seq DRX012350 DRR013798
Accession ID Hg19

Library idBAMCTSS
CNhs12182 DRZ000366 DRZ001751
RDhi10017 DRZ002999
Accession ID Hg38

Library idBAMCTSS
CNhs12182 DRZ011716 DRZ013101
RDhi10017
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis-0.168
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.256
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0.408
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.356
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0.86
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle-0.515
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed-0.256
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.405
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0.544
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.551
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80.352
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0.544
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.518
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0.256
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0.352
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0.079
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0.352
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0.352
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural1.01
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0.86
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12182

Jaspar motifP-value
MA0002.23.12275e-10
MA0003.10.377
MA0004.10.988
MA0006.10.578
MA0007.10.997
MA0009.10.249
MA0014.10.644
MA0017.10.0259
MA0018.20.356
MA0019.10.866
MA0024.10.122
MA0025.10.689
MA0027.10.723
MA0028.10.0234
MA0029.10.987
MA0030.10.366
MA0031.10.0281
MA0035.20.107
MA0038.10.116
MA0039.20.836
MA0040.10.677
MA0041.10.607
MA0042.10.553
MA0043.10.251
MA0046.10.94
MA0047.20.0679
MA0048.10.248
MA0050.11.85035e-6
MA0051.10.00414
MA0052.10.00741
MA0055.10.318
MA0057.10.796
MA0058.10.906
MA0059.10.321
MA0060.10.0214
MA0061.10.00389
MA0062.21.44118e-9
MA0065.20.0178
MA0066.10.0934
MA0067.10.87
MA0068.10.825
MA0069.10.66
MA0070.10.396
MA0071.10.481
MA0072.10.324
MA0073.10.866
MA0074.10.714
MA0076.10.00205
MA0077.10.168
MA0078.10.809
MA0079.20.272
MA0080.21.99224e-14
MA0081.10.00848
MA0083.10.15
MA0084.10.802
MA0087.10.926
MA0088.10.0739
MA0090.10.00423
MA0091.10.655
MA0092.10.569
MA0093.10.879
MA0099.20.785
MA0100.10.732
MA0101.10.524
MA0102.20.559
MA0103.10.129
MA0104.20.212
MA0105.17.30713e-7
MA0106.10.788
MA0107.10.477
MA0108.27.05723e-9
MA0111.10.245
MA0112.20.0307
MA0113.10.56
MA0114.10.118
MA0115.10.941
MA0116.18.39917e-6
MA0117.10.731
MA0119.10.54
MA0122.10.268
MA0124.10.741
MA0125.10.309
MA0131.10.789
MA0135.10.612
MA0136.17.66885e-23
MA0137.20.05
MA0138.20.84
MA0139.10.0209
MA0140.10.03
MA0141.10.566
MA0142.10.9
MA0143.10.626
MA0144.10.132
MA0145.10.633
MA0146.10.338
MA0147.10.193
MA0148.10.164
MA0149.10.2
MA0150.10.807
MA0152.10.077
MA0153.10.807
MA0154.10.00107
MA0155.10.975
MA0156.13.53298e-19
MA0157.10.0146
MA0159.10.0687
MA0160.10.307
MA0162.10.66
MA0163.13.46983e-14
MA0164.10.531
MA0258.10.0561
MA0259.10.504



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs12182

Novel motifP-value
10.17
100.03
1000.917
1010.247
1020.88
1030.271
1040.385
1050.0699
1060.32
1070.876
1080.84
1090.102
110.0629
1100.411
1110.225
1120.148
1130.147
1140.0899
1150.136
1160.982
1170.0206
1180.436
1190.297
120.942
1200.311
1210.783
1220.371
1230.082
1240.0648
1250.984
1260.16
1270.3
1280.342
1290.469
130.638
1300.853
1310.614
1320.932
1330.681
1340.757
1350.125
1360.611
1370.0957
1380.3
1390.00591
140.333
1400.0961
1410.625
1420.804
1432.42703e-5
1440.826
1450.318
1460.0996
1470.0659
1480.0535
1490.54
150.0508
1500.646
1510.203
1520.626
1530.884
1540.894
1550.0777
1560.528
1570.593
1580.186
1590.223
160.575
1600.458
1610.34
1620.394
1630.824
1640.476
1650.201
1660.689
1670.326
1680.112
1690.353
170.483
180.395
190.915
20.492
200.547
210.345
220.743
230.521
240.471
250.0736
260.384
270.0492
280.549
290.212
30.0498
300.719
310.746
320.252
330.421
340.727
350.0561
360.0137
370.213
380.525
390.772
40.766
400.466
410.113
420.0674
430.176
440.527
450.911
460.0667
470.108
480.162
490.0972
50.113
500.691
510.515
520.637
530.159
540.449
550.167
560.543
570.454
580.0353
590.247
60.773
600.244
610.177
620.0125
630.497
640.192
650.473
660.924
670.897
680.81
690.784
70.146
700.0144
710.0621
720.129
730.68
740.241
750.0493
760.432
770.98
780.17
790.351
80.525
800.00737
810.282
820.0483
830.732
840.408
850.634
860.28
870.938
880.88
890.864
90.321
900.0278
910.621
920.121
930.153
940.0488
950.0468
960.0841
970.463
980.177
990.323



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs12182


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)

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