FF:11504-119G1: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005176 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008299;DRR009171;DRZ000596;DRZ001981;DRZ011946;DRZ013331 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0001003,UBERON:0002097,UBERON:0002199,UBERON:0002073,UBERON:0000483,UBERON:0000479,UBERON:0004121,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000119,UBERON:0003102,UBERON:0007376,UBERON:0010371,UBERON:0010317,UBERON:0005933,UBERON:0005942,UBERON:0002416,UBERON:0005932 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0000076,CL:0000362,CL:0002159,CL:0000255,CL:0002077,CL:0002559,CL:0002561 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000072,FF:0000001,FF:0000075 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Outer%2520Root%2520Sheath%2520Cells%252c%2520donor1.CNhs12339.11504-119G1.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Outer%2520Root%2520Sheath%2520Cells%252c%2520donor1.CNhs12339.11504-119G1.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Outer%2520Root%2520Sheath%2520Cells%252c%2520donor1.CNhs12339.11504-119G1.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Outer%2520Root%2520Sheath%2520Cells%252c%2520donor1.CNhs12339.11504-119G1.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Hair%2520Follicle%2520Outer%2520Root%2520Sheath%2520Cells%252c%2520donor1.CNhs12339.11504-119G1.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11504-119G1 | |id=FF:11504-119G1 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000075 | ||
|is_obsolete= | |||
|library_id=CNhs12339 | |||
|library_id_phase_based=2:CNhs12339 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11504 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11504 | |||
|name=Hair Follicle Outer Root Sheath Cells, donor1 | |name=Hair Follicle Outer Root Sheath Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 61: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs12339,LSID913,release011,COMPLETED | |profile_hcage=CNhs12339,LSID913,release011,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=,,, | |profile_srnaseq=,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0,0.12495472419887,0,0.181148641533999,0.259792164324404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424881408906743,0,0.437563953783601,0,0,0,-0.0979578962680575,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.24670073409724,0,0,0,0,0,0,0,0,-0.0242150211128343,0,0,0,0.578204419255171,0,0,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0242194806122822,0,0,0,-0.163801289490164,0.077904806931717,0,0.37896153349969,0,0.165650208579294,0.0676148573415875,0.198261042149255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502190614320855,0,0,0,0.174060861057261,0.20011337236608,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,0.0676148573415875,0,0.165650208579294,0,0,0,0,0,0,0.37896153349969,0,0,0.0380938789996918,0.18009202567127,-0.474086218752008,-0.143515142523472,0,0,0.254774315221229,0,0,0,0,0,0,0,0,0,0.0375303416267292,0,0.115237656989979,0,0,0.165650208579294,0,-0.0186252810838506,0.0734893026012826,0,0.288652811489267,0.387637678662721,0,0,0,0,0.179929429071847,0,-0.120879483793741,0.296241365176273,0,0.0689996539013135,-0.04680465889238,0,0,0.082825104289647,0.12207219123783,0.0660125364098032,0,0,0.0208565253907542,0.162164817385314,0,0,-0.0120830480519448,0,0.183019366184965,0.25594979186311,0,0.120675857569419,0,0,0,0,0,0,0,0,0,0.082825104289647,0,0.885099043602802,0.194390066633684,0.116624274646726,0,0,0,0.0590503421257829,0,0,0.340985863289969,0.186349963255229,-0.124885639268404,-0.638922426361544,0,-0.302389727009913,0.128682327258624,-0.416041331056361,-0.163801289490164,0.430802569884032,0.627743267615287,0.00951720949028934,-0.136647526769761,-0.0720006098674759,-0.105992326938271,0.0441759984181638,-0.0302447930437535,0.0704693802101688,-0.172508979270123,0,0,0.0393628827104303,-0.091667301337129,0,0,0.224157304769762,-0.0861733893603095,0.272698373179747,0.070539486906634,-0.0766734344639345,-0.113685705081087,-0.0395325284566706,0.294125872748263,-0.0104494015326513,0.310104166747491,0,0,-0.105720000241546,-0.0204116927301761,-0.0343497814624645,-0.236864639678989,0,0.333747525354153,-0.0683442610773682,0,-0.0497624693315365,-0.180269719111847,0,0,-0.199815697371722,0,0,-0.00469845753147202,0.00692281336191375,0.285272754285256,-0.200713240848006,0.174779876216369,0.146105971944145,0,0.0338791047786471,0,-0.154649703209958,0,-0.215496939132766,0.0831019926744507,-0.0434675278235553,-0.0347057802972921,0,-0.112339841280157,0.334816338959225,0.141999765963945,0.155809613863434,-0.0584468268118252,-0.274489994035641,-0.329419118250636,0.188503487883778,0.649902540263462,-0.00759956673261164,0.0775233761040062,0,0.147933457388958,-0.394225377336268,-0.00259996519559003,0.0627083150212818,0.114974183972703,0.267173929053431,0,-0.158254602036528,0,-0.20648964476657,-0.0844518117331504,-0.439289374580686,-0.139515828544388,0,-0.0930273524471982,-0.409169404274284,0.000393924960504499,-0.00932001782908465,0,0,0.134905670950617,-0.0242194806122822,0.0138110535676858,0.171826617480497,0,0.222223718821579,0,0,-0.138236444042477,0.143485495735301,0,0.0108163404802329,-0.153220974473307,0.024231693070065,-0.115971073434934,0,0,0.0685716812538111,0,0.817724987165134,-0.440277855238736,0,-0.619783323958633,0.0319464127985005,0,0.176649944831,0,0,0.107744988320081,0,0.0957314580477447,0,0,0.0224245744406683,-0.116628112990133,0,0,0,0,0,0.00906730838148906,0,0,0,0,0,0.0528611038993354,-0.354833330216448,0,-0.0333758527479016,0,0,0,0,0,0,0,0.165650208579294,0.640560270499646,-0.0405793422855208,0.0426327929028736,0,0,0,0,0.457753083346826,-0.0375863535154299,0.165650208579294,0.0337875020816622,0,0,0,0,-0.0861409897892114,0,0,0,0,0.10791975152563,0.315608243004255,0,0,0,0.39652208429851,0,0,0.37896153349969,0.00117604629255419,-0.0425274067640982,0,0,0.717559585543176,0,0.122668822592302,-0.0815818795468414,0,-0.063751990012242,0.753239750815327,-1.14397013206917,0,0.165650208579294,-0.0956969232105936,0,0,-0.086834755946659,0,0,0,0,0,0,0,0,0,0.0709582418855006,0.082825104289647,0,0,0,0,0,0,0,0,0,0,0.141690310759425,0.0734261519207835,0.151815310860709,0,0,0,0,0,0,-0.0241060230789031,-0.0905232553672981,0,0,0,0,0,0,0,0,0.202050546237058,0,0,0,0,0,-0.0969923612426051,0,0,0,0,0.519584328648808,0,0,0.101599401306176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332662853704642,0.451753577657388,0,0,0,0,0,0,0,0.181148641533999,0,0,0,0,-0.113884373708977,0,0,0,-0.104796384789156,0,0.12495472419887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341720304693389,0,0.243595889505705,-0.0690924702167568,0,0,0.081595514499638,0,0,0,0,0,0,0.05148468026112,0.0057342226163585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0214571768047322,0,0,0,0,0,0,0,-0.0979578962680575,0,0,-0.0092077055108792,0,0,0,0,0,0,-0.145340463514082,0.429299005949432,-0.0782895821108945,0,0,0,0.088250804660173,0.578204419255171,0,0,0,0.51142703183627,0,0,0,0,0,0,0,0,0.165650208579294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424881408906743,0,0,0,0,0,0,0,0,0,0,0,0,0.189480766749845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165650208579294,-0.0340113632754165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165650208579294,-0.0800184682686384,0,0,0,0.779157500238372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308843152296141,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0482220752390542,0,0.371605307510063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.384853833936418,0,0,0,0,0.118013097918375,0,0,0,0,0,0,0,0,0,0,0.165650208579294,0,0,0,0,0,0,0,0,0,0,-0.0879603997092112,0,0,0.24670073409724,0,0,0,0,0,0,0,0,0,0,0,0,-0.0613201791501264,0,0,0,0,0,0,0,0,0,0,-0.0484300422256687,0,0,0,0,0,0,0,0,0.45598193974009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| |||
|rna_box=119 | |rna_box=119 | ||
|rna_catalog_number=SC2425 | |rna_catalog_number=SC2425 | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|sample_age= | |sample_age= | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;5.24853357918973e-206!GO:0005737;cytoplasm;3.32338102252114e-177!GO:0043231;intracellular membrane-bound organelle;6.9022681487883e-163!GO:0043227;membrane-bound organelle;1.20887701596484e-162!GO:0043226;organelle;6.26293407713213e-161!GO:0043229;intracellular organelle;1.39184069790068e-160!GO:0044444;cytoplasmic part;1.80781105638487e-137!GO:0044422;organelle part;1.19573986599222e-110!GO:0044446;intracellular organelle part;2.70275771240636e-109!GO:0044237;cellular metabolic process;6.47279244204333e-81!GO:0044238;primary metabolic process;4.23083465152908e-79!GO:0030529;ribonucleoprotein complex;8.03431302083292e-79!GO:0032991;macromolecular complex;5.1790188684148e-76!GO:0043170;macromolecule metabolic process;2.00249397981705e-71!GO:0005515;protein binding;2.10983934706551e-66!GO:0005739;mitochondrion;1.49123631516352e-65!GO:0043233;organelle lumen;3.94641421506818e-63!GO:0031974;membrane-enclosed lumen;3.94641421506818e-63!GO:0003723;RNA binding;9.14648916700985e-61!GO:0044428;nuclear part;1.47376833597077e-55!GO:0005634;nucleus;2.03547362429327e-51!GO:0031090;organelle membrane;5.62972488756917e-51!GO:0005840;ribosome;9.65091103238458e-51!GO:0006412;translation;6.42513101306853e-49!GO:0019538;protein metabolic process;3.56612242144548e-48!GO:0003735;structural constituent of ribosome;8.49627004408401e-45!GO:0044429;mitochondrial part;3.60981685936839e-44!GO:0044260;cellular macromolecule metabolic process;4.29286825037927e-43!GO:0009058;biosynthetic process;6.8672256048825e-43!GO:0044267;cellular protein metabolic process;3.29991219320594e-42!GO:0015031;protein transport;2.33843607804617e-40!GO:0006396;RNA processing;3.79447289204959e-40!GO:0009059;macromolecule biosynthetic process;6.04435572546164e-40!GO:0005829;cytosol;9.69701394566963e-40!GO:0033036;macromolecule localization;1.32353154762237e-39!GO:0044249;cellular biosynthetic process;1.61612232976333e-39!GO:0010467;gene expression;2.24460499535166e-39!GO:0033279;ribosomal subunit;3.30235983262832e-39!GO:0008104;protein localization;4.98183719750102e-37!GO:0045184;establishment of protein localization;7.99571946592176e-37!GO:0031967;organelle envelope;2.63203610231479e-36!GO:0031975;envelope;5.95562541456571e-36!GO:0031981;nuclear lumen;6.74179042231802e-36!GO:0043234;protein complex;5.09137245368844e-35!GO:0016043;cellular component organization and biogenesis;1.79215212680676e-34!GO:0016071;mRNA metabolic process;7.16911747263741e-34!GO:0043283;biopolymer metabolic process;9.97370630099844e-34!GO:0008380;RNA splicing;2.29466290045642e-30!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;6.61602229709738e-30!GO:0005830;cytosolic ribosome (sensu Eukaryota);9.57140554704236e-30!GO:0046907;intracellular transport;9.80110690796281e-30!GO:0006397;mRNA processing;3.92101628692214e-29!GO:0005740;mitochondrial envelope;3.94413849826963e-29!GO:0031966;mitochondrial membrane;1.14003356400347e-27!GO:0006886;intracellular protein transport;2.8566110721999e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.37944398399246e-25!GO:0019866;organelle inner membrane;1.51268900318413e-25!GO:0005743;mitochondrial inner membrane;7.73609343851142e-25!GO:0065003;macromolecular complex assembly;1.02991191766698e-24!GO:0005654;nucleoplasm;1.15418484876151e-22!GO:0044445;cytosolic part;1.26599960382688e-22!GO:0006119;oxidative phosphorylation;1.69246041295419e-21!GO:0005783;endoplasmic reticulum;1.89527192482321e-21!GO:0005681;spliceosome;2.33297389407244e-21!GO:0022607;cellular component assembly;3.35200351151521e-21!GO:0015934;large ribosomal subunit;3.29477597696033e-20!GO:0012505;endomembrane system;5.39233749034467e-20!GO:0015935;small ribosomal subunit;5.96942120797683e-20!GO:0044455;mitochondrial membrane part;4.18854966458707e-19!GO:0044451;nucleoplasm part;4.93988165150177e-19!GO:0006457;protein folding;8.94367783997677e-19!GO:0031980;mitochondrial lumen;2.6575840105284e-18!GO:0005759;mitochondrial matrix;2.6575840105284e-18!GO:0005794;Golgi apparatus;2.83996362626246e-18!GO:0048770;pigment granule;7.13147056499774e-18!GO:0042470;melanosome;7.13147056499774e-18!GO:0003676;nucleic acid binding;7.9106321320067e-18!GO:0044432;endoplasmic reticulum part;9.80525302445794e-18!GO:0008134;transcription factor binding;1.42861095024504e-17!GO:0006996;organelle organization and biogenesis;2.22967903616938e-17!GO:0051649;establishment of cellular localization;3.99907113282096e-17!GO:0051641;cellular localization;5.82745552717083e-17!GO:0005746;mitochondrial respiratory chain;6.07725590762456e-17!GO:0051186;cofactor metabolic process;8.20384589450796e-17!GO:0022618;protein-RNA complex assembly;1.21447893159655e-16!GO:0016070;RNA metabolic process;1.22551658918625e-16!GO:0043228;non-membrane-bound organelle;9.62394181473196e-16!GO:0043232;intracellular non-membrane-bound organelle;9.62394181473196e-16!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.81452314504475e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.81729268291685e-15!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);2.02641080942064e-15!GO:0016462;pyrophosphatase activity;2.02641080942064e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;2.1889365936354e-15!GO:0017111;nucleoside-triphosphatase activity;3.77095653363598e-15!GO:0008135;translation factor activity, nucleic acid binding;5.26968179327447e-15!GO:0016874;ligase activity;8.01413010845495e-15!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);9.09559456300694e-15!GO:0005730;nucleolus;1.79198983368702e-14!GO:0050136;NADH dehydrogenase (quinone) activity;2.48738054478792e-14!GO:0003954;NADH dehydrogenase activity;2.48738054478792e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;2.48738054478792e-14!GO:0006605;protein targeting;3.88009045011769e-14!GO:0000166;nucleotide binding;4.99535142507438e-14!GO:0000502;proteasome complex (sensu Eukaryota);6.0521674210833e-14!GO:0048193;Golgi vesicle transport;8.23361595245587e-14!GO:0044265;cellular macromolecule catabolic process;1.20826774766097e-13!GO:0043285;biopolymer catabolic process;1.28401768319776e-13!GO:0006512;ubiquitin cycle;1.64791521135136e-13!GO:0005761;mitochondrial ribosome;2.54496829233521e-13!GO:0000313;organellar ribosome;2.54496829233521e-13!GO:0044248;cellular catabolic process;3.24386834439403e-13!GO:0006732;coenzyme metabolic process;4.16453469700846e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.94574356278875e-13!GO:0051603;proteolysis involved in cellular protein catabolic process;7.50500023689669e-13!GO:0042175;nuclear envelope-endoplasmic reticulum network;8.41322780443571e-13!GO:0042775;organelle ATP synthesis coupled electron transport;9.14951607129419e-13!GO:0042773;ATP synthesis coupled electron transport;9.14951607129419e-13!GO:0051082;unfolded protein binding;1.03376434385651e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.2332033653767e-12!GO:0045271;respiratory chain complex I;1.2332033653767e-12!GO:0005747;mitochondrial respiratory chain complex I;1.2332033653767e-12!GO:0009057;macromolecule catabolic process;1.46595955409224e-12!GO:0019941;modification-dependent protein catabolic process;1.51641632650494e-12!GO:0043632;modification-dependent macromolecule catabolic process;1.51641632650494e-12!GO:0044257;cellular protein catabolic process;1.64877004340293e-12!GO:0006511;ubiquitin-dependent protein catabolic process;1.68116011964428e-12!GO:0005789;endoplasmic reticulum membrane;1.75837189971526e-12!GO:0016192;vesicle-mediated transport;2.21697279929384e-12!GO:0005793;ER-Golgi intermediate compartment;2.85660827663108e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;3.52968399367738e-12!GO:0003743;translation initiation factor activity;9.70077642082975e-12!GO:0030163;protein catabolic process;1.07465757218622e-11!GO:0006259;DNA metabolic process;1.15668722492605e-11!GO:0016491;oxidoreductase activity;1.20582655209903e-11!GO:0012501;programmed cell death;1.71046679509156e-11!GO:0003712;transcription cofactor activity;1.75023603337837e-11!GO:0006915;apoptosis;3.78007819053863e-11!GO:0008219;cell death;9.7988069804296e-11!GO:0016265;death;9.7988069804296e-11!GO:0006413;translational initiation;1.00684382363898e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;1.00684382363898e-10!GO:0000375;RNA splicing, via transesterification reactions;1.00684382363898e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;1.00684382363898e-10!GO:0009055;electron carrier activity;1.0463802596798e-10!GO:0016604;nuclear body;2.43670462422172e-10!GO:0042254;ribosome biogenesis and assembly;5.62327405427187e-10!GO:0006446;regulation of translational initiation;1.07955652227487e-09!GO:0009259;ribonucleotide metabolic process;1.41858601381772e-09!GO:0008565;protein transporter activity;2.30253303898063e-09!GO:0045333;cellular respiration;2.31859807520109e-09!GO:0009060;aerobic respiration;2.36574738165993e-09!GO:0043412;biopolymer modification;2.48419943095849e-09!GO:0006091;generation of precursor metabolites and energy;2.63594923015692e-09!GO:0009150;purine ribonucleotide metabolic process;2.74059743415883e-09!GO:0048523;negative regulation of cellular process;3.23969261324062e-09!GO:0006366;transcription from RNA polymerase II promoter;4.18315241872328e-09!GO:0006163;purine nucleotide metabolic process;4.50494865835372e-09!GO:0005768;endosome;4.50494865835372e-09!GO:0017076;purine nucleotide binding;5.17277572042001e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;6.73645711817025e-09!GO:0008639;small protein conjugating enzyme activity;7.24827996316918e-09!GO:0009152;purine ribonucleotide biosynthetic process;7.31033651526046e-09!GO:0016607;nuclear speck;1.06498007343082e-08!GO:0004842;ubiquitin-protein ligase activity;1.09973030834892e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.23605184527966e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.24315366459069e-08!GO:0006164;purine nucleotide biosynthetic process;1.30363222590253e-08!GO:0009260;ribonucleotide biosynthetic process;1.30366350457475e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.3499017914771e-08!GO:0009144;purine nucleoside triphosphate metabolic process;1.3499017914771e-08!GO:0019787;small conjugating protein ligase activity;1.42671968811492e-08!GO:0009141;nucleoside triphosphate metabolic process;1.49643130660793e-08!GO:0006913;nucleocytoplasmic transport;1.52503952504698e-08!GO:0006461;protein complex assembly;1.69133543500675e-08!GO:0005635;nuclear envelope;1.79055862234372e-08!GO:0050794;regulation of cellular process;1.81297528922604e-08!GO:0032553;ribonucleotide binding;2.57224729496439e-08!GO:0032555;purine ribonucleotide binding;2.57224729496439e-08!GO:0051169;nuclear transport;2.61236318447457e-08!GO:0051246;regulation of protein metabolic process;2.9058226180902e-08!GO:0006464;protein modification process;3.01193717966558e-08!GO:0017038;protein import;3.10836500054614e-08!GO:0006888;ER to Golgi vesicle-mediated transport;3.21341953515799e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.05980347099792e-08!GO:0015078;hydrogen ion transmembrane transporter activity;4.13772994327667e-08!GO:0015986;ATP synthesis coupled proton transport;5.11623358831828e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;5.11623358831828e-08!GO:0009142;nucleoside triphosphate biosynthetic process;5.27791527423425e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;5.27791527423425e-08!GO:0009056;catabolic process;5.32580519716166e-08!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;5.75317434466784e-08!GO:0009145;purine nucleoside triphosphate biosynthetic process;5.75317434466784e-08!GO:0042623;ATPase activity, coupled;5.82590727096548e-08!GO:0048519;negative regulation of biological process;6.37295136336577e-08!GO:0031965;nuclear membrane;6.67781528086398e-08!GO:0016887;ATPase activity;8.80734656026328e-08!GO:0044431;Golgi apparatus part;1.06225984345369e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;1.08182295934844e-07!GO:0051188;cofactor biosynthetic process;1.08182295934844e-07!GO:0030120;vesicle coat;1.44756177909434e-07!GO:0030662;coated vesicle membrane;1.44756177909434e-07!GO:0046034;ATP metabolic process;1.48612977770797e-07!GO:0016881;acid-amino acid ligase activity;1.61687360574663e-07!GO:0048475;coated membrane;1.62913718944015e-07!GO:0030117;membrane coat;1.62913718944015e-07!GO:0006099;tricarboxylic acid cycle;1.68073306075662e-07!GO:0046356;acetyl-CoA catabolic process;1.68073306075662e-07!GO:0006399;tRNA metabolic process;2.23557896354321e-07!GO:0006974;response to DNA damage stimulus;2.30437303890092e-07!GO:0051187;cofactor catabolic process;2.38902257780834e-07!GO:0019829;cation-transporting ATPase activity;2.57729586386976e-07!GO:0005788;endoplasmic reticulum lumen;2.86874889998188e-07!GO:0031324;negative regulation of cellular metabolic process;3.31076027181791e-07!GO:0044440;endosomal part;3.82073579506542e-07!GO:0010008;endosome membrane;3.82073579506542e-07!GO:0009109;coenzyme catabolic process;3.89912939038876e-07!GO:0003924;GTPase activity;3.9782164389449e-07!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;4.0213663418845e-07!GO:0004812;aminoacyl-tRNA ligase activity;4.0213663418845e-07!GO:0016875;ligase activity, forming carbon-oxygen bonds;4.0213663418845e-07!GO:0006754;ATP biosynthetic process;5.62271710485643e-07!GO:0006753;nucleoside phosphate metabolic process;5.62271710485643e-07!GO:0006084;acetyl-CoA metabolic process;5.76363561431234e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;7.10510387082897e-07!GO:0008026;ATP-dependent helicase activity;7.39674036901509e-07!GO:0030554;adenyl nucleotide binding;7.83613155138862e-07!GO:0043038;amino acid activation;7.83613155138862e-07!GO:0006418;tRNA aminoacylation for protein translation;7.83613155138862e-07!GO:0043039;tRNA aminoacylation;7.83613155138862e-07!GO:0015980;energy derivation by oxidation of organic compounds;8.05731632684378e-07!GO:0007049;cell cycle;8.85754980991601e-07!GO:0016564;transcription repressor activity;1.05358532566229e-06!GO:0043687;post-translational protein modification;1.07297555260114e-06!GO:0003714;transcription corepressor activity;1.11279717469758e-06!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.33541116029944e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.3465077150817e-06!GO:0044453;nuclear membrane part;1.3465077150817e-06!GO:0005839;proteasome core complex (sensu Eukaryota);1.41532186849068e-06!GO:0005524;ATP binding;1.96441230337098e-06!GO:0030532;small nuclear ribonucleoprotein complex;2.13914635871226e-06!GO:0042981;regulation of apoptosis;2.19099799191643e-06!GO:0031252;leading edge;2.38124095091497e-06!GO:0009892;negative regulation of metabolic process;2.44896967288577e-06!GO:0009117;nucleotide metabolic process;2.60792862432046e-06!GO:0043067;regulation of programmed cell death;2.67392917313019e-06!GO:0006364;rRNA processing;2.86325838362386e-06!GO:0032559;adenyl ribonucleotide binding;2.96542542903489e-06!GO:0007005;mitochondrion organization and biogenesis;3.12097401674539e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;3.43672829859088e-06!GO:0005773;vacuole;3.47402822940798e-06!GO:0016853;isomerase activity;3.63062588545714e-06!GO:0016072;rRNA metabolic process;4.02114496980982e-06!GO:0032446;protein modification by small protein conjugation;4.02114496980982e-06!GO:0045259;proton-transporting ATP synthase complex;4.14543576063802e-06!GO:0004386;helicase activity;4.27854303420989e-06!GO:0005667;transcription factor complex;4.54139974110436e-06!GO:0016567;protein ubiquitination;4.55381245207715e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;4.55381245207715e-06!GO:0050789;regulation of biological process;4.57550686467116e-06!GO:0000151;ubiquitin ligase complex;4.57550686467116e-06!GO:0003713;transcription coactivator activity;5.2658511523141e-06!GO:0006916;anti-apoptosis;6.10048235101056e-06!GO:0005770;late endosome;6.9060194203417e-06!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.07580125973795e-06!GO:0004298;threonine endopeptidase activity;7.13336981550329e-06!GO:0009108;coenzyme biosynthetic process;7.18598920434463e-06!GO:0065002;intracellular protein transport across a membrane;7.92207310791519e-06!GO:0043566;structure-specific DNA binding;8.59389309809759e-06!GO:0031988;membrane-bound vesicle;9.31840354205744e-06!GO:0016023;cytoplasmic membrane-bound vesicle;9.31840354205744e-06!GO:0005798;Golgi-associated vesicle;9.37863374944567e-06!GO:0051789;response to protein stimulus;9.84361419621347e-06!GO:0006986;response to unfolded protein;9.84361419621347e-06!GO:0008361;regulation of cell size;9.88444635794145e-06!GO:0016563;transcription activator activity;1.03504499898681e-05!GO:0000074;regulation of progression through cell cycle;1.03551719751777e-05!GO:0000245;spliceosome assembly;1.06819906680179e-05!GO:0051726;regulation of cell cycle;1.10864992025108e-05!GO:0000139;Golgi membrane;1.11539192963774e-05!GO:0030133;transport vesicle;1.16259578618403e-05!GO:0043069;negative regulation of programmed cell death;1.26516012258226e-05!GO:0016049;cell growth;1.34154829543203e-05!GO:0051170;nuclear import;1.3526503051524e-05!GO:0045786;negative regulation of progression through cell cycle;1.38888381003804e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.4375201177324e-05!GO:0008654;phospholipid biosynthetic process;1.50317132402175e-05!GO:0043066;negative regulation of apoptosis;1.58706752935457e-05!GO:0006281;DNA repair;1.6083091595863e-05!GO:0005643;nuclear pore;1.64198043069684e-05!GO:0016859;cis-trans isomerase activity;1.69640627720838e-05!GO:0006606;protein import into nucleus;1.7623987128474e-05!GO:0006752;group transfer coenzyme metabolic process;1.97507872803345e-05!GO:0005762;mitochondrial large ribosomal subunit;2.08463769857091e-05!GO:0000315;organellar large ribosomal subunit;2.08463769857091e-05!GO:0016787;hydrolase activity;2.1451159103787e-05!GO:0003697;single-stranded DNA binding;2.27483741915376e-05!GO:0009719;response to endogenous stimulus;2.50984753926293e-05!GO:0019843;rRNA binding;2.55783889585154e-05!GO:0000323;lytic vacuole;2.66422508842415e-05!GO:0005764;lysosome;2.66422508842415e-05!GO:0019222;regulation of metabolic process;2.73425174559397e-05!GO:0031982;vesicle;3.01659904804271e-05!GO:0006357;regulation of transcription from RNA polymerase II promoter;3.34407102207134e-05!GO:0031410;cytoplasmic vesicle;3.51405778177248e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;3.95571327731555e-05!GO:0046930;pore complex;4.00491276659946e-05!GO:0006613;cotranslational protein targeting to membrane;4.42806488916511e-05!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;5.43077940740395e-05!GO:0019899;enzyme binding;5.50191561500113e-05!GO:0016481;negative regulation of transcription;6.01118339644955e-05!GO:0022402;cell cycle process;6.11028370888647e-05!GO:0019867;outer membrane;7.29459636583141e-05!GO:0001558;regulation of cell growth;7.45341352432379e-05!GO:0031968;organelle outer membrane;7.86317638972934e-05!GO:0003724;RNA helicase activity;7.9886178746139e-05!GO:0008610;lipid biosynthetic process;8.11072439803148e-05!GO:0045454;cell redox homeostasis;8.11072439803148e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;8.16311687420277e-05!GO:0050657;nucleic acid transport;0.000125931908253084!GO:0051236;establishment of RNA localization;0.000125931908253084!GO:0050658;RNA transport;0.000125931908253084!GO:0005769;early endosome;0.000141796456398098!GO:0006403;RNA localization;0.000145844795843433!GO:0043021;ribonucleoprotein binding;0.000156757767262418!GO:0006323;DNA packaging;0.000171338137789349!GO:0005525;GTP binding;0.000176859145895711!GO:0016126;sterol biosynthetic process;0.00018584885675029!GO:0044262;cellular carbohydrate metabolic process;0.000188429309296391!GO:0005741;mitochondrial outer membrane;0.000194543502832576!GO:0030867;rough endoplasmic reticulum membrane;0.000195540119451815!GO:0005791;rough endoplasmic reticulum;0.000209459884738814!GO:0033116;ER-Golgi intermediate compartment membrane;0.000249600431194178!GO:0006118;electron transport;0.000324265803849269!GO:0048522;positive regulation of cellular process;0.000329681153417483!GO:0046474;glycerophospholipid biosynthetic process;0.000349345089066562!GO:0030036;actin cytoskeleton organization and biogenesis;0.000351954181398168!GO:0050662;coenzyme binding;0.000353564419163425!GO:0006612;protein targeting to membrane;0.000358794426525163!GO:0000314;organellar small ribosomal subunit;0.000366149856210511!GO:0005763;mitochondrial small ribosomal subunit;0.000366149856210511!GO:0005048;signal sequence binding;0.000372078780689881!GO:0006414;translational elongation;0.000389616478082658!GO:0016779;nucleotidyltransferase activity;0.000391736194069483!GO:0051427;hormone receptor binding;0.000465484625030129!GO:0005885;Arp2/3 protein complex;0.000466877382592562!GO:0065004;protein-DNA complex assembly;0.000521284814189731!GO:0030663;COPI coated vesicle membrane;0.000521284814189731!GO:0030126;COPI vesicle coat;0.000521284814189731!GO:0016740;transferase activity;0.000561036374610163!GO:0007243;protein kinase cascade;0.000563760271547688!GO:0016568;chromatin modification;0.000578620027179428!GO:0007050;cell cycle arrest;0.000588594875106385!GO:0030027;lamellipodium;0.000752538597179768!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000835569707183958!GO:0005852;eukaryotic translation initiation factor 3 complex;0.000869083922385442!GO:0008186;RNA-dependent ATPase activity;0.000883754441923349!GO:0035257;nuclear hormone receptor binding;0.000886657406194775!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000900203652720259!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000912343019257667!GO:0016044;membrane organization and biogenesis;0.000925161359937981!GO:0008250;oligosaccharyl transferase complex;0.000990286750585143!GO:0065007;biological regulation;0.00102432318372714!GO:0030137;COPI-coated vesicle;0.00104757876680577!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0010585559127194!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00107511308250796!GO:0006891;intra-Golgi vesicle-mediated transport;0.00107601453063113!GO:0022890;inorganic cation transmembrane transporter activity;0.0010915116876088!GO:0003729;mRNA binding;0.0010915116876088!GO:0004576;oligosaccharyl transferase activity;0.00113004391845073!GO:0051920;peroxiredoxin activity;0.00116134769206338!GO:0032561;guanyl ribonucleotide binding;0.001161942523848!GO:0019001;guanyl nucleotide binding;0.001161942523848!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.00116767931533867!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.0011879744211501!GO:0043623;cellular protein complex assembly;0.00120036847847943!GO:0006793;phosphorus metabolic process;0.0012071230437615!GO:0006796;phosphate metabolic process;0.0012071230437615!GO:0043284;biopolymer biosynthetic process;0.00121896705402234!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00142247530574641!GO:0051028;mRNA transport;0.00142776736983004!GO:0040008;regulation of growth;0.00151864038031405!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00154290173165646!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00154290173165646!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00154290173165646!GO:0043681;protein import into mitochondrion;0.00168493739846963!GO:0003690;double-stranded DNA binding;0.00174533120008255!GO:0046489;phosphoinositide biosynthetic process;0.00175364064957732!GO:0045941;positive regulation of transcription;0.00176559780195229!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00183679757371518!GO:0015399;primary active transmembrane transporter activity;0.00183679757371518!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.00184017631792454!GO:0051276;chromosome organization and biogenesis;0.00184765881302682!GO:0030029;actin filament-based process;0.00189757255475651!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0020667012397014!GO:0051329;interphase of mitotic cell cycle;0.0020667012397014!GO:0005905;coated pit;0.00213608359259596!GO:0045893;positive regulation of transcription, DNA-dependent;0.00225236872380156!GO:0006260;DNA replication;0.00225829511092731!GO:0016310;phosphorylation;0.0022665279605597!GO:0004004;ATP-dependent RNA helicase activity;0.00232581619807613!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00237966609459179!GO:0046467;membrane lipid biosynthetic process;0.00237966609459179!GO:0045792;negative regulation of cell size;0.00241496552189814!GO:0051252;regulation of RNA metabolic process;0.00241645630240398!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0025013093198941!GO:0015002;heme-copper terminal oxidase activity;0.0025013093198941!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0025013093198941!GO:0004129;cytochrome-c oxidase activity;0.0025013093198941!GO:0009165;nucleotide biosynthetic process;0.00264409281379286!GO:0043488;regulation of mRNA stability;0.00264409281379286!GO:0043487;regulation of RNA stability;0.00264409281379286!GO:0000278;mitotic cell cycle;0.00285159837488405!GO:0045892;negative regulation of transcription, DNA-dependent;0.00287451060352392!GO:0030308;negative regulation of cell growth;0.00295093631526325!GO:0019752;carboxylic acid metabolic process;0.00300684185632576!GO:0030118;clathrin coat;0.00309311535174084!GO:0048471;perinuclear region of cytoplasm;0.00316220037768551!GO:0006695;cholesterol biosynthetic process;0.00324608880946736!GO:0031323;regulation of cellular metabolic process;0.00324608880946736!GO:0006402;mRNA catabolic process;0.00328821883452709!GO:0006082;organic acid metabolic process;0.00333464672764338!GO:0065009;regulation of a molecular function;0.00344071282686887!GO:0051287;NAD binding;0.00392209445989537!GO:0030658;transport vesicle membrane;0.00395827468139635!GO:0018196;peptidyl-asparagine modification;0.00396977407310538!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.00396977407310538!GO:0004177;aminopeptidase activity;0.00398490636584705!GO:0030041;actin filament polymerization;0.0040294761116702!GO:0022408;negative regulation of cell-cell adhesion;0.00443863392729141!GO:0006383;transcription from RNA polymerase III promoter;0.00451466127560011!GO:0003899;DNA-directed RNA polymerase activity;0.00456181838459039!GO:0015992;proton transport;0.00457227748246698!GO:0008180;signalosome;0.00467477390430587!GO:0030521;androgen receptor signaling pathway;0.00487328412344072!GO:0048500;signal recognition particle;0.00512258477306084!GO:0051325;interphase;0.00520682098668838!GO:0031902;late endosome membrane;0.00529551843101272!GO:0006818;hydrogen transport;0.00558561839039707!GO:0003746;translation elongation factor activity;0.00560468714972403!GO:0008154;actin polymerization and/or depolymerization;0.00576565916310265!GO:0045926;negative regulation of growth;0.00578151066558438!GO:0001726;ruffle;0.00582536360044638!GO:0048518;positive regulation of biological process;0.00583469875611767!GO:0030132;clathrin coat of coated pit;0.0058416104545195!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00589068931475608!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00589068931475608!GO:0048468;cell development;0.00597488068055271!GO:0005813;centrosome;0.00613354443336354!GO:0048487;beta-tubulin binding;0.00638305819897826!GO:0051540;metal cluster binding;0.00658571379828723!GO:0051536;iron-sulfur cluster binding;0.00658571379828723!GO:0001872;zymosan binding;0.00662119829540644!GO:0001878;response to yeast;0.00662119829540644!GO:0001953;negative regulation of cell-matrix adhesion;0.00665503181644651!GO:0051128;regulation of cellular component organization and biogenesis;0.00689974159448861!GO:0030660;Golgi-associated vesicle membrane;0.00690557512231856!GO:0006626;protein targeting to mitochondrion;0.00691191525130914!GO:0017166;vinculin binding;0.00691191525130914!GO:0006333;chromatin assembly or disassembly;0.00691554256700663!GO:0007006;mitochondrial membrane organization and biogenesis;0.00713407809337777!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.00718167314480697!GO:0006979;response to oxidative stress;0.00732988732772716!GO:0046483;heterocycle metabolic process;0.00742077510340413!GO:0031901;early endosome membrane;0.00757433344753842!GO:0031625;ubiquitin protein ligase binding;0.00760741350245391!GO:0005869;dynactin complex;0.00780430497489711!GO:0031072;heat shock protein binding;0.00792866187584827!GO:0006497;protein amino acid lipidation;0.008182267943855!GO:0006839;mitochondrial transport;0.008182267943855!GO:0006740;NADPH regeneration;0.008182267943855!GO:0006098;pentose-phosphate shunt;0.008182267943855!GO:0043492;ATPase activity, coupled to movement of substances;0.00840590855339597!GO:0030127;COPII vesicle coat;0.00845118602883899!GO:0012507;ER to Golgi transport vesicle membrane;0.00845118602883899!GO:0008632;apoptotic program;0.00848207480258615!GO:0008139;nuclear localization sequence binding;0.00848207480258615!GO:0006790;sulfur metabolic process;0.00848207480258615!GO:0006352;transcription initiation;0.0085670954617973!GO:0042158;lipoprotein biosynthetic process;0.00864930777597995!GO:0006650;glycerophospholipid metabolic process;0.00864930777597995!GO:0042802;identical protein binding;0.00904359715509015!GO:0030134;ER to Golgi transport vesicle;0.00920875130041633!GO:0016125;sterol metabolic process;0.00945019888448608!GO:0006509;membrane protein ectodomain proteolysis;0.00945019888448608!GO:0033619;membrane protein proteolysis;0.00945019888448608!GO:0050811;GABA receptor binding;0.00947254755503681!GO:0030176;integral to endoplasmic reticulum membrane;0.00949161582086653!GO:0000082;G1/S transition of mitotic cell cycle;0.00995016732008944!GO:0000059;protein import into nucleus, docking;0.00995016732008944!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00995016732008944!GO:0045047;protein targeting to ER;0.00995016732008944!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0100747044720021!GO:0051168;nuclear export;0.0103664269756117!GO:0016408;C-acyltransferase activity;0.0105575679627643!GO:0005815;microtubule organizing center;0.0105746828862193!GO:0030518;steroid hormone receptor signaling pathway;0.0106408646750156!GO:0006595;polyamine metabolic process;0.0108209387519873!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.0109697562949549!GO:0008047;enzyme activator activity;0.0110035764736738!GO:0006778;porphyrin metabolic process;0.0112107121683858!GO:0033013;tetrapyrrole metabolic process;0.0112107121683858!GO:0007034;vacuolar transport;0.0118189424050983!GO:0016197;endosome transport;0.0119059449316089!GO:0006417;regulation of translation;0.012082348239026!GO:0030833;regulation of actin filament polymerization;0.0121561871744373!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.012434448609054!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0127932541978173!GO:0008312;7S RNA binding;0.0128194370654644!GO:0006401;RNA catabolic process;0.0131688526284949!GO:0030880;RNA polymerase complex;0.0131890723507777!GO:0003711;transcription elongation regulator activity;0.0133360237155857!GO:0006350;transcription;0.0133379097243364!GO:0051539;4 iron, 4 sulfur cluster binding;0.0134182181927871!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.013745456971815!GO:0006950;response to stress;0.0139282995554091!GO:0050681;androgen receptor binding;0.0140846050245055!GO:0016363;nuclear matrix;0.0141936589160214!GO:0006506;GPI anchor biosynthetic process;0.0142121397807183!GO:0035258;steroid hormone receptor binding;0.0150045772931569!GO:0009967;positive regulation of signal transduction;0.0150886054203396!GO:0043022;ribosome binding;0.0150886054203396!GO:0051087;chaperone binding;0.0155056437627949!GO:0033559;unsaturated fatty acid metabolic process;0.0158761156092953!GO:0006636;unsaturated fatty acid biosynthetic process;0.0158761156092953!GO:0008286;insulin receptor signaling pathway;0.0159183786002539!GO:0022407;regulation of cell-cell adhesion;0.016039375945118!GO:0005862;muscle thin filament tropomyosin;0.0163857994785176!GO:0048037;cofactor binding;0.0163857994785176!GO:0030119;AP-type membrane coat adaptor complex;0.0164867300697545!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0174185157324409!GO:0033043;regulation of organelle organization and biogenesis;0.0174185157324409!GO:0010468;regulation of gene expression;0.0176201460145637!GO:0031529;ruffle organization and biogenesis;0.0178683786955031!GO:0006289;nucleotide-excision repair;0.0181371473982856!GO:0006354;RNA elongation;0.0184029934473844!GO:0005100;Rho GTPase activator activity;0.0189721715461529!GO:0016251;general RNA polymerase II transcription factor activity;0.0191256677895179!GO:0030145;manganese ion binding;0.0193496197875773!GO:0035035;histone acetyltransferase binding;0.0194242990358429!GO:0045936;negative regulation of phosphate metabolic process;0.020348381317629!GO:0030659;cytoplasmic vesicle membrane;0.0223090389409051!GO:0008383;manganese superoxide dismutase activity;0.02273326270639!GO:0001315;age-dependent response to reactive oxygen species;0.02273326270639!GO:0033673;negative regulation of kinase activity;0.022756064381765!GO:0006469;negative regulation of protein kinase activity;0.022756064381765!GO:0015630;microtubule cytoskeleton;0.022765630936082!GO:0016721;oxidoreductase activity, acting on superoxide radicals as acceptor;0.0233216506765186!GO:0004784;superoxide dismutase activity;0.0233216506765186!GO:0042168;heme metabolic process;0.0235620686194184!GO:0007264;small GTPase mediated signal transduction;0.0235620686194184!GO:0006505;GPI anchor metabolic process;0.0240822461561955!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.0240822461561955!GO:0009112;nucleobase metabolic process;0.0241015807073056!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0242518772115011!GO:0032984;macromolecular complex disassembly;0.024702323888077!GO:0017015;regulation of transforming growth factor beta receptor signaling pathway;0.0249562705030476!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.0249892961281097!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0250706201972179!GO:0000428;DNA-directed RNA polymerase complex;0.0250706201972179!GO:0006779;porphyrin biosynthetic process;0.0250706201972179!GO:0033014;tetrapyrrole biosynthetic process;0.0250706201972179!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.0255243244851703!GO:0043433;negative regulation of transcription factor activity;0.0255606465283782!GO:0016616;oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;0.0255687610708474!GO:0043065;positive regulation of apoptosis;0.0261424206329466!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.0261424206329466!GO:0044452;nucleolar part;0.0261983873208044!GO:0016860;intramolecular oxidoreductase activity;0.0262302773876043!GO:0005684;U2-dependent spliceosome;0.0263407136376596!GO:0016272;prefoldin complex;0.0263407136376596!GO:0030131;clathrin adaptor complex;0.0264123733033593!GO:0008064;regulation of actin polymerization and/or depolymerization;0.0266930773444112!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0272628760404532!GO:0005832;chaperonin-containing T-complex;0.027567772086375!GO:0031326;regulation of cellular biosynthetic process;0.0281939966768623!GO:0045045;secretory pathway;0.0292371698011033!GO:0006897;endocytosis;0.0299074136865055!GO:0010324;membrane invagination;0.0299074136865055!GO:0007041;lysosomal transport;0.0300315032577809!GO:0051348;negative regulation of transferase activity;0.0303762713063644!GO:0006376;mRNA splice site selection;0.0303762713063644!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0303762713063644!GO:0000339;RNA cap binding;0.0303762713063644!GO:0051235;maintenance of localization;0.030378290696034!GO:0000785;chromatin;0.0306911595417429!GO:0044438;microbody part;0.0306911595417429!GO:0044439;peroxisomal part;0.0306911595417429!GO:0009119;ribonucleoside metabolic process;0.030919964095048!GO:0006739;NADP metabolic process;0.030919964095048!GO:0008320;protein transmembrane transporter activity;0.0309310967249595!GO:0044433;cytoplasmic vesicle part;0.0311917969517483!GO:0043068;positive regulation of programmed cell death;0.0312545824478236!GO:0008092;cytoskeletal protein binding;0.0314871838987069!GO:0009116;nucleoside metabolic process;0.0315316582248184!GO:0000049;tRNA binding;0.0319625040802094!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0319625040802094!GO:0030125;clathrin vesicle coat;0.0320005010045975!GO:0030665;clathrin coated vesicle membrane;0.0320005010045975!GO:0030384;phosphoinositide metabolic process;0.0321726787109011!GO:0006769;nicotinamide metabolic process;0.0330172836183209!GO:0006892;post-Golgi vesicle-mediated transport;0.033314937908577!GO:0051059;NF-kappaB binding;0.033314937908577!GO:0005777;peroxisome;0.033314937908577!GO:0042579;microbody;0.033314937908577!GO:0005774;vacuolar membrane;0.0336747480384568!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0336747480384568!GO:0008033;tRNA processing;0.0336747480384568!GO:0006733;oxidoreduction coenzyme metabolic process;0.0339448063048472!GO:0051336;regulation of hydrolase activity;0.0339965450996883!GO:0044255;cellular lipid metabolic process;0.0341903061015755!GO:0007021;tubulin folding;0.0343528358404448!GO:0001952;regulation of cell-matrix adhesion;0.0351937901531085!GO:0007030;Golgi organization and biogenesis;0.0355892405016312!GO:0000209;protein polyubiquitination;0.0356347836531481!GO:0016614;oxidoreductase activity, acting on CH-OH group of donors;0.0357659618718057!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0359514222204228!GO:0051045;negative regulation of membrane protein ectodomain proteolysis;0.0361988295749818!GO:0051043;regulation of membrane protein ectodomain proteolysis;0.0361988295749818!GO:0030031;cell projection biogenesis;0.0361991891205754!GO:0050790;regulation of catalytic activity;0.0361991891205754!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0371693082057352!GO:0007040;lysosome organization and biogenesis;0.0377781448001489!GO:0006368;RNA elongation from RNA polymerase II promoter;0.037912053304282!GO:0042326;negative regulation of phosphorylation;0.0384839407471704!GO:0006635;fatty acid beta-oxidation;0.0388977679993756!GO:0003684;damaged DNA binding;0.0395928369658253!GO:0030522;intracellular receptor-mediated signaling pathway;0.0396312144387512!GO:0031124;mRNA 3'-end processing;0.0401146374632926!GO:0005694;chromosome;0.0403757387590426!GO:0016407;acetyltransferase activity;0.0403948501967855!GO:0006701;progesterone biosynthetic process;0.04109709286804!GO:0045185;maintenance of protein localization;0.0420215128461416!GO:0008097;5S rRNA binding;0.0421209129480084!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.042189407476838!GO:0008243;plasminogen activator activity;0.0425022025240653!GO:0003756;protein disulfide isomerase activity;0.0425022025240653!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.0425022025240653!GO:0043241;protein complex disassembly;0.0425804391014911!GO:0004300;enoyl-CoA hydratase activity;0.0431303085601517!GO:0000030;mannosyltransferase activity;0.0431560334437242!GO:0007033;vacuole organization and biogenesis;0.0431740555200077!GO:0004448;isocitrate dehydrogenase activity;0.0433483065286576!GO:0017091;AU-rich element binding;0.0433483065286576!GO:0050779;RNA destabilization;0.0433483065286576!GO:0000289;poly(A) tail shortening;0.0433483065286576!GO:0031272;regulation of pseudopodium formation;0.0433483065286576!GO:0031269;pseudopodium formation;0.0433483065286576!GO:0031344;regulation of cell projection organization and biogenesis;0.0433483065286576!GO:0031268;pseudopodium organization and biogenesis;0.0433483065286576!GO:0031346;positive regulation of cell projection organization and biogenesis;0.0433483065286576!GO:0031274;positive regulation of pseudopodium formation;0.0433483065286576!GO:0006607;NLS-bearing substrate import into nucleus;0.0447609472120146!GO:0008430;selenium binding;0.0448861684276432!GO:0031903;microbody membrane;0.0450074070001222!GO:0005778;peroxisomal membrane;0.0450074070001222!GO:0007179;transforming growth factor beta receptor signaling pathway;0.0452439983093798!GO:0008168;methyltransferase activity;0.0453467901845159!GO:0005096;GTPase activator activity;0.0453467901845159!GO:0006672;ceramide metabolic process;0.0479431984143914!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0480942423724534!GO:0012506;vesicle membrane;0.0481904763176773!GO:0046914;transition metal ion binding;0.0484000191969873!GO:0000118;histone deacetylase complex;0.0484000191969873!GO:0030508;thiol-disulfide exchange intermediate activity;0.0484000191969873!GO:0016628;oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;0.0487476871607663!GO:0006783;heme biosynthetic process;0.0496748853874805 | |||
|sample_id=11504 | |sample_id=11504 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 100: | ||
|sample_tissue=hair follicle | |sample_tissue=hair follicle | ||
|top_motifs=NKX2-1,4:2.22719659631;FOXL1:2.14123911103;RXR{A,B,G}:2.11402142717;GZF1:2.09361936322;NKX2-2,8:1.92914844638;UFEwm:1.69426059799;ALX4:1.66988342111;AIRE:1.6165483428;EBF1:1.53190470501;ZNF238:1.5116452618;NR3C1:1.4166404261;ESR1:1.40071328492;KLF4:1.36255839082;FOXD3:1.34675728333;ATF6:1.31653373208;NKX3-1:1.29330727336;EVI1:1.27979950969;NFE2L1:1.23920507462;NFATC1..3:1.20470367151;SRF:1.17304855937;SOX5:1.06901119391;HMX1:1.06014463889;FOXO1,3,4:1.03958513299;HMGA1,2:1.02888035753;TP53:0.927398442601;PAX1,9:0.920454192344;TAL1_TCF{3,4,12}:0.918282511218;XBP1:0.91732193583;HES1:0.879036432044;RXRA_VDR{dimer}:0.876450970524;NKX3-2:0.844314835749;HIF1A:0.833877162315;NKX6-1,2:0.823478243384;TEAD1:0.815018046745;GATA4:0.814192052655;BPTF:0.797063780625;EN1,2:0.795608856019;GFI1B:0.77010012721;TFAP4:0.747066787732;ZBTB16:0.70538819121;GLI1..3:0.656150529261;TLX1..3_NFIC{dimer}:0.60720761387;MYBL2:0.568378472602;DBP:0.551713459642;ZIC1..3:0.472577425121;HOX{A5,B5}:0.457131052685;PAX5:0.441752721702;bHLH_family:0.42119739084;NANOG{mouse}:0.407219792276;TOPORS:0.391574192669;TFCP2:0.380579858408;DMAP1_NCOR{1,2}_SMARC:0.377979693673;HAND1,2:0.377970968794;HSF1,2:0.370543913131;HOX{A4,D4}:0.347712351301;NHLH1,2:0.341818920223;NFIX:0.338242871401;ZBTB6:0.330104014263;STAT2,4,6:0.324381710775;ZNF384:0.324330562916;YY1:0.320357822029;FOX{I1,J2}:0.320222428675;PRDM1:0.297640963988;IKZF1:0.295924499827;PATZ1:0.292810525184;MZF1:0.278675619254;ESRRA:0.277636270812;GTF2I:0.271555767703;IRF1,2:0.25744220469;GTF2A1,2:0.253073429224;AR:0.24594863635;NR6A1:0.224881606979;MAFB:0.221147987839;NR1H4:0.218359512599;HOX{A6,A7,B6,B7}:0.21751536105;FOX{D1,D2}:0.202104181729;FOXP3:0.186737623581;TBP:0.184729598747;AHR_ARNT_ARNT2:0.159841168406;TFAP2{A,C}:0.15921547213;ELK1,4_GABP{A,B1}:0.132410968916;HLF:0.113973619702;SOX17:0.111322053512;LHX3,4:0.0827985442566;MYFfamily:0.069280146463;NFE2L2:0.0559712453006;MTF1:0.0498601704687;ARID5B:0.0439720896153;MAZ:0.0329920369675;MEF2{A,B,C,D}:0.0326867278871;STAT1,3:0.0233153818639;LEF1_TCF7_TCF7L1,2:0.0229060618701;CEBPA,B_DDIT3:0.0171913725439;ZNF423:0.0171254294755;SPZ1:-0.0123952270008;RUNX1..3:-0.0170513698534;HNF4A_NR2F1,2:-0.0390721785903;STAT5{A,B}:-0.0443282425302;MED-1{core}:-0.053090487771;HNF1A:-0.0783896588876;RFX1:-0.0842566133374;GCM1,2:-0.0926189913482;BACH2:-0.0989303347493;IKZF2:-0.102320415967;RREB1:-0.105143189783;REST:-0.12220910802;CDX1,2,4:-0.138025000343;NFKB1_REL_RELA:-0.139434154158;PRRX1,2:-0.153702367639;NFE2:-0.161776876322;SMAD1..7,9:-0.203802392554;TGIF1:-0.212423181153;PAX8:-0.213650499704;FOS_FOS{B,L1}_JUN{B,D}:-0.229261767655;ATF5_CREB3:-0.233015956734;HIC1:-0.234510911276;ZNF148:-0.252013616464;PAX4:-0.259777740273;SP1:-0.275052231316;HBP1_HMGB_SSRP1_UBTF:-0.302336941419;RFX2..5_RFXANK_RFXAP:-0.303919890128;TFAP2B:-0.304275853711;POU3F1..4:-0.304812702798;CREB1:-0.30816818061;TEF:-0.351991933366;ZNF143:-0.353230429379;MTE{core}:-0.366102018114;NFIL3:-0.381419822091;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.386664392741;XCPE1{core}:-0.393503156694;TBX4,5:-0.393999847505;EGR1..3:-0.394736125354;ATF4:-0.399090460753;TFDP1:-0.400863937081;JUN:-0.408237225581;T:-0.413241906483;IRF7:-0.422084099946;ONECUT1,2:-0.42547012987;NKX2-3_NKX2-5:-0.42629708561;PAX3,7:-0.434479764968;ELF1,2,4:-0.442610906968;FOSL2:-0.455460916448;SPI1:-0.465462671768;SREBF1,2:-0.465664301279;POU6F1:-0.484377737957;FOXN1:-0.489097507206;ETS1,2:-0.493550345636;RORA:-0.511390453018;NRF1:-0.521793949936;RBPJ:-0.556193753912;GFI1:-0.559018479287;ZFP161:-0.572641195137;HOXA9_MEIS1:-0.589313492134;FOXP1:-0.599082148307;SPIB:-0.634577162017;MYB:-0.650817710017;ATF2:-0.68558056051;FOXA2:-0.694105995994;POU2F1..3:-0.700021647676;PBX1:-0.705005077435;CUX2:-0.712971924193;PAX2:-0.728375800014;CDC5L:-0.756553950667;PITX1..3:-0.803505206286;ADNP_IRX_SIX_ZHX:-0.86880358408;GATA6:-0.88505097019;TLX2:-0.899051020635;FOXQ1:-0.9195730714;PDX1:-0.942616945128;CRX:-0.95341737437;BREu{core}:-0.954295103159;E2F1..5:-0.964914945027;FOXM1:-0.966192009841;SNAI1..3:-0.99226673594;ALX1:-0.99523678645;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.99565494363;POU1F1:-1.05431496433;NFY{A,B,C}:-1.06516377002;FOX{F1,F2,J1}:-1.07481903262;LMO2:-1.13885549929;SOX2:-1.15298368107;NANOG:-1.1810765651;POU5F1:-1.20949953159;EP300:-1.26689894255;ZEB1:-1.28955644521;OCT4_SOX2{dimer}:-1.29265179238;PAX6:-1.30921707725;SOX{8,9,10}:-1.46285137985;MYOD1:-1.57861093451;NR5A1,2:-1.68340747124;PPARG:-1.88360863137;VSX1,2:-2.00327298243 | |top_motifs=NKX2-1,4:2.22719659631;FOXL1:2.14123911103;RXR{A,B,G}:2.11402142717;GZF1:2.09361936322;NKX2-2,8:1.92914844638;UFEwm:1.69426059799;ALX4:1.66988342111;AIRE:1.6165483428;EBF1:1.53190470501;ZNF238:1.5116452618;NR3C1:1.4166404261;ESR1:1.40071328492;KLF4:1.36255839082;FOXD3:1.34675728333;ATF6:1.31653373208;NKX3-1:1.29330727336;EVI1:1.27979950969;NFE2L1:1.23920507462;NFATC1..3:1.20470367151;SRF:1.17304855937;SOX5:1.06901119391;HMX1:1.06014463889;FOXO1,3,4:1.03958513299;HMGA1,2:1.02888035753;TP53:0.927398442601;PAX1,9:0.920454192344;TAL1_TCF{3,4,12}:0.918282511218;XBP1:0.91732193583;HES1:0.879036432044;RXRA_VDR{dimer}:0.876450970524;NKX3-2:0.844314835749;HIF1A:0.833877162315;NKX6-1,2:0.823478243384;TEAD1:0.815018046745;GATA4:0.814192052655;BPTF:0.797063780625;EN1,2:0.795608856019;GFI1B:0.77010012721;TFAP4:0.747066787732;ZBTB16:0.70538819121;GLI1..3:0.656150529261;TLX1..3_NFIC{dimer}:0.60720761387;MYBL2:0.568378472602;DBP:0.551713459642;ZIC1..3:0.472577425121;HOX{A5,B5}:0.457131052685;PAX5:0.441752721702;bHLH_family:0.42119739084;NANOG{mouse}:0.407219792276;TOPORS:0.391574192669;TFCP2:0.380579858408;DMAP1_NCOR{1,2}_SMARC:0.377979693673;HAND1,2:0.377970968794;HSF1,2:0.370543913131;HOX{A4,D4}:0.347712351301;NHLH1,2:0.341818920223;NFIX:0.338242871401;ZBTB6:0.330104014263;STAT2,4,6:0.324381710775;ZNF384:0.324330562916;YY1:0.320357822029;FOX{I1,J2}:0.320222428675;PRDM1:0.297640963988;IKZF1:0.295924499827;PATZ1:0.292810525184;MZF1:0.278675619254;ESRRA:0.277636270812;GTF2I:0.271555767703;IRF1,2:0.25744220469;GTF2A1,2:0.253073429224;AR:0.24594863635;NR6A1:0.224881606979;MAFB:0.221147987839;NR1H4:0.218359512599;HOX{A6,A7,B6,B7}:0.21751536105;FOX{D1,D2}:0.202104181729;FOXP3:0.186737623581;TBP:0.184729598747;AHR_ARNT_ARNT2:0.159841168406;TFAP2{A,C}:0.15921547213;ELK1,4_GABP{A,B1}:0.132410968916;HLF:0.113973619702;SOX17:0.111322053512;LHX3,4:0.0827985442566;MYFfamily:0.069280146463;NFE2L2:0.0559712453006;MTF1:0.0498601704687;ARID5B:0.0439720896153;MAZ:0.0329920369675;MEF2{A,B,C,D}:0.0326867278871;STAT1,3:0.0233153818639;LEF1_TCF7_TCF7L1,2:0.0229060618701;CEBPA,B_DDIT3:0.0171913725439;ZNF423:0.0171254294755;SPZ1:-0.0123952270008;RUNX1..3:-0.0170513698534;HNF4A_NR2F1,2:-0.0390721785903;STAT5{A,B}:-0.0443282425302;MED-1{core}:-0.053090487771;HNF1A:-0.0783896588876;RFX1:-0.0842566133374;GCM1,2:-0.0926189913482;BACH2:-0.0989303347493;IKZF2:-0.102320415967;RREB1:-0.105143189783;REST:-0.12220910802;CDX1,2,4:-0.138025000343;NFKB1_REL_RELA:-0.139434154158;PRRX1,2:-0.153702367639;NFE2:-0.161776876322;SMAD1..7,9:-0.203802392554;TGIF1:-0.212423181153;PAX8:-0.213650499704;FOS_FOS{B,L1}_JUN{B,D}:-0.229261767655;ATF5_CREB3:-0.233015956734;HIC1:-0.234510911276;ZNF148:-0.252013616464;PAX4:-0.259777740273;SP1:-0.275052231316;HBP1_HMGB_SSRP1_UBTF:-0.302336941419;RFX2..5_RFXANK_RFXAP:-0.303919890128;TFAP2B:-0.304275853711;POU3F1..4:-0.304812702798;CREB1:-0.30816818061;TEF:-0.351991933366;ZNF143:-0.353230429379;MTE{core}:-0.366102018114;NFIL3:-0.381419822091;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.386664392741;XCPE1{core}:-0.393503156694;TBX4,5:-0.393999847505;EGR1..3:-0.394736125354;ATF4:-0.399090460753;TFDP1:-0.400863937081;JUN:-0.408237225581;T:-0.413241906483;IRF7:-0.422084099946;ONECUT1,2:-0.42547012987;NKX2-3_NKX2-5:-0.42629708561;PAX3,7:-0.434479764968;ELF1,2,4:-0.442610906968;FOSL2:-0.455460916448;SPI1:-0.465462671768;SREBF1,2:-0.465664301279;POU6F1:-0.484377737957;FOXN1:-0.489097507206;ETS1,2:-0.493550345636;RORA:-0.511390453018;NRF1:-0.521793949936;RBPJ:-0.556193753912;GFI1:-0.559018479287;ZFP161:-0.572641195137;HOXA9_MEIS1:-0.589313492134;FOXP1:-0.599082148307;SPIB:-0.634577162017;MYB:-0.650817710017;ATF2:-0.68558056051;FOXA2:-0.694105995994;POU2F1..3:-0.700021647676;PBX1:-0.705005077435;CUX2:-0.712971924193;PAX2:-0.728375800014;CDC5L:-0.756553950667;PITX1..3:-0.803505206286;ADNP_IRX_SIX_ZHX:-0.86880358408;GATA6:-0.88505097019;TLX2:-0.899051020635;FOXQ1:-0.9195730714;PDX1:-0.942616945128;CRX:-0.95341737437;BREu{core}:-0.954295103159;E2F1..5:-0.964914945027;FOXM1:-0.966192009841;SNAI1..3:-0.99226673594;ALX1:-0.99523678645;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.99565494363;POU1F1:-1.05431496433;NFY{A,B,C}:-1.06516377002;FOX{F1,F2,J1}:-1.07481903262;LMO2:-1.13885549929;SOX2:-1.15298368107;NANOG:-1.1810765651;POU5F1:-1.20949953159;EP300:-1.26689894255;ZEB1:-1.28955644521;OCT4_SOX2{dimer}:-1.29265179238;PAX6:-1.30921707725;SOX{8,9,10}:-1.46285137985;MYOD1:-1.57861093451;NR5A1,2:-1.68340747124;PPARG:-1.88360863137;VSX1,2:-2.00327298243 | ||
|xref= | |||
|zenbu_report=https://fantom.gsc.riken.jp/zenbu/reports/#miRNA_expression_atlas_human;search_select_hide=table111:FF:11504-119G1;search_select_hide=table117:FF:11504-119G1 | |||
}} | }} | ||
Latest revision as of 18:04, 4 June 2020
| Name: | Hair Follicle Outer Root Sheath Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs12339 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11 |
| CAGEd-oPOSSUM: | link |
| ZENBU report : | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
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| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12339
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs12339
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.695 |
| 10 | 10 | 0.059 |
| 100 | 100 | 0.62 |
| 101 | 101 | 0.723 |
| 102 | 102 | 0.0474 |
| 103 | 103 | 0.0941 |
| 104 | 104 | 0.404 |
| 105 | 105 | 0.35 |
| 106 | 106 | 0.119 |
| 107 | 107 | 0.202 |
| 108 | 108 | 0.31 |
| 109 | 109 | 0.237 |
| 11 | 11 | 0.893 |
| 110 | 110 | 0.404 |
| 111 | 111 | 0.777 |
| 112 | 112 | 0.363 |
| 113 | 113 | 0.164 |
| 114 | 114 | 0.0739 |
| 115 | 115 | 0.853 |
| 116 | 116 | 0.0337 |
| 117 | 117 | 0.202 |
| 118 | 118 | 0.927 |
| 119 | 119 | 0.79 |
| 12 | 12 | 0.337 |
| 120 | 120 | 0.199 |
| 121 | 121 | 0.448 |
| 122 | 122 | 0.00301 |
| 123 | 123 | 0.00275 |
| 124 | 124 | 0.617 |
| 125 | 125 | 0.988 |
| 126 | 126 | 0.699 |
| 127 | 127 | 0.841 |
| 128 | 128 | 0.112 |
| 129 | 129 | 0.37 |
| 13 | 13 | 0.994 |
| 130 | 130 | 0.853 |
| 131 | 131 | 0.86 |
| 132 | 132 | 0.23 |
| 133 | 133 | 0.897 |
| 134 | 134 | 0.581 |
| 135 | 135 | 0.848 |
| 136 | 136 | 0.396 |
| 137 | 137 | 0.109 |
| 138 | 138 | 0.972 |
| 139 | 139 | 0.514 |
| 14 | 14 | 0.377 |
| 140 | 140 | 0.426 |
| 141 | 141 | 0.508 |
| 142 | 142 | 0.859 |
| 143 | 143 | 0.882 |
| 144 | 144 | 0.226 |
| 145 | 145 | 0.324 |
| 146 | 146 | 0.969 |
| 147 | 147 | 0.259 |
| 148 | 148 | 0.395 |
| 149 | 149 | 0.0342 |
| 15 | 15 | 0.473 |
| 150 | 150 | 0.473 |
| 151 | 151 | 0.678 |
| 152 | 152 | 0.157 |
| 153 | 153 | 0.115 |
| 154 | 154 | 0.358 |
| 155 | 155 | 0.14 |
| 156 | 156 | 0.318 |
| 157 | 157 | 0.727 |
| 158 | 158 | 0.116 |
| 159 | 159 | 0.652 |
| 16 | 16 | 0.0358 |
| 160 | 160 | 0.122 |
| 161 | 161 | 0.538 |
| 162 | 162 | 0.357 |
| 163 | 163 | 0.396 |
| 164 | 164 | 0.0441 |
| 165 | 165 | 0.916 |
| 166 | 166 | 0.537 |
| 167 | 167 | 0.862 |
| 168 | 168 | 0.801 |
| 169 | 169 | 0.0363 |
| 17 | 17 | 0.492 |
| 18 | 18 | 0.343 |
| 19 | 19 | 0.0139 |
| 2 | 2 | 0.703 |
| 20 | 20 | 0.747 |
| 21 | 21 | 0.166 |
| 22 | 22 | 0.156 |
| 23 | 23 | 0.385 |
| 24 | 24 | 0.975 |
| 25 | 25 | 0.369 |
| 26 | 26 | 0.0165 |
| 27 | 27 | 0.551 |
| 28 | 28 | 0.238 |
| 29 | 29 | 0.0538 |
| 3 | 3 | 0.0454 |
| 30 | 30 | 0.796 |
| 31 | 31 | 0.947 |
| 32 | 32 | 8.45585e-8 |
| 33 | 33 | 0.272 |
| 34 | 34 | 0.438 |
| 35 | 35 | 0.522 |
| 36 | 36 | 0.66 |
| 37 | 37 | 0.0153 |
| 38 | 38 | 0.658 |
| 39 | 39 | 0.484 |
| 4 | 4 | 0.0376 |
| 40 | 40 | 0.477 |
| 41 | 41 | 0.564 |
| 42 | 42 | 0.663 |
| 43 | 43 | 0.474 |
| 44 | 44 | 0.734 |
| 45 | 45 | 0.49 |
| 46 | 46 | 0.0901 |
| 47 | 47 | 0.994 |
| 48 | 48 | 0.768 |
| 49 | 49 | 0.643 |
| 5 | 5 | 0.819 |
| 50 | 50 | 0.592 |
| 51 | 51 | 0.805 |
| 52 | 52 | 0.82 |
| 53 | 53 | 0.155 |
| 54 | 54 | 0.77 |
| 55 | 55 | 3.31546e-4 |
| 56 | 56 | 0.62 |
| 57 | 57 | 0.868 |
| 58 | 58 | 0.435 |
| 59 | 59 | 0.199 |
| 6 | 6 | 0.829 |
| 60 | 60 | 0.77 |
| 61 | 61 | 0.639 |
| 62 | 62 | 0.813 |
| 63 | 63 | 0.335 |
| 64 | 64 | 0.332 |
| 65 | 65 | 0.369 |
| 66 | 66 | 0.263 |
| 67 | 67 | 0.613 |
| 68 | 68 | 0.467 |
| 69 | 69 | 0.454 |
| 7 | 7 | 0.26 |
| 70 | 70 | 0.114 |
| 71 | 71 | 0.0742 |
| 72 | 72 | 0.872 |
| 73 | 73 | 0.0154 |
| 74 | 74 | 0.35 |
| 75 | 75 | 0.19 |
| 76 | 76 | 0.432 |
| 77 | 77 | 0.157 |
| 78 | 78 | 0.829 |
| 79 | 79 | 0.0464 |
| 8 | 8 | 0.238 |
| 80 | 80 | 0.139 |
| 81 | 81 | 0.939 |
| 82 | 82 | 0.651 |
| 83 | 83 | 0.525 |
| 84 | 84 | 0.111 |
| 85 | 85 | 0.0661 |
| 86 | 86 | 0.838 |
| 87 | 87 | 0.733 |
| 88 | 88 | 0.106 |
| 89 | 89 | 0.155 |
| 9 | 9 | 0.599 |
| 90 | 90 | 0.363 |
| 91 | 91 | 0.806 |
| 92 | 92 | 0.0373 |
| 93 | 93 | 0.146 |
| 94 | 94 | 0.458 |
| 95 | 95 | 0.126 |
| 96 | 96 | 0.951 |
| 97 | 97 | 0.991 |
| 98 | 98 | 0.58 |
| 99 | 99 | 0.00193 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs12339
FANTOM5 (FF) ontology
Direct parent terms
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000076 (squamous epithelial cell)
0000362 (epidermal cell)
0002159 (general ecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0002559 (hair follicle cell)
0002561 (outer root sheath cell)
UBERON: Anatomy
0000468 (multi-cellular organism)
0001003 (skin epidermis)
0002097 (skin of body)
0002199 (integument)
0002073 (hair follicle)
0000483 (epithelium)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0003102 (surface structure)
0007376 (outer epithelium)
0010371 (ecto-epithelium)
0010317 (germ layer / neural crest derived structure)
0005933 (hair root sheath)
0005942 (hair outer root sheath)
0002416 (integumental system)
0005932 (bulb of hair follicle)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000072 (human hair follicle cell sample)
0000001 (sample)
0000075 (human outer root sheath cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000221 (ectodermal cell)
