FFCP PHASE1:Mm9::chr10:59569082..59569112,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94214 | |EntrezGene=94214 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q9ER58 | |UniProt=Q9ER58 | ||
|association_with_transcript=77bp_to_NM_052994,uc007fek.1,uc007fel.1_5end | |association_with_transcript=77bp_to_NM_052994,uc007fek.1,uc007fel.1_5end | ||
|cluster_id=chr10:59569082..59569112,+ | |||
|description=CAGE_peak_5_at_Spock2_5end | |description=CAGE_peak_5_at_Spock2_5end | ||
|id=chr10:59569082..59569112,+ | |id=chr10:59569082..59569112,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.51e-10!23;CL:0000337!1.51e-10!23;CL:0000540!1.49e-09!33;CL:0000047!1.49e-09!33;CL:0000031!1.49e-09!33;CL:0000404!1.49e-09!33;CL:0000221!1.09e-07!44;CL:0000133!1.09e-07!44;CL:0002319!2.62e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-11,23;CL:0000337,4.02e-11,23;CL:0000540,1.27e-09,33;CL:0000047,1.27e-09,33;CL:0000031,1.27e-09,33;CL:0000404,1.27e-09,33;CL:0000221,5.75e-07,44;CL:0000133,5.75e-07,44;CL:0000393,7.82e-07,39;CL:0000211,7.82e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!1.36e-22!71;UBERON:0003075!1.36e-22!71;UBERON:0007284!1.36e-22!71;UBERON:0001017!1.53e-21!73;UBERON:0005743!1.53e-21!73;UBERON:0000073!2.16e-21!75;UBERON:0001016!2.16e-21!75;UBERON:0004121!2.46e-21!102;UBERON:0000924!2.46e-21!102;UBERON:0006601!2.46e-21!102;UBERON:0000033!2.37e-20!63;UBERON:0001049!1.44e-19!52;UBERON:0005068!1.44e-19!52;UBERON:0006241!1.44e-19!52;UBERON:0007135!1.44e-19!52;UBERON:0000955!2.55e-18!50;UBERON:0006238!2.55e-18!50;UBERON:0002616!8.61e-18!49;UBERON:0003056!1.81e-15!49;UBERON:0007811!2.25e-14!86;UBERON:0003080!9.32e-14!40;UBERON:0000153!2.12e-13!94;UBERON:0002020!3.80e-13!34;UBERON:0002780!3.87e-13!39;UBERON:0001890!3.87e-13!39;UBERON:0006240!3.87e-13!39;UBERON:0002791!3.75e-10!29;UBERON:0003528!3.75e-10!29;UBERON:0001893!3.75e-10!29;UBERON:0000468!9.44e-08!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-22,64;UBERON:0003075,2.49e-22,64;UBERON:0007284,2.49e-22,64;UBERON:0000073,1.04e-21,54;UBERON:0001017,1.54e-21,73;UBERON:0001016,4.97e-21,75;UBERON:0001049,4.02e-20,52;UBERON:0005068,4.02e-20,52;UBERON:0006241,4.02e-20,52;UBERON:0007135,4.02e-20,52;UBERON:0004121,9.46e-19,95;UBERON:0000924,9.46e-19,95;UBERON:0006601,9.46e-19,95;UBERON:0010371,1.11e-18,73;UBERON:0010314,2.70e-17,92;UBERON:0000955,1.41e-16,47;UBERON:0006238,1.41e-16,47;UBERON:0003056,4.67e-16,49;UBERON:0002616,4.93e-16,46;UBERON:0003080,3.14e-14,40;UBERON:0002780,1.41e-13,39;UBERON:0001890,1.41e-13,39;UBERON:0006240,1.41e-13,39;UBERON:0002020,1.45e-13,34;UBERON:0003528,2.11e-10,29;UBERON:0002791,2.11e-10,29;UBERON:0001893,2.11e-10,29;UBERON:0003076,9.90e-07,12;UBERON:0003057,9.90e-07,12 | |||
|phase1_expression=23.7020293715095,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0.893618560807968,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,3.12956537739216,0.65407546914134,1.09843091367236,0.777719596297134,0.979904951377538,2.87505128729943,0,1.45072428402269,0,0,0.573066879877513,4.64104883049698,13.5552028775931,18.5146842745212,14.5781222806421,1.0165335962074,0,0,0,0.7104801149461,0,1.15265491596466,3.62913643079672,3.37514845829227,3.15487442027073,46.2754594734162,37.3267834208227,2.69479758272899,3.1629005436018,2.75765635983006,66.0695285996332,89.8918860119721,84.6371998241901,14.1118327871307,15.7358746996145,14.0646610050325,59.4659787872941,47.2720592426611,52.1042024918922,31.2306300602088,29.043822883017,20.1311401491325,0.908714319998209,4.30757892608677,1.44932244350839,0,0,0,0,0,1.82577746171277,0,0,0,15.3519327556582,0,0,0,0,0,0,2.8545969929765,0,4.45326417194474,2.77576522825817,3.95805121805784,3.92046345335299,4.6724018571313,6.34979018532806,1.63366568728578,1.48316980640624,0.722996784599558,0,0.485300549842228,0.883366073841574,0.969750506270444,0,24.3008061519584,42.5176814831314,0.766371165625774,0,0,0,35.6501721783478,13.2675174817402,6.78533501409468,14.9488915365358,15.8543583544805,50.076918738854,31.1503225090095,5.39748628406676,1.8661045591514,0.758168275301024,3.36706969418358,2.47228841629137,3.21862946206862,4.32149111532838,5.12396380641431,6.46346741937615,4.99643509110914,6.8402258928602,11.9003550539947,0.862271971731369,1.89106080167819,1.93546236580344,1.09597866213787,2.22437799380478,4.52727816478817,1.4404749548556,0.796137067273973,0,0,0,0.828503090142008,0,0.180062061461015,0.473489471170421,1.18058539048442,0.925602677324269,1.86027155800326,1.87791380979733,3.97002164048376,1.31647879930784,0.820837320395476,1.37816976227955,2.63159977365598,0.658650345873152,2.41571553768669,18.2952255250791,10.0846520131699,0,0,1.2797295032114,0.928946687441754,0.902072229254653,0.80673409849337,0.444756087689741,0.760902504450237,0,0.988193728344065,1.00534083520108,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,10.4317345524195,7.65465034485183,5.63538678365402,7.94240178596726,5.81857461502877,7.01358198903186,0.822074982615345,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.863088412352432,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,15.1497615936616,1.32643988239339,0,1.01847051465113,0.469380496577004,4.85768146581266,13.5684875305028,19.1230974900643,14.1871629695572,17.4957104822532,21.0480294627883,13.4367918066905,20.2041428783098,19.6722719670856,0,0,0.491764273019036,0,35.8027815672776,35.5151410374376,0,3.53459298086122,2.83957397474631,2.73307121007647,5.17016154558717,0.238968797952552,0.891194696329576,1.13230612315533,2.83367491172426,2.92255857911312,3.16230222357219,16.3873871375122,6.67118400478862,3.38324646967785,5.37526965866801,5.44401405809367,0,1.69946445308487,2.11626489875326,0.754420319023592,1.77181135728464,1.53717573971964,3.35956781118687,2.54473610634254,2.13898427030833,1.8962205476149,1.05418608574999,0,16.3411010761818,1.26042765821917,3.10460841078611,3.42939256050548,4.78818630834139,12.664186049747,13.657568709976,20.7036165397928,0,0,1.98475558249466,0.65954501176592,1.45317984026315,0.844380948994182,0.477489376012546,0.328281799490123,1.7488850197791,46.3563255026274,0.170870880797853,2.06386867963222,0.740778109478847,0,0.27338845544205,0,0,0.419854356970974,0.552799895217695,0,0.316335993581135,0.813277868507395,1.29606408986162,1.04544148007234,1.52853794622324,0.674321731924103,0.909188012978695,1.04702376793612,1.03691978633434,1.24267862617385,5.6369293868419,3.43888055901151,5.79104716599842,9.13920585217024,11.1077448190849,14.0233584157346,17.1341568422801,21.6139278840957,19.6086974076079,11.3544536788223,7.20075015644664,3.79213344753814,10.9471616256689,10.1683847593179,8.70469513951227,6.08690765269437,3.57626438606277,3.36547258655913,2.36303243479324,1.61546319917036,2.97206545954499,0.907435666231565,1.75424185331554,1.44317762460494,1.5193997283604,0.453460767230423,0.221985953374065,0.0897138566094757,0.335769232728157,1.9318959403219,2.25218970541418,2.38097111547445,0.428736758158132,2.00628841614145,17.5073071211291,15.1907328047368,17.7597609166213,16.8416118696814,21.2375581128899,15.8632718451837,15.5255175053315,21.1650965515384,14.5005570874945,17.0860902878101,0.93408612825759,4.38927360741134,1.70733605754134,3.40349403895612,1.04806581313991,2.02227859295016,1.77797382241292,2.88449080134452,3.85103051510178,2.52697211763797,4.05566879824384,3.39527414494937,3.37109426891577,4.03358460150676,3.0440798546475,2.85776214769844,4.86714168968393,4.43691207066522,3.70877310722976,5.15196220470391,5.82877729055206,3.19456451086807,4.29185141905178,3.63366041580821,4.23492211868988,3.63842813934209,3.29270351170991,2.36762740294059,3.12349461845482,2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|phase1_expression=23.7020293715095,0,0,0,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1201515279773,0.893618560807968,0.522399578277871,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183546752161682,3.12956537739216,0.65407546914134,1.09843091367236,0.777719596297134,0.979904951377538,2.87505128729943,0,1.45072428402269,0,0,0.573066879877513,4.64104883049698,13.5552028775931,18.5146842745212,14.5781222806421,1.0165335962074,0,0,0,0.7104801149461,0,1.15265491596466,3.62913643079672,3.37514845829227,3.15487442027073,46.2754594734162,37.3267834208227,2.69479758272899,3.1629005436018,2.75765635983006,66.0695285996332,89.8918860119721,84.6371998241901,14.1118327871307,15.7358746996145,14.0646610050325,59.4659787872941,47.2720592426611,52.1042024918922,31.2306300602088,29.043822883017,20.1311401491325,0.908714319998209,4.30757892608677,1.44932244350839,0,0,0,0,0,1.82577746171277,0,0,0,15.3519327556582,0,0,0,0,0,0,2.8545969929765,0,4.45326417194474,2.77576522825817,3.95805121805784,3.92046345335299,4.6724018571313,6.34979018532806,1.63366568728578,1.48316980640624,0.722996784599558,0,0.485300549842228,0.883366073841574,0.969750506270444,0,24.3008061519584,42.5176814831314,0.766371165625774,0,0,0,35.6501721783478,13.2675174817402,6.78533501409468,14.9488915365358,15.8543583544805,50.076918738854,31.1503225090095,5.39748628406676,1.8661045591514,0.758168275301024,3.36706969418358,2.47228841629137,3.21862946206862,4.32149111532838,5.12396380641431,6.46346741937615,4.99643509110914,6.8402258928602,11.9003550539947,0.862271971731369,1.89106080167819,1.93546236580344,1.09597866213787,2.22437799380478,4.52727816478817,1.4404749548556,0.796137067273973,0,0,0,0.828503090142008,0,0.180062061461015,0.473489471170421,1.18058539048442,0.925602677324269,1.86027155800326,1.87791380979733,3.97002164048376,1.31647879930784,0.820837320395476,1.37816976227955,2.63159977365598,0.658650345873152,2.41571553768669,18.2952255250791,10.0846520131699,0,0,1.2797295032114,0.928946687441754,0.902072229254653,0.80673409849337,0.444756087689741,0.760902504450237,0,0.988193728344065,1.00534083520108,1.39269530428806,1.36474860983384,0,0.216138049874694,0.597423819763102,10.4317345524195,7.65465034485183,5.63538678365402,7.94240178596726,5.81857461502877,7.01358198903186,0.822074982615345,0.590440591918409,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.863088412352432,0.162135226775035,0,0,0.744281895337007,0,0,0.179397413521912,0,15.1497615936616,1.32643988239339,0,1.01847051465113,0.469380496577004,4.85768146581266,13.5684875305028,19.1230974900643,14.1871629695572,17.4957104822532,21.0480294627883,13.4367918066905,20.2041428783098,19.6722719670856,0,0,0.491764273019036,0,35.8027815672776,35.5151410374376,0,3.53459298086122,2.83957397474631,2.73307121007647,5.17016154558717,0.238968797952552,0.891194696329576,1.13230612315533,2.83367491172426,2.92255857911312,3.16230222357219,16.3873871375122,6.67118400478862,3.38324646967785,5.37526965866801,5.44401405809367,0,1.69946445308487,2.11626489875326,0.754420319023592,1.77181135728464,1.53717573971964,3.35956781118687,2.54473610634254,2.13898427030833,1.8962205476149,1.05418608574999,0,16.3411010761818,1.26042765821917,3.10460841078611,3.42939256050548,4.78818630834139,12.664186049747,13.657568709976,20.7036165397928,0,0,1.98475558249466,0.65954501176592,1.45317984026315,0.844380948994182,0.477489376012546,0.328281799490123,1.7488850197791,46.3563255026274,0.170870880797853,2.06386867963222,0.740778109478847,0,0.27338845544205,0,0,0.419854356970974,0.552799895217695,0,0.316335993581135,0.813277868507395,1.29606408986162,1.04544148007234,1.52853794622324,0.674321731924103,0.909188012978695,1.04702376793612,1.03691978633434,1.24267862617385,5.6369293868419,3.43888055901151,5.79104716599842,9.13920585217024,11.1077448190849,14.0233584157346,17.1341568422801,21.6139278840957,19.6086974076079,11.3544536788223,7.20075015644664,3.79213344753814,10.9471616256689,10.1683847593179,8.70469513951227,6.08690765269437,3.57626438606277,3.36547258655913,2.36303243479324,1.61546319917036,2.97206545954499,0.907435666231565,1.75424185331554,1.44317762460494,1.5193997283604,0.453460767230423,0.221985953374065,0.0897138566094757,0.335769232728157,1.9318959403219,2.25218970541418,2.38097111547445,0.428736758158132,2.00628841614145,17.5073071211291,15.1907328047368,17.7597609166213,16.8416118696814,21.2375581128899,15.8632718451837,15.5255175053315,21.1650965515384,14.5005570874945,17.0860902878101,0.93408612825759,4.38927360741134,1.70733605754134,3.40349403895612,1.04806581313991,2.02227859295016,1.77797382241292,2.88449080134452,3.85103051510178,2.52697211763797,4.05566879824384,3.39527414494937,3.37109426891577,4.03358460150676,3.0440798546475,2.85776214769844,4.86714168968393,4.43691207066522,3.70877310722976,5.15196220470391,5.82877729055206,3.19456451086807,4.29185141905178,3.63366041580821,4.23492211868988,3.63842813934209,3.29270351170991,2.36762740294059,3.12349461845482,2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| ||
|short_description=p5@Spock2 | |short_description=p5@Spock2 | ||
}} | }} |
Latest revision as of 03:06, 26 September 2015
Short description: | p5@Spock2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Spock2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 77bp_to_NM_052994, uc007fek.1, uc007fel.1_5end |
EntrezGene: | Spock2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.02e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.02e-11 | 23 |
neuron | 1.27e-09 | 33 |
neuronal stem cell | 1.27e-09 | 33 |
neuroblast | 1.27e-09 | 33 |
electrically signaling cell | 1.27e-09 | 33 |
ectodermal cell | 5.75e-07 | 44 |
neurectodermal cell | 5.75e-07 | 44 |
electrically responsive cell | 7.82e-07 | 39 |
electrically active cell | 7.82e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 2.49e-22 | 64 |
neural plate | 2.49e-22 | 64 |
presumptive neural plate | 2.49e-22 | 64 |
regional part of nervous system | 1.04e-21 | 54 |
central nervous system | 1.54e-21 | 73 |
nervous system | 4.97e-21 | 75 |
neural tube | 4.02e-20 | 52 |
neural rod | 4.02e-20 | 52 |
future spinal cord | 4.02e-20 | 52 |
neural keel | 4.02e-20 | 52 |
ectoderm-derived structure | 9.46e-19 | 95 |
ectoderm | 9.46e-19 | 95 |
presumptive ectoderm | 9.46e-19 | 95 |
ecto-epithelium | 1.11e-18 | 73 |
structure with developmental contribution from neural crest | 2.70e-17 | 92 |
brain | 1.41e-16 | 47 |
future brain | 1.41e-16 | 47 |
pre-chordal neural plate | 4.67e-16 | 49 |
regional part of brain | 4.93e-16 | 46 |
anterior neural tube | 3.14e-14 | 40 |
regional part of forebrain | 1.41e-13 | 39 |
forebrain | 1.41e-13 | 39 |
future forebrain | 1.41e-13 | 39 |
gray matter | 1.45e-13 | 34 |
brain grey matter | 2.11e-10 | 29 |
regional part of telencephalon | 2.11e-10 | 29 |
telencephalon | 2.11e-10 | 29 |
posterior neural tube | 9.90e-07 | 12 |
chordal neural plate | 9.90e-07 | 12 |