FFCP PHASE1:Mm9::chr10:42894383..42894386,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109205 | |EntrezGene=109205 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q0P5V2 | |UniProt=Q0P5V2 | ||
|association_with_transcript=-47bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end | |association_with_transcript=-47bp_to_ENSMUST00000040275,NM_175407,uc007ezf.1,uc007ezg.1_5end | ||
|cluster_id=chr10:42894383..42894386,- | |||
|description=CAGE_peak_5_at_Sobp_5end | |description=CAGE_peak_5_at_Sobp_5end | ||
|id=chr10:42894383..42894386,- | |id=chr10:42894383..42894386,- | ||
|ontology_enrichment_celltype=CL:0000117!3.42e-12!23;CL:0000337!3.42e-12!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0000393!4.89e-07!39;CL:0000211!4.89e-07!39 | |ontology_enrichment_celltype=CL:0000117!3.42e-12!23;CL:0000337!3.42e-12!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0000393!4.89e-07!39;CL:0000211!4.89e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.54e-12,23;CL:0000337,7.54e-12,23;CL:0002608,8.56e-10,3;CL:0002609,1.97e-08,6;CL:0000540,1.07e-07,33;CL:0000047,1.07e-07,33;CL:0000031,1.07e-07,33;CL:0000404,1.07e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000033!7.40e-23!63;UBERON:0001049!1.43e-21!52;UBERON:0005068!1.43e-21!52;UBERON:0006241!1.43e-21!52;UBERON:0007135!1.43e-21!52;UBERON:0002346!1.99e-21!71;UBERON:0003075!1.99e-21!71;UBERON:0007284!1.99e-21!71;UBERON:0000955!3.69e-21!50;UBERON:0006238!3.69e-21!50;UBERON:0002616!2.31e-20!49;UBERON:0004121!4.95e-20!102;UBERON:0000924!4.95e-20!102;UBERON:0006601!4.95e-20!102;UBERON:0001017!5.49e-20!73;UBERON:0005743!5.49e-20!73;UBERON:0000073!3.69e-19!75;UBERON:0001016!3.69e-19!75;UBERON:0003056!5.61e-19!49;UBERON:0002020!6.85e-18!34;UBERON:0003080!1.15e-17!40;UBERON:0002780!4.29e-17!39;UBERON:0001890!4.29e-17!39;UBERON:0006240!4.29e-17!39;UBERON:0002791!1.52e-15!29;UBERON:0003528!1.52e-15!29;UBERON:0001893!1.52e-15!29;UBERON:0000956!3.15e-11!21;UBERON:0001869!3.15e-11!21;UBERON:0000203!3.15e-11!21;UBERON:0000153!4.84e-11!94;UBERON:0007811!9.41e-11!86;UBERON:0002619!7.34e-09!17;UBERON:0002021!4.23e-07!10;UBERON:0000411!4.23e-07!10;UBERON:0001950!4.23e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,2.96e-18,29;UBERON:0002791,2.96e-18,29;UBERON:0001893,2.96e-18,29;UBERON:0002020,1.32e-17,34;UBERON:0000956,5.82e-16,21;UBERON:0001869,5.82e-16,21;UBERON:0000203,5.82e-16,21;UBERON:0000955,1.53e-15,47;UBERON:0006238,1.53e-15,47;UBERON:0002780,9.92e-15,39;UBERON:0001890,9.92e-15,39;UBERON:0006240,9.92e-15,39;UBERON:0000073,1.02e-14,54;UBERON:0001017,1.92e-14,73;UBERON:0003080,2.78e-14,40;UBERON:0001016,6.11e-14,75;UBERON:0002616,7.76e-14,46;UBERON:0001049,1.24e-13,52;UBERON:0005068,1.24e-13,52;UBERON:0006241,1.24e-13,52;UBERON:0007135,1.24e-13,52;UBERON:0002619,1.94e-13,17;UBERON:0003056,4.43e-11,49;UBERON:0002346,2.11e-10,64;UBERON:0003075,2.11e-10,64;UBERON:0007284,2.11e-10,64;UBERON:0004121,4.46e-10,95;UBERON:0000924,4.46e-10,95;UBERON:0006601,4.46e-10,95;UBERON:0010371,1.11e-08,73;UBERON:0002021,6.39e-08,10;UBERON:0000411,6.39e-08,10;UBERON:0001950,6.39e-08,10;UBERON:0010314,4.54e-07,92;UBERON:0001954,5.50e-07,7;UBERON:0003022,5.50e-07,7;UBERON:0002421,5.50e-07,7;UBERON:0000349,5.50e-07,7;UBERON:0002600,5.50e-07,7 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.933206510776299,1.62007125998029,0.630974884054146,1.71390590642282,0.441737081903227,1.5923803897944,1.0543001812006,1.83843757322004,1.10115880999389,0.893811366596314,0.614426133024974,2.37395317914349,2.10421580285542,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0,0,0.150722640552623,0,0.628332956648377,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0.878342391034642,1.25668024088073,0,0,0,0,0.898743836428936,0.915001205637253,1.00523481690292,1.39059456153821,1.02286182932132,0.20778804455956,0.486723789203273,0,0,0,0.420883711772948,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0.189106080167819,0.527853372491847,0,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,1.05389452409612,0.292399974850665,0.439100230582101,0.134206418760372,1.05144974282064,0.92614151141356,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0.481651769963376,0.820481806145422,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,2.57057053137446,1.41940085208269,0.35613120733451,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0.32977250588296,0.322928853391811,0.180938774784468,0,0.328281799490123,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,1.15345278868282,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,1.12950368523413,0.920650473014354,1.71868654031819,0.515559547031063,2.74033007908257,3.0215755895588,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0.415149390336707,1.59609949360412,1.36586884603307,1.21553358534147,0.628839487883947,0.735374033800057,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.704276676453562,0.804096565378586,0.476293691283074,1.0429589335037,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0,0.814824683075171,0,0.711810108745045,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0.194429899074283,0.279972843250725,0,0,0,0,0,0.286533439938757,0.515672092277442,1.21389876515759,2.11596391708813,0,0,0.889294796111139,0,0,0,0,0.384218305321555,0.933206510776299,1.62007125998029,0.630974884054146,1.71390590642282,0.441737081903227,1.5923803897944,1.0543001812006,1.83843757322004,1.10115880999389,0.893811366596314,0.614426133024974,2.37395317914349,2.10421580285542,0.52091337055676,0.558365998002762,0.56276261003168,0.916789486660861,0.883885756421003,0.569486723196412,0.745597783301202,0,0.151143120213571,0,0,0,0,0,0,0.421333260395256,0,0.259786004602869,0,0.281686839553361,0,0,0,0,0,0,0,0,0.593768556259299,0.346970653532272,0,0,0.150722640552623,0,0.628332956648377,0,0.144599356919912,0,0.808834249737046,0.220841518460394,0.484875253135222,0,0.878342391034642,1.25668024088073,0,0,0,0,0.898743836428936,0.915001205637253,1.00523481690292,1.39059456153821,1.02286182932132,0.20778804455956,0.486723789203273,0,0,0,0.420883711772948,0.520481771850815,0.459804208866946,0.540186389416048,0.452114453507145,0.340182495756639,0.2562274405697,0.281105173679186,0.258703370739016,0.862271971731369,0.189106080167819,0.527853372491847,0,0.556094498451196,0,0.823128545631774,0.199034266818493,0,0,0,0,0.469052119962192,0,0.473489471170421,0.196764231747404,0.462801338662135,0,0.268273401399619,0.467061369468678,0.493679549740441,0.492502392237286,1.05389452409612,0.292399974850665,0.439100230582101,0.134206418760372,1.05144974282064,0.92614151141356,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0,0.379335801906163,0.228497025219458,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0.162964976442026,0,0,0,0,0,0.315270288212382,0,0.159454768657487,0,0.172684981865896,0,0,0,0,0.551873492609465,0.481651769963376,0.820481806145422,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0.222798674082394,0,0,0,0.395287777946524,2.57057053137446,1.41940085208269,0.35613120733451,0,1.15479086080775,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,1.02131881726136,0.36012218806262,0.129358683782755,0.428674070063185,0.532020700926821,0.356737635204141,0.329098041204242,0.913394847343798,0,0.21183207086382,0,0.32977250588296,0.322928853391811,0.180938774784468,0,0.328281799490123,0.291480836629851,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0,0.209088296014469,0.218362563746178,0.269728692769641,0.165306911450672,0,0,0.621339313086926,0,0.299033092087958,0.496375471371293,0.194451188344048,0.387479470433193,0.337912250981556,0.352071715937262,0.2604087696879,1.15345278868282,0.483168241652012,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.214368379079066,0,1.12950368523413,0.920650473014354,1.71868654031819,0.515559547031063,2.74033007908257,3.0215755895588,0.675022500231806,1.80128481289688,0.906284817968409,0.51776031175182,0.415149390336707,1.59609949360412,1.36586884603307,1.21553358534147,0.628839487883947,0.735374033800057,0.222246727801615,0.206035057238894,0.320919209591815,0.505394423527595,0.25347929989024,0.188626341386076,0.280924522409647,0.704276676453562,0.804096565378586,0.476293691283074,1.0429589335037,0.192909220463705,0,0.147198920134397,0,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.365855945745545,0,0.814824683075171,0,0.711810108745045,0.492522411877817,0.409231043169689,0.464810523557898,0.578719832943424,0.499621155875892,0.467863216890817,0.429742108096597,0.57386499620653,0.441182838239031,0.463735671240843 | ||
|short_description=p5@Sobp | |short_description=p5@Sobp | ||
}} | }} |
Latest revision as of 00:50, 26 September 2015
Short description: | p5@Sobp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Sobp_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -47bp_to_ENSMUST00000040275, NM_175407, uc007ezf.1, uc007ezg.1_5end |
EntrezGene: | Sobp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.54e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.54e-12 | 23 |
hippocampal neuron | 8.56e-10 | 3 |
neuron of cerebral cortex | 1.97e-08 | 6 |
neuron | 1.07e-07 | 33 |
neuronal stem cell | 1.07e-07 | 33 |
neuroblast | 1.07e-07 | 33 |
electrically signaling cell | 1.07e-07 | 33 |