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FFCP PHASE1:Mm9::chr18:3382977..3383063,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71745
|EntrezGene=71745
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=Q9D4H8
|UniProt=Q9D4H8
|association_with_transcript=0bp_to_ENSMUST00000025073,uc008dxz.2_5end
|association_with_transcript=0bp_to_ENSMUST00000025073,uc008dxz.2_5end
|cluster_id=chr18:3382977..3383063,+
|description=CAGE_peak_2_at_Cul2_5end
|description=CAGE_peak_2_at_Cul2_5end
|id=chr18:3382977..3383063,+
|id=chr18:3382977..3383063,+
|ontology_enrichment_celltype=CL:0000540!1.41e-09!33;CL:0000047!1.41e-09!33;CL:0000031!1.41e-09!33;CL:0000404!1.41e-09!33;CL:0000117!5.09e-08!23;CL:0000337!5.09e-08!23
|ontology_enrichment_celltype_v019_2=CL:0000540,1.41e-09,33;CL:0000047,1.41e-09,33;CL:0000031,1.41e-09,33;CL:0000404,1.41e-09,33;CL:0000117,5.09e-08,23;CL:0000337,5.09e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!7.00e-13!75;UBERON:0001016!7.00e-13!75;UBERON:0001017!1.43e-12!73;UBERON:0005743!1.43e-12!73;UBERON:0002346!2.58e-12!71;UBERON:0003075!2.58e-12!71;UBERON:0007284!2.58e-12!71;UBERON:0002020!3.60e-12!34;UBERON:0004121!1.64e-11!102;UBERON:0000924!1.64e-11!102;UBERON:0006601!1.64e-11!102;UBERON:0001049!2.36e-11!52;UBERON:0005068!2.36e-11!52;UBERON:0006241!2.36e-11!52;UBERON:0007135!2.36e-11!52;UBERON:0000033!5.64e-11!63;UBERON:0000955!1.55e-10!50;UBERON:0006238!1.55e-10!50;UBERON:0002616!4.75e-10!49;UBERON:0002791!1.57e-09!29;UBERON:0003528!1.57e-09!29;UBERON:0001893!1.57e-09!29;UBERON:0003056!6.74e-09!49;UBERON:0003080!5.36e-08!40;UBERON:0002021!1.47e-07!10;UBERON:0000411!1.47e-07!10;UBERON:0001950!1.47e-07!10;UBERON:0002780!1.68e-07!39;UBERON:0001890!1.68e-07!39;UBERON:0006240!1.68e-07!39
|ontology_enrichment_uberon_v019_2=UBERON:0002346,6.21e-13,64;UBERON:0003075,6.21e-13,64;UBERON:0007284,6.21e-13,64;UBERON:0001016,7.26e-13,75;UBERON:0001017,1.48e-12,73;UBERON:0000073,1.65e-12,54;UBERON:0002020,3.74e-12,34;UBERON:0004121,9.55e-12,95;UBERON:0000924,9.55e-12,95;UBERON:0006601,9.55e-12,95;UBERON:0001049,2.43e-11,52;UBERON:0005068,2.43e-11,52;UBERON:0006241,2.43e-11,52;UBERON:0007135,2.43e-11,52;UBERON:0010314,8.33e-11,92;UBERON:0010371,1.05e-10,73;UBERON:0003528,1.63e-09,29;UBERON:0002791,1.63e-09,29;UBERON:0001893,1.63e-09,29;UBERON:0000955,6.38e-09,47;UBERON:0006238,6.38e-09,47;UBERON:0003056,6.92e-09,49;UBERON:0002616,1.85e-08,46;UBERON:0003080,5.51e-08,40;UBERON:0002021,1.47e-07,10;UBERON:0000411,1.47e-07,10;UBERON:0001950,1.47e-07,10;UBERON:0002780,1.72e-07,39;UBERON:0001890,1.72e-07,39;UBERON:0006240,1.72e-07,39
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|phase1_expression=7.20669811971573,1.74487703819681,4.09499315450582,2.11724947914781,3.50627010962443,2.68606835059024,3.73780224952841,2.7115897922731,10.98152032783,13.3416780003536,3.08192342805909,3.35043067780413,4.28001824828014,4.98296293788285,3.33109761815663,6.2767332890846,4.89693314689703,3.15462165358238,3.15363197293199,4.66828616977833,4.16712121740242,3.67376519443276,4.70159620450084,3.19984845586813,3.89995777814189,1.72269589234506,3.4460959692726,3.23206849028834,3.04037471130198,8.82105454159758,3.76941868114018,5.08024538767705,3.69038872550742,0,4.04392267651784,3.98963148860382,3.67504841272264,2.92972141515835,3.1253413780952,4.18818995179039,4.1176204162171,4.09827290975067,2.42755176515577,3.14742044938943,2.02753862439029,3.12029478674859,1.56478268869608,2.8343270329458,0.878744730937887,2.13872888981712,0.699932108126813,1.43752564364972,11.0736519998106,13.0565185562042,8.4023449785616,4.3734104126111,4.01146815914259,4.12537673821954,9.1042407386819,8.99284664762456,3.80298842103708,0.338844532069132,1.77858959222228,0.449949858640699,0,0.7104801149461,0.599200221036809,1.92109152660777,7.25827286159344,4.59020190327748,5.8890989178387,10.8547374073445,8.83474163806454,6.98197555525238,5.36734637702124,6.43453150627015,23.1243350098716,15.1947932321373,15.9750794586493,7.64940468835124,8.96578907303615,10.939180781692,9.49222196604695,15.757353080887,14.3630352910202,19.4454866412621,15.233769845504,14.3527573285481,5.90664307998836,7.55715601067855,2.89864488701678,7.74381489283248,4.0798280022465,6.47643829965381,14.2950811838487,8.06448396775204,6.03911006566533,4.26075806445144,2.07828803682295,4.24007489412408,5.49289337129054,1.28326477414318,2.54805239706646,7.11066703153331,6.27824018932521,4.56047757855178,7.58286667522175,4.11061966988616,4.14300613835475,3.85949561568544,4.3371331691534,4.56698217468212,6.91846491768175,7.23468674652588,7.64326596382081,4.14699751387929,10.1349936771093,2.60278842455841,4.42305275974937,5.3383060482645,3.97514733228708,5.33362778448744,1.86391761218122,11.7112318804619,11.9384622883669,3.32094171771169,4.19352935770721,5.99902730993408,4.95573885584952,15.5782264981016,10.0650132620098,12.1884721549478,14.2535942557667,16.1100738118108,10.389402227978,17.8465389374533,5.70300437561771,4.47865094196335,1.51633655060205,3.99839526184301,8.84819012146385,8.04657365517155,5.58192602396583,6.93242162044289,7.89223390155403,8.58361925908494,6.46541899462129,4.65666067330228,5.6047678162539,7.75334928688059,7.74184946321375,5.91828477554452,5.83899223373756,4.87553033131033,6.37924622864625,5.37392520409932,5.61770549850588,6.94839349209731,5.11494298912067,7.87077935634907,5.39409937956521,5.22179978236943,5.44512891845984,6.09969118416952,7.40482141859416,6.51095045301142,3.75582761959467,6.07179780309281,5.9241545968853,6.23836363500562,4.53985333456792,3.80119967305864,3.29325172936576,4.16039898157152,9.88362758251398,14.5095503454791,4.95628174475697,3.17340679996253,5.54549451391608,7.19933682767359,4.63922860759536,5.04208811558356,4.89231696458715,7.79925067061493,2.37264530772256,5.10566759644434,4.27269854960458,6.36660710531683,4.28920991662064,6.29173586057955,3.8904848977445,3.38540164532424,2.65535061334314,7.08340778180319,7.88954149711563,7.33144780243131,5.62462212786115,6.87331034925122,4.42655759869801,3.83786384746966,3.767969468193,4.81248939295022,6.22550516883013,6.50695912292767,5.70021085828289,5.62155280962134,3.04290182082754,3.85883455603867,6.11102044275408,3.16465751195892,3.56697498905078,8.78596522201861,4.31304619582064,5.58211421502755,4.99260276983297,5.05157755894223,8.25228102200796,7.71909634181387,1.29327233116623,7.01118223550794,7.49638891633319,5.43184274480602,5.16318546234705,5.69521275302174,5.47500374037832,4.48807390072937,5.51723004371669,5.09368786192182,3.82691444777969,2.78567635016755,2.24490476425664,3.03763023021174,9.04747703635634,3.26343410291226,2.45882136509518,5.79467167239938,14.7706542788769,17.3473296156461,3.27869890753351,10.0988370881749,8.20321370482267,5.0757036758563,9.90947629570875,8.12493913038677,6.23836287430704,5.66153061577665,6.8817819284732,8.47541987942804,6.7198922250909,13.8168166061377,3.40656204499845,3.02711526234334,4.72372182125371,3.95928295134085,1.32745138339963,4.12727081463468,4.83717691143602,3.20628635585027,0.885905678642318,3.99665692327106,2.58428293168221,2.90826983582004,2.85197902707777,3.47640433729398,1.05418608574999,2.06271086496374,3.74483566329167,5.76195500900193,2.58717367565509,5.14408884075822,4.96552654198366,4.99432689285798,5.43011767986999,2.43571959291679,3.28540391289194,4.02480934641258,2.8668691747145,2.96795255294664,4.68246837418126,5.54878909339034,3.81991500810037,3.93938159388147,6.12109756922687,15.0194494628513,1.87957968877638,2.68302928352189,4.44466865687308,4.33247451110789,3.69074414846768,3.88922894451088,4.24946074984638,4.05859211738608,5.52799895217695,3.81868247206045,7.59206384594725,4.26970880966382,6.80433647177348,6.06356058441959,5.24070152990826,5.25970950900801,4.95920734352016,2.35580347785627,6.09190374471426,0.621339313086926,3.38215763210514,7.32631075615496,8.93475848468327,9.72255941720238,6.07051170345336,6.58928889414035,6.45464812551647,8.07267186032491,6.8158573876712,7.24752362478018,4.89651010638371,3.47612232690996,3.24360344464263,4.31386020092274,4.80707045017842,4.29664069601955,3.77494574084403,3.12508168751919,4.72606486958647,4.64445669761479,3.96275394605999,4.53717833115782,4.97035191772737,3.94468550725351,5.2594605981706,6.57518112484113,6.21560669447381,11.3936597894034,6.71538465456314,2.12508553435409,3.19060208267009,3.84618410961257,3.21552568618599,1.50471631210609,19.7663144915973,17.0320337507655,20.0513429703789,19.0757032401493,17.1270629942661,13.5970901530146,14.8504950050997,10.3573876741571,16.3131267234314,12.9440077937955,8.30298780673413,11.5717213286299,7.85374586469017,6.80698807791223,6.07878171621149,2.94149613520023,6.00066165064361,4.73880631649457,4.49286893428541,5.81203587056734,7.09742039692671,7.54505365544305,5.80577346313271,5.8262888688431,6.83482080571798,7.1444053692461,7.41659686047075,7.33055037762079,7.41754621445952,6.62395140604788,7.88599280486455,6.74408063405482,6.19934093863034,6.39524233182245,7.43464105281112,6.43071019976741,8.59761472502031,8.15516105457313,6.65440157844723,5.05028044491965,5.81311588808453,6.69830480153832,2.86461730218783,8.6764631064141,7.13754460630223,3.99696924700713,6.08222181958062,5.37177635120746,5.54736162999646,2.42650561031467,6.4922993973718
|short_description=p2@Cul2
|short_description=p2@Cul2
}}
}}

Latest revision as of 03:59, 27 September 2015

Short description:p2@Cul2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cul2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000025073, uc008dxz.2_5end
EntrezGene:Cul2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cul2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G77.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.09
CD326+ enterocyte, pool1.CNhs13542.11848-124I32.12
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.74
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.98
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F213.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E63.08
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F13.35
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E44.28
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E84.98
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A36.28
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A54.90
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A64.67
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H23.67
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.70
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.20
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.90
GP2+ M cell, pool1.CNhs13228.11845-124H91.72
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I23.23
Ileum epithelium, pool1.CNhs13199.10252-104B93.04
Ileum epithelium, pool2.CNhs13232.10253-104C18.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F54.04
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.99
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.68
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H24.10
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.43
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A211.07
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I913.06
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A18.40
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C14.37
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E14.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.92
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D57.26
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.59
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F110.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D58.83
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D26.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.37
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D323.12
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F315.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.98
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D47.65
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F48.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D810.94
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E49.49
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I614.36
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D619.45
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F615.23
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.35
Mouse Schwann, donor1.CNhs12507.11728-123D95.91
Mouse Schwann, donor2.CNhs12573.11746-123F97.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F77.74
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C86.48
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F68.06
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I74.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I84.24
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.49
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.28
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.56
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G37.58
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.11
accessory axillary lymph node, adult.CNhs10475.1063-29H94.14
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F57.23
adrenal gland, neonate N00.CNhs11191.1311-23C17.64
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A810.13
aorta, adult.CNhs10498.46-23H12.60
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F55.34
bone (os femoris), neonate N16.CNhs11225.1525-43A63.98
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B211.71
cerebellum, neonate N30.CNhs11135.1395-42I211.94
colon, adult.CNhs10468.36-18H73.32
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.19
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D16.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A415.58
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F112.19
cortex, adult.CNhs10473.12-14D514.25
cortex, neonate N30.CNhs11107.1392-42F216.11
diencephalon, adult.CNhs10482.20-12F210.39
diencephalon, neonate N30.CNhs11201.1388-42B217.85
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.70
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B21.52
eyeball, adult.CNhs10484.31-12G44.00
eyeball, embryo E12.CNhs11016.345-16C68.85
eyeball, embryo E14.CNhs10521.399-16E28.05
eyeball, embryo E15.CNhs10593.426-16C95.58
eyeball, embryo E17.CNhs11023.1261-18D46.93
eyeball, neonate N00.CNhs11207.633-15C67.89
eyeball, neonate N01.CNhs11140.1532-43E78.58
eyeball, neonate N02.CNhs11205.1551-44G86.47
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E25.60
forelimb, embryo E12.CNhs10600.359-14H27.75
forelimb, embryo E13.CNhs10589.384-1E27.74
forelimb, embryo E14.CNhs10577.413-26A85.92
forelimb, embryo E15.CNhs11007.437-20E75.84
forelimb, embryo E17.CNhs10598.1517-43C44.88
forelimb, embryo E18.CNhs11008.1520-43B56.38
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C85.62
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D26.95
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D55.11
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F55.39
heart, embryo E13.CNhs11013.376-3I95.22
heart, embryo E14.CNhs10597.403-26D45.45
heart, embryo E15.CNhs11017.431-16C86.10
heart, embryo E16.CNhs11021.457-17C67.40
heart, embryo E17.CNhs11025.479-18E56.51
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E36.07
heart, neonate N03.CNhs11221.1349-25I25.92
heart, neonate N10.CNhs11118.749-24G16.24
heart, neonate N16.CNhs11209.782-15G14.54
heart, neonate N20.CNhs11127.821-26I63.80
heart, neonate N25.CNhs11196.1351-25D33.29
heart, neonate N30.CNhs11202.1390-42D24.16
hippocampus, adult.CNhs10478.13-16E89.88
hippocampus, neonate N00.CNhs11228.627-43G114.51
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A33.17
intestine, embryo E12.CNhs11019.1251-16I55.55
intestine, embryo E13.CNhs11010.381-16D57.20
intestine, embryo E15.CNhs10602.976-16D84.64
intestine, embryo E16.CNhs10585.463-22H45.04
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E95.11
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F26.37
intestine, neonate N10.CNhs11098.755-23A54.29
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.39
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F87.08
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I27.33
kidney, embryo E18.CNhs11001.1288-20C75.62
kidney, neonate N00.CNhs11214.646-21G76.87
kidney, neonate N10.CNhs11206.758-6D54.43
kidney, neonate N20.CNhs11113.832-19I13.84
kidney, neonate N25.CNhs11122.1353-25F33.77
kidney, neonate N30.CNhs11203.1385-42H14.81
liver, adult pregnant day01.CNhs10466.508-5B26.23
liver, embryo E12.CNhs10601.355-15F86.51
liver, embryo E13.CNhs10524.378-3H65.70
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D73.04
liver, embryo E16.CNhs10523.462-17F53.86
liver, embryo E17.CNhs10510.481-18A36.11
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F43.57
liver, neonate N03.CNhs11123.1345-25G28.79
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H25.58
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A35.05
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D17.72
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G27.01
lung, embryo E14.CNhs10604.404-26F87.50
lung, embryo E15.CNhs11020.432-17C55.43
lung, embryo E16.CNhs10998.458-17B65.16
lung, embryo E17.CNhs10605.480-44A65.70
lung, embryo E18.CNhs10583.1287-20I65.48
lung, neonate N00.CNhs11224.640-42C64.49
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A35.09
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H23.04
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B62.46
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C214.77
medulla oblongata, neonate N30.CNhs11200.1396-42A317.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.28
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.10
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.20
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E25.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.91
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.12
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D86.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D95.66
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.88
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.48
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I913.82
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H73.03
ovary, neonate N00.CNhs11217.1299-22I44.72
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F44.13
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I74.00
pancreas, neonate N00.CNhs11105.645-26G92.58
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.85
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E65.76
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F64.99
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E92.44
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C32.97
skin, neonate N00.CNhs11124.650-25G44.68
skin, neonate N03.CNhs11215.662-22H35.55
skin, neonate N06.CNhs11097.693-20I53.82
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G21.88
spleen, embryo E16.CNhs11035.461-43C12.68
spleen, embryo E18.CNhs11011.1271-21F24.44
spleen, neonate N10.CNhs11116.752-24D14.33
spleen, neonate N20.CNhs11112.824-19H13.69
spleen, neonate N25.CNhs11099.1354-25G33.89
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C94.06
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D35.53
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E37.59
stomach, embryo E15.CNhs10603.1252-16G84.27
stomach, embryo E16.CNhs11022.459-17D46.80
stomach, embryo E17.CNhs11006.1035-18D56.06
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B85.26
stomach, neonate N07.CNhs11210.718-18A94.96
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I16.09
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C58.93
testis, embryo E16.CNhs11033.470-26G59.72
testis, embryo E17.CNhs11029.486-18I56.07
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B76.45
testis, neonate N07.CNhs11222.726-26I48.07
testis, neonate N10.CNhs11204.763-44D96.82
testis, neonate N20.CNhs11110.839-18H37.25
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B53.48
thymus, embryo E14.CNhs11041.402-44I43.24
thymus, embryo E15.CNhs11005.430-45I24.31
thymus, embryo E16.CNhs11002.456-26C54.81
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G43.77
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C74.73
thymus, neonate N06.CNhs11197.681-26C44.64
thymus, neonate N07.CNhs11211.713-19D33.96
thymus, neonate N10.CNhs11194.748-24E44.54
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G25.26
tongue, adult.CNhs10499.32-1B46.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H36.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F711.39
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.72
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D53.22
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A320.05
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D719.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A417.13
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A513.60
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A614.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A710.36
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A912.94
whole body, embryo E11.CNhs11014.324-5I88.30
whole body, embryo E12.CNhs10587.857-27C911.57
whole body, embryo E13.CNhs10512.372-23H27.85
whole body, embryo E14.5.CNhs10578.420-27D26.81
whole body, embryo E14.CNhs10519.395-14B16.08
whole body, embryo E16.CNhs10514.453-14F22.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G57.10
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G57.55
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.14
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.20
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G57.43
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.43
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G58.60
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.65
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.81
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.70
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.68
whole body, embryo E17.5.CNhs10513.490-9F97.14
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C25.37
whole body, neonate N01.CNhs10576.659-23C65.55
whole body, neonate N06.CNhs10515.692-21D12.43
whole body, neonate N10.CNhs10518.761-6B46.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron1.41e-0933
neuronal stem cell1.41e-0933
neuroblast1.41e-0933
electrically signaling cell1.41e-0933
CNS neuron (sensu Vertebrata)5.09e-0823
neuroblast (sensu Vertebrata)5.09e-0823

Uber anatomy
Ontology termp-valuen
neurectoderm6.21e-1364
neural plate6.21e-1364
presumptive neural plate6.21e-1364
nervous system7.26e-1375
central nervous system1.48e-1273
regional part of nervous system1.65e-1254
gray matter3.74e-1234
ectoderm-derived structure9.55e-1295
ectoderm9.55e-1295
presumptive ectoderm9.55e-1295
neural tube2.43e-1152
neural rod2.43e-1152
future spinal cord2.43e-1152
neural keel2.43e-1152
structure with developmental contribution from neural crest8.33e-1192
ecto-epithelium1.05e-1073
brain grey matter1.63e-0929
regional part of telencephalon1.63e-0929
telencephalon1.63e-0929
brain6.38e-0947
future brain6.38e-0947
pre-chordal neural plate6.92e-0949
regional part of brain1.85e-0846
anterior neural tube5.51e-0840
occipital lobe1.47e-0710
visual cortex1.47e-0710
neocortex1.47e-0710
regional part of forebrain1.72e-0739
forebrain1.72e-0739
future forebrain1.72e-0739
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