FFCP PHASE1:Hg19::chr11:47470591..47470604,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5913 | |EntrezGene=5913 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9863 | |HGNC=9863 | ||
|TSSclassifier=strong | |||
|UniProt=E9PJP9 | |UniProt=E9PJP9 | ||
|association_with_transcript=0bp_to_ENST00000524487_5end | |association_with_transcript=0bp_to_ENST00000524487_5end | ||
|cluster_id=chr11:47470591..47470604,- | |||
|coexpression_cluster_id=C397 | |||
|description=CAGE_peak_4_at_RAPSN_5end | |description=CAGE_peak_4_at_RAPSN_5end | ||
|id=chr11:47470591..47470604,- | |id=chr11:47470591..47470604,- | ||
|ontology_enrichment_celltype=CL:0000188!1.22e-41!9;CL:0000515!3.77e-25!4;CL:0000680!6.16e-13!57;CL:0000056!6.16e-13!57;CL:0000355!6.16e-13!57;CL:0000594!8.36e-09!3;CL:0000183!1.90e-08!59;CL:0000187!1.58e-07!54;CL:0002242!1.74e-07!1;CL:0000228!1.74e-07!1;CL:0002372!1.74e-07!1 | |ontology_enrichment_celltype=CL:0000188!1.22e-41!9;CL:0000515!3.77e-25!4;CL:0000680!6.16e-13!57;CL:0000056!6.16e-13!57;CL:0000355!6.16e-13!57;CL:0000594!8.36e-09!3;CL:0000183!1.90e-08!59;CL:0000187!1.58e-07!54;CL:0002242!1.74e-07!1;CL:0000228!1.74e-07!1;CL:0002372!1.74e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000056;6.67e-45;4!CL:0000188;1.97e-43;9!CL:0000680;1.60e-39;7!CL:0000515;2.45e-34;3!CL:0000228;2.20e-12;1!CL:0002372;2.20e-12;1!CL:0002321;3.23e-12;15!CL:0002575;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,5.96e-45,4;CL:0000188,1.70e-43,9;CL:0000680,2.25e-14,58;CL:0000056,2.25e-14,58;CL:0000355,2.25e-14,58;CL:0000228,1.96e-12,1;CL:0002372,1.96e-12,1;CL:0000222,8.42e-08,121;CL:0002575,4.83e-07,2;CL:0000187,7.71e-07,55 | |||
|ontology_enrichment_development_v019=CL:0000515;6.67e-45;4!CL:0000355;2.29e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!6.21e-22!61;UBERON:0002036!6.21e-22!61;UBERON:0003082!6.21e-22!61;UBERON:0002385!3.95e-21!63;UBERON:0001015!3.95e-21!63;UBERON:0000383!3.95e-21!63;UBERON:0004290!1.12e-18!70;UBERON:0000914!2.64e-17!83;UBERON:0002329!2.64e-17!83;UBERON:0003077!2.64e-17!83;UBERON:0003059!2.64e-17!83;UBERON:0007282!2.64e-17!83;UBERON:0009618!2.64e-17!83;UBERON:0007285!2.64e-17!83;UBERON:0000486!1.89e-15!82;UBERON:0001630!6.32e-13!2;UBERON:0005090!6.32e-13!2;UBERON:0005256!1.53e-12!143;UBERON:0000490!1.09e-11!138;UBERON:0001723!1.39e-08!3;UBERON:0001033!1.39e-08!3;UBERON:0010056!1.39e-08!3;UBERON:0003104!1.83e-08!238;UBERON:0009142!1.83e-08!238;UBERON:0005418!2.09e-07!1;UBERON:0001389!2.09e-07!1;UBERON:0000026!2.09e-07!1;UBERON:0008784!2.09e-07!1;UBERON:0006058!2.09e-07!1;UBERON:0003663!2.09e-07!1;UBERON:0001383!2.09e-07!1;UBERON:0004256!2.09e-07!1;UBERON:0002529!2.09e-07!1;UBERON:0004708!2.09e-07!1;UBERON:0002101!2.09e-07!1;UBERON:0004709!2.09e-07!1;UBERON:0003661!2.09e-07!1;UBERON:0002471!2.09e-07!1;UBERON:0004357!2.09e-07!1;UBERON:0009872!2.09e-07!1;UBERON:0004347!2.09e-07!1;UBERON:0005420!2.09e-07!1;UBERON:0005732!2.09e-07!1;UBERON:0006057!2.09e-07!1;UBERON:0000978!2.09e-07!1;UBERON:0002103!2.09e-07!1;UBERON:0001665!2.09e-07!1;UBERON:0003823!2.09e-07!1;UBERON:0000154!2.09e-07!1;UBERON:0005733!2.09e-07!1;UBERON:0005730!2.09e-07!1;UBERON:0002426!3.41e-07!1;UBERON:0003831!3.41e-07!1;UBERON:0003898!3.41e-07!1;UBERON:0004830!3.41e-07!1;UBERON:0001774!3.41e-07!1;UBERON:0003830!3.41e-07!1;UBERON:0005175!3.41e-07!1;UBERON:0003897!3.41e-07!1;UBERON:0001103!3.41e-07!1;UBERON:0010084!3.41e-07!1;UBERON:0000475!3.56e-07!365;UBERON:0007029!4.08e-07!1;UBERON:0001301!5.19e-07!1;UBERON:0002100!6.58e-07!216;UBERON:0002204!8.89e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;1.35e-81;16!UBERON:0002036;1.35e-81;16!UBERON:0002385;1.14e-40;31!UBERON:0001015;1.14e-40;31!UBERON:0000383;1.14e-40;31!UBERON:0001389;3.64e-12;1!UBERON:0000026;3.64e-12;1!UBERON:0008784;3.64e-12;1!UBERON:0006058;3.64e-12;1!UBERON:0003663;3.64e-12;1!UBERON:0004256;3.64e-12;1!UBERON:0004708;3.64e-12;1!UBERON:0002101;3.64e-12;1!UBERON:0004709;3.64e-12;1!UBERON:0002529;3.64e-12;1!UBERON:0010538;3.64e-12;1!UBERON:0003661;3.64e-12;1!UBERON:0010890;3.64e-12;1!UBERON:0002471;3.64e-12;1!UBERON:0001383;3.64e-12;1!UBERON:0010758;3.64e-12;1!UBERON:0010707;3.64e-12;1!UBERON:0000978;3.64e-12;1!UBERON:0002103;3.64e-12;1!UBERON:0001665;3.64e-12;1!UBERON:0003823;3.64e-12;1!UBERON:0000154;3.64e-12;1!UBERON:0010709;3.64e-12;1!UBERON:0002204;7.70e-09;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,4.25e-20,62;UBERON:0002036,4.25e-20,62;UBERON:0003082,4.25e-20,62;UBERON:0002385,2.01e-19,64;UBERON:0001015,2.01e-19,64;UBERON:0000383,2.01e-19,64;UBERON:0002329,2.30e-17,71;UBERON:0003059,2.30e-17,71;UBERON:0007282,2.30e-17,71;UBERON:0004290,2.30e-17,71;UBERON:0009618,2.30e-17,71;UBERON:0003077,4.20e-17,72;UBERON:0007285,4.20e-17,72;UBERON:0007524,7.55e-17,73;UBERON:0007503,1.13e-15,78;UBERON:0000486,1.22e-14,83;UBERON:0005256,1.68e-13,122;UBERON:0005418,2.75e-12,1;UBERON:0001389,2.75e-12,1;UBERON:0000026,2.75e-12,1;UBERON:0008784,2.75e-12,1;UBERON:0006058,2.75e-12,1;UBERON:0003663,2.75e-12,1;UBERON:0004256,2.75e-12,1;UBERON:0004708,2.75e-12,1;UBERON:0002101,2.75e-12,1;UBERON:0004709,2.75e-12,1;UBERON:0002529,2.75e-12,1;UBERON:0010538,2.75e-12,1;UBERON:0003661,2.75e-12,1;UBERON:0010890,2.75e-12,1;UBERON:0002471,2.75e-12,1;UBERON:0001383,2.75e-12,1;UBERON:0004357,2.75e-12,1;UBERON:0004347,2.75e-12,1;UBERON:0005420,2.75e-12,1;UBERON:0005732,2.75e-12,1;UBERON:0010758,2.75e-12,1;UBERON:0010707,2.75e-12,1;UBERON:0000978,2.75e-12,1;UBERON:0002103,2.75e-12,1;UBERON:0001665,2.75e-12,1;UBERON:0003823,2.75e-12,1;UBERON:0000154,2.75e-12,1;UBERON:0010709,2.75e-12,1;UBERON:0005733,2.75e-12,1;UBERON:0005730,2.75e-12,1;UBERON:0000490,8.42e-11,148;UBERON:0003104,7.55e-10,160;UBERON:0009142,7.55e-10,160;UBERON:0002100,1.54e-07,199;UBERON:0005090,9.02e-07,2;UBERON:0001630,9.02e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,7.3504355692771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,6.37037749337349,4.10952645100767,10.0274139414342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4120238000559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,2.80345083047154,0.770243085573222,1.84204409671355,2.48105830472155,0,0.435050081742686,1.78975917573812,8.01288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.4028042309785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65102371835417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,0.821302454849976,5.799072156691,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,1.66645102024618,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,7.3504355692771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,6.37037749337349,4.10952645100767,10.0274139414342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.4120238000559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,2.80345083047154,0.770243085573222,1.84204409671355,2.48105830472155,0,0.435050081742686,1.78975917573812,8.01288320820636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.949138274156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,40.4028042309785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65102371835417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,0.821302454849976,5.799072156691,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,1.66645102024618,0,0.0620747142958579,0,0,0,0.217716747896961,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@RAPSN | |short_description=p4@RAPSN | ||
}} | }} |
Latest revision as of 05:28, 18 September 2015
Short description: | p4@RAPSN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RAPSN_5end |
Coexpression cluster: | C397_mesenchymal_Myoblast_rhabdomyosarcoma_Hepatic_Melanocyte_astrocytoma_Skeletal |
Association with transcript: | 0bp_to_ENST00000524487_5end |
EntrezGene: | RAPSN |
HGNC: | 9863 |
UniProt: | E9PJP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 5.96e-45 | 4 |
cell of skeletal muscle | 1.70e-43 | 9 |
muscle precursor cell | 2.25e-14 | 58 |
myoblast | 2.25e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.25e-14 | 58 |
multinucleate cell | 1.96e-12 | 1 |
myotube | 1.96e-12 | 1 |
mesodermal cell | 8.42e-08 | 121 |
central nervous system pericyte | 4.83e-07 | 2 |
muscle cell | 7.71e-07 | 55 |