FFCP PHASE1:Mm9::chr1:137662795..137662802,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=27280 | |EntrezGene=27280 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=600 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WV95 | |UniProt=Q9WV95 | ||
|association_with_transcript=99bp_to_ENSMUST00000038945_5end | |association_with_transcript=99bp_to_ENSMUST00000038945_5end | ||
|cluster_id=chr1:137662795..137662802,+ | |||
|description=CAGE_peak_3_at_Phlda3_5end | |description=CAGE_peak_3_at_Phlda3_5end | ||
|id=chr1:137662795..137662802,+ | |id=chr1:137662795..137662802,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.31e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,8.97e-13,6;CL:0000187,8.97e-13,6;CL:0000056,8.97e-13,6;CL:0000222,6.84e-11,7;CL:0000192,3.40e-10,3;CL:0000359,3.40e-10,3;CL:0002539,3.40e-10,3;CL:0000514,3.40e-10,3;CL:0002321,3.57e-09,70;CL:0000068,1.04e-08,3;CL:0002202,1.04e-08,3;CL:0000069,1.04e-08,3;CL:0002632,1.04e-08,3;CL:0002368,1.04e-08,3;CL:0000307,1.04e-08,3;CL:0000377,1.04e-08,3;CL:0000355,2.23e-08,9;CL:0000878,3.44e-07,2;CL:0000129,3.44e-07,2;CL:0000333,6.86e-07,10;CL:0000095,6.86e-07,10;CL:0000243,6.86e-07,10;CL:0000123,6.86e-07,10;CL:0000125,6.86e-07,10;CL:0000030,6.86e-07,10;CL:0000339,6.86e-07,10;CL:0000708,7.14e-07,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000383,2.34e-10,10;UBERON:0001135,3.40e-10,3;UBERON:0004237,3.40e-10,3;UBERON:0004695,3.40e-10,3;UBERON:0002111,3.40e-10,3;UBERON:0004178,3.40e-10,3;UBERON:0003126,1.04e-08,3;UBERON:0001005,1.04e-08,3;UBERON:0007196,1.04e-08,3;UBERON:0001558,1.04e-08,3;UBERON:0001134,2.23e-08,9;UBERON:0002036,2.23e-08,9;UBERON:0002385,2.23e-08,9;UBERON:0000486,2.23e-08,9;UBERON:0007503,2.23e-08,9;UBERON:0001015,2.23e-08,9;UBERON:0002329,2.23e-08,9;UBERON:0003082,2.23e-08,9;UBERON:0003059,2.23e-08,9;UBERON:0007282,2.23e-08,9;UBERON:0004290,2.23e-08,9;UBERON:0009618,2.23e-08,9;UBERON:0000947,1.00e-07,4;UBERON:0001637,1.00e-07,4;UBERON:0004573,1.00e-07,4;UBERON:0003509,1.00e-07,4;UBERON:0004571,1.00e-07,4;UBERON:0010191,1.00e-07,4;UBERON:0004572,1.00e-07,4;UBERON:0003210,7.14e-07,2;UBERON:0007524,8.92e-07,11;UBERON:0003077,8.92e-07,11;UBERON:0007285,8.92e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,7.05022180663233,8.31290836000019,9.17733760808408,1.56478268869608,0.65407546914134,1.09843091367236,0.777719596297134,0.55994568650145,0,0,0,0,2.05807548828758,0.286533439938757,3.09403255366465,0.202316460859598,0,0,4.06613438482959,1.77858959222228,0.449949858640699,0,1.4209602298922,4.19440154725767,4.99483796918021,0.103689612308478,0,0,0.856952953211411,0.441737081903227,0,0,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0,0,1.3959149950069,0,0.30559649555362,0.589257170947335,0.854230084794618,0.186399445825301,1.66597625333005,0.755715601067855,0,0,0,0,0,0,0.983110940922263,2.55645483867087,1.55871602761721,2.12003744706204,0.281686839553361,2.56652954828636,0,0,1.29894624606728,1.77351905832569,1.51657333504435,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.376999773989026,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0,0.505445516867349,0.210441855886474,0,0,0,0,0.476255494059295,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.657587197282725,0.278047249225598,0,1.02891068203972,0,0,0,0,0.414251545071004,0,0.540186184383045,0,0,0,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.350679099451593,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.481651769963376,0.35163505977661,1.14754461763673,1.51482556322624,1.26203287766503,0.780877488593277,0,0.238968797952552,0.891194696329576,1.13230612315533,0.404810701674894,1.46127928955656,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0,0,0,0.23467170806371,0.847328283455281,0,1.48397627647332,0.322928853391811,0.482503399425247,1.07435109602823,0.656563598980245,0,0.741701208042039,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.436725127492355,0.674321731924103,0.247960367176008,0.785267825952089,0,0,0,0.149516546043979,0,0,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.721172697119813,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,2.49403421976732,1.10992976687032,0.179427713218951,0.335769232728157,0.772758376128762,0.375364950902364,0.183151624267265,3.85863082342319,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,1.22769312950907,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0.61506478758457,0,0,0,0,0,0,0,0,0,0,7.05022180663233,8.31290836000019,9.17733760808408,1.56478268869608,0.65407546914134,1.09843091367236,0.777719596297134,0.55994568650145,0,0,0,0,2.05807548828758,0.286533439938757,3.09403255366465,0.202316460859598,0,0,4.06613438482959,1.77858959222228,0.449949858640699,0,1.4209602298922,4.19440154725767,4.99483796918021,0.103689612308478,0,0,0.856952953211411,0.441737081903227,0,0,0,0,0.510749352340751,0.153606533256243,0.131886287730194,0,0,1.3959149950069,0,0.30559649555362,0.589257170947335,0.854230084794618,0.186399445825301,1.66597625333005,0.755715601067855,0,0,0,0,0,0,0.983110940922263,2.55645483867087,1.55871602761721,2.12003744706204,0.281686839553361,2.56652954828636,0,0,1.29894624606728,1.77351905832569,1.51657333504435,0.11418387971906,0,0.148442139064825,0,0,0,0,0.117588707135705,0.376999773989026,0.247194967734374,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.449371918214468,0,0.125654352112864,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0,0.505445516867349,0.210441855886474,0,0,0,0,0.476255494059295,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.657587197282725,0.278047249225598,0,1.02891068203972,0,0,0,0,0.414251545071004,0,0.540186184383045,0,0,0,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0.350679099451593,0,0.147610147979602,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0.179397413521912,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.289298117163023,0,0,0,0,0.481651769963376,0.35163505977661,1.14754461763673,1.51482556322624,1.26203287766503,0.780877488593277,0,0.238968797952552,0.891194696329576,1.13230612315533,0.404810701674894,1.46127928955656,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.258717367565509,0,0.177340233642274,0,0,0,0.23467170806371,0.847328283455281,0,1.48397627647332,0.322928853391811,0.482503399425247,1.07435109602823,0.656563598980245,0,0.741701208042039,0,0,0,0,0,0,0,0,0.138199973804424,0,0,0.203319467126849,0.648032044930808,0.836353184057875,0.436725127492355,0.674321731924103,0.247960367176008,0.785267825952089,0,0,0,0.149516546043979,0,0,0.258319646955462,0.337912250981556,0.234714477291508,0.13020438484395,0.209718688851422,0,0,0,0.202725215290164,0.205421914329655,0.129920822977795,0,0.198681354781265,0.721172697119813,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.194915761479505,0.192423683280659,0.116876902181569,2.49403421976732,1.10992976687032,0.179427713218951,0.335769232728157,0.772758376128762,0.375364950902364,0.183151624267265,3.85863082342319,0.501572104035363,0,0,0.572895513439397,0,0,0,0,0,0,0,0,0,0.341467211508268,0.243106717068294,0.209613162627982,0,0.666740183404846,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0,0.128050304809739,0.287177344778066,0,0.347652977834566,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,0,0.355905054372522,0.197008964751127,1.22769312950907,0.309873682371932,0.385813221962283,0,0,0.214871054048298,0.57386499620653,0.220591419119515,0.927471342481686 | ||
|short_description=p3@Phlda3 | |short_description=p3@Phlda3 | ||
}} | }} |
Latest revision as of 10:52, 26 September 2015
Short description: | p3@Phlda3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Phlda3_5end |
Coexpression cluster: | MCL_coexpression_mm9:600 |
Association with transcript: | 99bp_to_ENSMUST00000038945_5end |
EntrezGene: | Phlda3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 8.97e-13 | 6 |
muscle cell | 8.97e-13 | 6 |
myoblast | 8.97e-13 | 6 |
mesodermal cell | 6.84e-11 | 7 |
smooth muscle cell | 3.40e-10 | 3 |
vascular associated smooth muscle cell | 3.40e-10 | 3 |
aortic smooth muscle cell | 3.40e-10 | 3 |
smooth muscle myoblast | 3.40e-10 | 3 |
embryonic cell | 3.57e-09 | 70 |
duct epithelial cell | 1.04e-08 | 3 |
epithelial cell of tracheobronchial tree | 1.04e-08 | 3 |
branched duct epithelial cell | 1.04e-08 | 3 |
epithelial cell of lower respiratory tract | 1.04e-08 | 3 |
respiratory epithelial cell | 1.04e-08 | 3 |
tracheal epithelial cell | 1.04e-08 | 3 |
tracheoblast | 1.04e-08 | 3 |
multi-potent skeletal muscle stem cell | 2.23e-08 | 9 |
central nervous system macrophage | 3.44e-07 | 2 |
microglial cell | 3.44e-07 | 2 |
migratory neural crest cell | 6.86e-07 | 10 |
neuron associated cell | 6.86e-07 | 10 |
glial cell (sensu Vertebrata) | 6.86e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 6.86e-07 | 10 |
glial cell | 6.86e-07 | 10 |
glioblast | 6.86e-07 | 10 |
glioblast (sensu Vertebrata) | 6.86e-07 | 10 |
leptomeningeal cell | 7.14e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
musculature of body | 2.34e-10 | 10 |
smooth muscle tissue | 3.40e-10 | 3 |
blood vessel smooth muscle | 3.40e-10 | 3 |
arterial system smooth muscle | 3.40e-10 | 3 |
artery smooth muscle tissue | 3.40e-10 | 3 |
aorta smooth muscle tissue | 3.40e-10 | 3 |
trachea | 1.04e-08 | 3 |
respiratory airway | 1.04e-08 | 3 |
tracheobronchial tree | 1.04e-08 | 3 |
lower respiratory tract | 1.04e-08 | 3 |
skeletal muscle tissue | 2.23e-08 | 9 |
striated muscle tissue | 2.23e-08 | 9 |
muscle tissue | 2.23e-08 | 9 |
multilaminar epithelium | 2.23e-08 | 9 |
epithelial vesicle | 2.23e-08 | 9 |
musculature | 2.23e-08 | 9 |
somite | 2.23e-08 | 9 |
myotome | 2.23e-08 | 9 |
presomitic mesoderm | 2.23e-08 | 9 |
presumptive segmental plate | 2.23e-08 | 9 |
dermomyotome | 2.23e-08 | 9 |
trunk paraxial mesoderm | 2.23e-08 | 9 |
aorta | 1.00e-07 | 4 |
artery | 1.00e-07 | 4 |
systemic artery | 1.00e-07 | 4 |
arterial blood vessel | 1.00e-07 | 4 |
systemic arterial system | 1.00e-07 | 4 |
aortic system | 1.00e-07 | 4 |
arterial system | 1.00e-07 | 4 |
blood-cerebrospinal fluid barrier | 7.14e-07 | 2 |
dense mesenchyme tissue | 8.92e-07 | 11 |
paraxial mesoderm | 8.92e-07 | 11 |
presumptive paraxial mesoderm | 8.92e-07 | 11 |