FFCP PHASE1:Hg19::chr12:108557939..108557943,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:108557939..108557943,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_at_chr12:108557939..108557943,+ | |description=CAGE_peak_at_chr12:108557939..108557943,+ | ||
|id=chr12:108557939..108557943,+ | |id=chr12:108557939..108557943,+ | ||
|ontology_enrichment_celltype=CL:0002274!3.12e-22!5;CL:0000457!3.12e-22!5;CL:0002191!3.12e-22!5;CL:0000097!3.12e-22!5;CL:0000831!3.12e-22!5;CL:0002028!3.12e-22!5;CL:0000163!2.96e-12!9 | |ontology_enrichment_celltype=CL:0002274!3.12e-22!5;CL:0000457!3.12e-22!5;CL:0002191!3.12e-22!5;CL:0000097!3.12e-22!5;CL:0000831!3.12e-22!5;CL:0002028!3.12e-22!5;CL:0000163!2.96e-12!9 | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.66e-21;2 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.26e-118;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.10e-59;6!UBERON:0002680;3.55e-40;9!UBERON:0001895;3.55e-40;9!UBERON:0004733;2.11e-30;12!UBERON:0002028;2.11e-30;12!UBERON:0004732;3.82e-28;13!UBERON:0001872;3.35e-09;5!UBERON:0001016;4.14e-09;83!UBERON:0000073;5.51e-09;53!UBERON:0002616;5.51e-09;53!UBERON:0001017;2.18e-07;75!UBERON:0000955;6.65e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,9.96e-60,6;UBERON:0006215,9.96e-60,6;UBERON:0002680,3.32e-40,9;UBERON:0001895,3.32e-40,9;UBERON:0010092,3.32e-40,9;UBERON:0004733,2.01e-30,12;UBERON:0002028,2.01e-30,12;UBERON:0007277,2.01e-30,12;UBERON:0004732,3.65e-28,13;UBERON:0003076,1.52e-24,15;UBERON:0003057,1.52e-24,15;UBERON:0001017,1.45e-12,81;UBERON:0000073,2.04e-12,53;UBERON:0002616,2.04e-12,53;UBERON:0001049,8.46e-12,56;UBERON:0005068,8.46e-12,56;UBERON:0006241,8.46e-12,56;UBERON:0007135,8.46e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0000955,9.88e-10,68;UBERON:0006238,9.88e-10,68;UBERON:0001872,3.49e-09,5;UBERON:0003075,2.64e-08,82;UBERON:0007284,2.64e-08,82;UBERON:0002346,5.98e-08,86 | |||
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| ||
|short_description=p@chr12:108557939..108557943,+ | |short_description=p@chr12:108557939..108557943,+ | ||
}} | }} |
Latest revision as of 04:34, 24 July 2015
Short description: | p@chr12:108557939..108557943, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:108557939..108557943, + |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 9.96e-60 | 6 |
rhombic lip | 9.96e-60 | 6 |
regional part of metencephalon | 3.32e-40 | 9 |
metencephalon | 3.32e-40 | 9 |
future metencephalon | 3.32e-40 | 9 |
segmental subdivision of hindbrain | 2.01e-30 | 12 |
hindbrain | 2.01e-30 | 12 |
presumptive hindbrain | 2.01e-30 | 12 |
segmental subdivision of nervous system | 3.65e-28 | 13 |
posterior neural tube | 1.52e-24 | 15 |
chordal neural plate | 1.52e-24 | 15 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.04e-12 | 53 |
regional part of brain | 2.04e-12 | 53 |
neural tube | 8.46e-12 | 56 |
neural rod | 8.46e-12 | 56 |
future spinal cord | 8.46e-12 | 56 |
neural keel | 8.46e-12 | 56 |
nervous system | 2.13e-11 | 89 |
brain | 9.88e-10 | 68 |
future brain | 9.88e-10 | 68 |
parietal lobe | 3.49e-09 | 5 |
neural plate | 2.64e-08 | 82 |
presumptive neural plate | 2.64e-08 | 82 |
neurectoderm | 5.98e-08 | 86 |