FFCP PHASE1:Hg19::chr12:111842525..111842550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:111842525..111842550,+ | |||
|coexpression_cluster_id=C575 | |||
|description=CAGE_peak_at_chr12:111842525..111842550,+ | |description=CAGE_peak_at_chr12:111842525..111842550,+ | ||
|id=chr12:111842525..111842550,+ | |id=chr12:111842525..111842550,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.88e-54!42;CL:0000860!3.24e-52!45;CL:0000738!1.09e-48!140;CL:0000557!8.31e-46!71;CL:0000766!1.66e-43!76;CL:0002009!1.77e-42!65;CL:0000839!4.21e-42!70;CL:0002194!1.23e-39!63;CL:0000576!1.23e-39!63;CL:0000040!1.23e-39!63;CL:0000559!1.23e-39!63;CL:0000988!9.74e-38!182;CL:0002031!1.41e-37!124;CL:0000037!2.07e-37!172;CL:0000566!2.07e-37!172;CL:0002087!1.81e-36!119;CL:0000763!9.61e-34!112;CL:0000049!9.61e-34!112;CL:0002032!2.20e-33!165;CL:0000837!2.20e-33!165;CL:0000134!1.23e-10!358;CL:0000451!1.38e-10!10;CL:0002393!1.94e-10!9;CL:0002397!1.94e-10!9;CL:0002320!5.21e-10!365;CL:0000080!2.85e-09!6;CL:0000219!4.30e-09!390;CL:0000453!7.13e-09!5;CL:0000990!2.93e-08!8;CL:0000048!8.48e-07!430 | |ontology_enrichment_celltype=CL:0002057!2.88e-54!42;CL:0000860!3.24e-52!45;CL:0000738!1.09e-48!140;CL:0000557!8.31e-46!71;CL:0000766!1.66e-43!76;CL:0002009!1.77e-42!65;CL:0000839!4.21e-42!70;CL:0002194!1.23e-39!63;CL:0000576!1.23e-39!63;CL:0000040!1.23e-39!63;CL:0000559!1.23e-39!63;CL:0000988!9.74e-38!182;CL:0002031!1.41e-37!124;CL:0000037!2.07e-37!172;CL:0000566!2.07e-37!172;CL:0002087!1.81e-36!119;CL:0000763!9.61e-34!112;CL:0000049!9.61e-34!112;CL:0002032!2.20e-33!165;CL:0000837!2.20e-33!165;CL:0000134!1.23e-10!358;CL:0000451!1.38e-10!10;CL:0002393!1.94e-10!9;CL:0002397!1.94e-10!9;CL:0002320!5.21e-10!365;CL:0000080!2.85e-09!6;CL:0000219!4.30e-09!390;CL:0000453!7.13e-09!5;CL:0000990!2.93e-08!8;CL:0000048!8.48e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.30e-64;33!CL:0002057;2.30e-64;33!CL:0000473;3.64e-43;39!CL:0000234;3.64e-43;39!CL:0000576;1.29e-39;48!CL:0000766;1.29e-29;69!CL:0002393;1.15e-14;6!CL:0002397;1.15e-14;6!CL:0000763;5.00e-13;100!CL:0002087;1.64e-12;104!CL:0001014;3.35e-12;2!CL:0001016;3.35e-12;2!CL:0000097;1.82e-10;5!CL:0000453;2.07e-10;5!CL:0000738;4.48e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.81e-76,42;CL:0002057,1.81e-76,42;CL:0000557,7.78e-67,67;CL:0000473,2.99e-66,48;CL:0000234,2.99e-66,48;CL:0002009,4.23e-59,61;CL:0000839,1.51e-58,66;CL:0000766,2.42e-57,72;CL:0002194,6.10e-52,59;CL:0000576,6.10e-52,59;CL:0000040,6.10e-52,59;CL:0000559,6.10e-52,59;CL:0000763,2.45e-45,108;CL:0000049,2.45e-45,108;CL:0000738,2.92e-37,136;CL:0002031,6.08e-35,120;CL:0000037,5.16e-29,168;CL:0002032,1.79e-28,161;CL:0000837,1.79e-28,161;CL:0000988,3.16e-27,177;CL:0002087,1.81e-26,115;CL:0001014,3.35e-12,2;CL:0001016,3.35e-12,2;CL:0000134,2.23e-11,354;CL:0002320,4.97e-11,361;CL:0000097,1.91e-10,5;CL:0002028,1.91e-10,5;CL:0000453,2.47e-10,5;CL:0000219,8.43e-10,386;CL:0002393,9.25e-10,9;CL:0002397,9.25e-10,9;CL:0000034,1.30e-08,441;CL:0000048,2.70e-08,427;CL:0000723,4.36e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.78e-57;42!CL:0000049;2.59e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.15e-43!102;UBERON:0003061!8.15e-43!102;UBERON:0002371!9.54e-39!80;UBERON:0002193!3.26e-37!112;UBERON:0001474!7.18e-35!86;UBERON:0002405!6.72e-31!115;UBERON:0004765!3.11e-27!101;UBERON:0001434!3.11e-27!101;UBERON:0003081!3.80e-15!216;UBERON:0002204!2.22e-12!167;UBERON:0002384!3.64e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.48e-58,76;UBERON:0001474,1.10e-53,82;UBERON:0004765,1.93e-48,90;UBERON:0002390,3.15e-47,98;UBERON:0003061,3.15e-47,98;UBERON:0002405,1.05e-46,93;UBERON:0001434,4.72e-43,100;UBERON:0002193,2.44e-42,108;UBERON:0002204,1.80e-23,167;UBERON:0003081,2.52e-21,203;UBERON:0000926,1.56e-12,315;UBERON:0004120,1.56e-12,315;UBERON:0006603,1.56e-12,315;UBERON:0002384,1.49e-10,371 | |||
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|short_description=p@chr12:111842525..111842550,+ | |short_description=p@chr12:111842525..111842550,+ | ||
}} | }} |
Latest revision as of 05:00, 24 July 2015
Short description: | p@chr12:111842525..111842550, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111842525..111842550, + |
Coexpression cluster: | C575_embryonic_CD14_CD34_immature_chorionic_Mast_testis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.48e-58 | 76 |
bone element | 1.10e-53 | 82 |
skeletal element | 1.93e-48 | 90 |
hematopoietic system | 3.15e-47 | 98 |
blood island | 3.15e-47 | 98 |
immune system | 1.05e-46 | 93 |
skeletal system | 4.72e-43 | 100 |
hemolymphoid system | 2.44e-42 | 108 |
musculoskeletal system | 1.80e-23 | 167 |
lateral plate mesoderm | 2.52e-21 | 203 |
mesoderm | 1.56e-12 | 315 |
mesoderm-derived structure | 1.56e-12 | 315 |
presumptive mesoderm | 1.56e-12 | 315 |
connective tissue | 1.49e-10 | 371 |