FFCP PHASE1:Mm9::chr17:25707767..25707793,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72834 | |EntrezGene=72834 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2197 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_NR_045176_5end | |association_with_transcript=11bp_to_NR_045176_5end | ||
|cluster_id=chr17:25707767..25707793,+ | |||
|description=CAGE_peak_1_at_2810468N07Rik_5end | |description=CAGE_peak_1_at_2810468N07Rik_5end | ||
|id=chr17:25707767..25707793,+ | |id=chr17:25707767..25707793,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.28e-10!44;CL:0000133!1.28e-10!44;CL:0002319!2.78e-10!43;CL:0000540!8.90e-10!33;CL:0000047!8.90e-10!33;CL:0000031!8.90e-10!33;CL:0000404!8.90e-10!33;CL:0000055!3.52e-08!50;CL:0000393!1.69e-07!39;CL:0000211!1.69e-07!39 | |ontology_enrichment_celltype=CL:0000221!1.28e-10!44;CL:0000133!1.28e-10!44;CL:0002319!2.78e-10!43;CL:0000540!8.90e-10!33;CL:0000047!8.90e-10!33;CL:0000031!8.90e-10!33;CL:0000404!8.90e-10!33;CL:0000055!3.52e-08!50;CL:0000393!1.69e-07!39;CL:0000211!1.69e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.98e-10,33;CL:0000047,1.98e-10,33;CL:0000031,1.98e-10,33;CL:0000404,1.98e-10,33;CL:0000221,5.25e-10,44;CL:0000133,5.25e-10,44;CL:0002319,1.26e-09,43;CL:0000393,4.21e-08,39;CL:0000211,4.21e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.50e-24!73;UBERON:0005743!1.50e-24!73;UBERON:0004121!4.93e-24!102;UBERON:0000924!4.93e-24!102;UBERON:0006601!4.93e-24!102;UBERON:0000073!1.13e-23!75;UBERON:0001016!1.13e-23!75;UBERON:0002346!2.86e-20!71;UBERON:0003075!2.86e-20!71;UBERON:0007284!2.86e-20!71;UBERON:0000033!1.62e-19!63;UBERON:0000955!1.26e-16!50;UBERON:0006238!1.26e-16!50;UBERON:0001049!1.85e-16!52;UBERON:0005068!1.85e-16!52;UBERON:0006241!1.85e-16!52;UBERON:0007135!1.85e-16!52;UBERON:0002616!4.02e-16!49;UBERON:0003056!1.47e-14!49;UBERON:0003080!4.06e-12!40;UBERON:0002780!1.27e-11!39;UBERON:0001890!1.27e-11!39;UBERON:0006240!1.27e-11!39;UBERON:0002020!6.34e-11!34;UBERON:0007811!1.33e-09!86;UBERON:0000153!1.39e-09!94;UBERON:0002791!1.43e-09!29;UBERON:0003528!1.43e-09!29;UBERON:0001893!1.43e-09!29;UBERON:0000956!7.27e-08!21;UBERON:0001869!7.27e-08!21;UBERON:0000203!7.27e-08!21;UBERON:0002619!8.70e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.92e-26,73;UBERON:0004121,8.09e-25,95;UBERON:0000924,8.09e-25,95;UBERON:0006601,8.09e-25,95;UBERON:0001016,8.57e-25,75;UBERON:0002346,5.17e-22,64;UBERON:0003075,5.17e-22,64;UBERON:0007284,5.17e-22,64;UBERON:0010371,6.67e-20,73;UBERON:0000073,1.04e-18,54;UBERON:0001049,2.42e-17,52;UBERON:0005068,2.42e-17,52;UBERON:0006241,2.42e-17,52;UBERON:0007135,2.42e-17,52;UBERON:0010314,4.49e-16,92;UBERON:0003056,1.20e-15,49;UBERON:0000955,1.72e-15,47;UBERON:0006238,1.72e-15,47;UBERON:0002616,6.35e-15,46;UBERON:0003080,9.80e-13,40;UBERON:0002780,3.69e-12,39;UBERON:0001890,3.69e-12,39;UBERON:0006240,3.69e-12,39;UBERON:0002020,3.35e-11,34;UBERON:0003528,1.14e-09,29;UBERON:0002791,1.14e-09,29;UBERON:0001893,1.14e-09,29;UBERON:0000956,5.59e-08,21;UBERON:0001869,5.59e-08,21;UBERON:0000203,5.59e-08,21;UBERON:0002021,1.10e-07,10;UBERON:0000411,1.10e-07,10;UBERON:0001950,1.10e-07,10 | |||
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| ||
|short_description=p1@2810468N07Rik | |short_description=p1@2810468N07Rik | ||
}} | }} |
Latest revision as of 02:24, 26 September 2015
Short description: | p1@2810468N07Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_2810468N07Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2197 |
Association with transcript: | 11bp_to_NR_045176_5end |
EntrezGene: | 2810468N07Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.98e-10 | 33 |
neuronal stem cell | 1.98e-10 | 33 |
neuroblast | 1.98e-10 | 33 |
electrically signaling cell | 1.98e-10 | 33 |
ectodermal cell | 5.25e-10 | 44 |
neurectodermal cell | 5.25e-10 | 44 |
neural cell | 1.26e-09 | 43 |
electrically responsive cell | 4.21e-08 | 39 |
electrically active cell | 4.21e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.92e-26 | 73 |
ectoderm-derived structure | 8.09e-25 | 95 |
ectoderm | 8.09e-25 | 95 |
presumptive ectoderm | 8.09e-25 | 95 |
nervous system | 8.57e-25 | 75 |
neurectoderm | 5.17e-22 | 64 |
neural plate | 5.17e-22 | 64 |
presumptive neural plate | 5.17e-22 | 64 |
ecto-epithelium | 6.67e-20 | 73 |
regional part of nervous system | 1.04e-18 | 54 |
neural tube | 2.42e-17 | 52 |
neural rod | 2.42e-17 | 52 |
future spinal cord | 2.42e-17 | 52 |
neural keel | 2.42e-17 | 52 |
structure with developmental contribution from neural crest | 4.49e-16 | 92 |
pre-chordal neural plate | 1.20e-15 | 49 |
brain | 1.72e-15 | 47 |
future brain | 1.72e-15 | 47 |
regional part of brain | 6.35e-15 | 46 |
anterior neural tube | 9.80e-13 | 40 |
regional part of forebrain | 3.69e-12 | 39 |
forebrain | 3.69e-12 | 39 |
future forebrain | 3.69e-12 | 39 |
gray matter | 3.35e-11 | 34 |
brain grey matter | 1.14e-09 | 29 |
regional part of telencephalon | 1.14e-09 | 29 |
telencephalon | 1.14e-09 | 29 |
cerebral cortex | 5.59e-08 | 21 |
cerebral hemisphere | 5.59e-08 | 21 |
pallium | 5.59e-08 | 21 |
occipital lobe | 1.10e-07 | 10 |
visual cortex | 1.10e-07 | 10 |
neocortex | 1.10e-07 | 10 |