FFCP PHASE1:Mm9::chr17:34046234..34046271,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000174321_5end | |association_with_transcript=0bp_to_ENSMUST00000174321_5end | ||
|cluster_id=chr17:34046234..34046271,- | |||
|description=CAGE_peak_1_at_ENSMUST00000174321_5end | |description=CAGE_peak_1_at_ENSMUST00000174321_5end | ||
|id=chr17:34046234..34046271,- | |id=chr17:34046234..34046271,- | ||
|ontology_enrichment_celltype=CL:0000117!5.30e-09!23;CL:0000337!5.30e-09!23 | |ontology_enrichment_celltype=CL:0000117!5.30e-09!23;CL:0000337!5.30e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.08e-12,23;CL:0000337,4.08e-12,23;CL:0002609,9.62e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.59e-15!34;UBERON:0001049!1.29e-14!52;UBERON:0005068!1.29e-14!52;UBERON:0006241!1.29e-14!52;UBERON:0007135!1.29e-14!52;UBERON:0002791!2.59e-13!29;UBERON:0003528!2.59e-13!29;UBERON:0001893!2.59e-13!29;UBERON:0002346!1.90e-12!71;UBERON:0003075!1.90e-12!71;UBERON:0007284!1.90e-12!71;UBERON:0002616!5.82e-12!49;UBERON:0000955!6.28e-12!50;UBERON:0006238!6.28e-12!50;UBERON:0001017!1.31e-11!73;UBERON:0005743!1.31e-11!73;UBERON:0003080!2.79e-11!40;UBERON:0000033!4.84e-11!63;UBERON:0000073!5.76e-11!75;UBERON:0001016!5.76e-11!75;UBERON:0000956!5.98e-11!21;UBERON:0001869!5.98e-11!21;UBERON:0000203!5.98e-11!21;UBERON:0002780!8.30e-11!39;UBERON:0001890!8.30e-11!39;UBERON:0006240!8.30e-11!39;UBERON:0007811!1.19e-10!86;UBERON:0003056!1.23e-10!49;UBERON:0000153!2.42e-09!94;UBERON:0002619!1.58e-08!17;UBERON:0004121!1.80e-08!102;UBERON:0000924!1.80e-08!102;UBERON:0006601!1.80e-08!102;UBERON:0002021!4.04e-07!10;UBERON:0000411!4.04e-07!10;UBERON:0001950!4.04e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.30e-19,34;UBERON:0003528,6.05e-17,29;UBERON:0002791,6.05e-17,29;UBERON:0001893,6.05e-17,29;UBERON:0001049,5.83e-16,52;UBERON:0005068,5.83e-16,52;UBERON:0006241,5.83e-16,52;UBERON:0007135,5.83e-16,52;UBERON:0000073,2.18e-15,54;UBERON:0000956,1.56e-13,21;UBERON:0001869,1.56e-13,21;UBERON:0000203,1.56e-13,21;UBERON:0002616,3.10e-13,46;UBERON:0001017,3.51e-13,73;UBERON:0002346,1.08e-12,64;UBERON:0003075,1.08e-12,64;UBERON:0007284,1.08e-12,64;UBERON:0000955,1.19e-12,47;UBERON:0006238,1.19e-12,47;UBERON:0003080,1.54e-12,40;UBERON:0001016,2.45e-12,75;UBERON:0002780,5.98e-12,39;UBERON:0001890,5.98e-12,39;UBERON:0006240,5.98e-12,39;UBERON:0002619,2.03e-10,17;UBERON:0003056,4.31e-10,49;UBERON:0010371,6.96e-10,73;UBERON:0002021,9.80e-09,10;UBERON:0000411,9.80e-09,10;UBERON:0001950,9.80e-09,10;UBERON:0004121,1.14e-08,95;UBERON:0000924,1.14e-08,95;UBERON:0006601,1.14e-08,95 | |||
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| ||
|short_description=p1@ENSMUST00000174321 | |short_description=p1@ENSMUST00000174321 | ||
}} | }} |
Latest revision as of 16:00, 4 August 2015
Short description: | p1@ENSMUST00000174321 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000174321_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | 0bp_to_ENSMUST00000174321_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.08e-12 | 23 |
neuroblast (sensu Vertebrata) | 4.08e-12 | 23 |
neuron of cerebral cortex | 9.62e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.30e-19 | 34 |
brain grey matter | 6.05e-17 | 29 |
regional part of telencephalon | 6.05e-17 | 29 |
telencephalon | 6.05e-17 | 29 |
neural tube | 5.83e-16 | 52 |
neural rod | 5.83e-16 | 52 |
future spinal cord | 5.83e-16 | 52 |
neural keel | 5.83e-16 | 52 |
regional part of nervous system | 2.18e-15 | 54 |
cerebral cortex | 1.56e-13 | 21 |
cerebral hemisphere | 1.56e-13 | 21 |
pallium | 1.56e-13 | 21 |
regional part of brain | 3.10e-13 | 46 |
central nervous system | 3.51e-13 | 73 |
neurectoderm | 1.08e-12 | 64 |
neural plate | 1.08e-12 | 64 |
presumptive neural plate | 1.08e-12 | 64 |
brain | 1.19e-12 | 47 |
future brain | 1.19e-12 | 47 |
anterior neural tube | 1.54e-12 | 40 |
nervous system | 2.45e-12 | 75 |
regional part of forebrain | 5.98e-12 | 39 |
forebrain | 5.98e-12 | 39 |
future forebrain | 5.98e-12 | 39 |
regional part of cerebral cortex | 2.03e-10 | 17 |
pre-chordal neural plate | 4.31e-10 | 49 |
ecto-epithelium | 6.96e-10 | 73 |
occipital lobe | 9.80e-09 | 10 |
visual cortex | 9.80e-09 | 10 |
neocortex | 9.80e-09 | 10 |
ectoderm-derived structure | 1.14e-08 | 95 |
ectoderm | 1.14e-08 | 95 |
presumptive ectoderm | 1.14e-08 | 95 |