FFCP PHASE1:Mm9::chr17:34462580..34462587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381091 | |EntrezGene=381091 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UUV9 | |UniProt=Q3UUV9 | ||
|association_with_transcript=-22bp_to_ENSMUST00000050325_5end | |association_with_transcript=-22bp_to_ENSMUST00000050325_5end | ||
|cluster_id=chr17:34462580..34462587,+ | |||
|description=CAGE_peak_2_at_H2-Eb2_5end | |description=CAGE_peak_2_at_H2-Eb2_5end | ||
|id=chr17:34462580..34462587,+ | |id=chr17:34462580..34462587,+ | ||
|ontology_enrichment_celltype=CL:0000553!7.97e-07!6;CL:0000556!7.97e-07!6 | |ontology_enrichment_celltype=CL:0000553!7.97e-07!6;CL:0000556!7.97e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,3.04e-22,6;CL:0000556,3.04e-22,6;CL:0000050,8.18e-15,9;CL:0000839,3.20e-10,13;CL:0000763,2.82e-08,16;CL:0002027,1.29e-07,3;CL:0002006,1.29e-07,3;CL:0002024,1.29e-07,3;CL:0002031,2.32e-07,25;CL:0000049,6.11e-07,19;CL:0000945,7.38e-07,1;CL:0000236,7.38e-07,1;CL:0000826,7.38e-07,1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.76e-13!48;UBERON:0004177!3.16e-10!29;UBERON:0002390!3.65e-10!45;UBERON:0003061!3.65e-10!45;UBERON:0003408!1.73e-08!24;UBERON:0002405!5.77e-08!70;UBERON:0002370!1.31e-07!23;UBERON:0000974!1.31e-07!23;UBERON:0004807!1.31e-07!23;UBERON:0005058!1.31e-07!23;UBERON:0003351!1.31e-07!23;UBERON:0009113!1.31e-07!23;UBERON:0003295!1.31e-07!23;UBERON:0009722!1.31e-07!23;UBERON:0005562!1.31e-07!23;UBERON:0007690!1.31e-07!23;UBERON:0006562!3.79e-07!24;UBERON:0001557!3.79e-07!24;UBERON:0001042!3.79e-07!24;UBERON:0008814!3.79e-07!24;UBERON:0009145!3.79e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,8.00e-26,48;UBERON:0002405,8.00e-26,48;UBERON:0002390,9.81e-18,45;UBERON:0003061,9.81e-18,45;UBERON:0002465,1.35e-16,3;UBERON:0001962,1.67e-11,2;UBERON:0001961,1.67e-11,2;UBERON:0001744,1.67e-11,2;UBERON:0004177,2.22e-10,29;UBERON:0005057,2.22e-10,29;UBERON:0000077,1.91e-08,35;UBERON:0003081,2.81e-08,87;UBERON:0002371,2.82e-08,16;UBERON:0002370,1.20e-07,23;UBERON:0000974,1.20e-07,23;UBERON:0004807,1.20e-07,23;UBERON:0005058,1.20e-07,23;UBERON:0003351,1.20e-07,23;UBERON:0009113,1.20e-07,23;UBERON:0003295,1.20e-07,23;UBERON:0009722,1.20e-07,23;UBERON:0005562,1.20e-07,23;UBERON:0007690,1.20e-07,23;UBERON:0006562,2.60e-07,24;UBERON:0003408,2.60e-07,24;UBERON:0001557,2.60e-07,24;UBERON:0001042,2.60e-07,24;UBERON:0008814,2.60e-07,24;UBERON:0009145,2.60e-07,24;UBERON:0000029,9.48e-07,1;UBERON:0001097,9.48e-07,1;UBERON:0003968,9.48e-07,1;UBERON:0001467,9.48e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01237633694913,1.39912375625629,8.67520954735154,5.75880621144103,6.79023442876848,0.17008658030214,0,0,1.43993180514066,1.60586496747019,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54352163625172,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0.854354403989263,0,0,0.376736914009382,1.23024804948923,1.37266903923914,0.509935289981566,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,2.52808896502543,0,0.102710957164827,0.389762468933385,1.25318686967237,0.79472541912506,0.841368146639782,0.443068581523732,1.00966449948148,0.381034033274999,0.604957110821043,1.55932609183604,1.05833025804362,1.5193997283604,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01237633694913,1.39912375625629,8.67520954735154,5.75880621144103,6.79023442876848,0.17008658030214,0,0,1.43993180514066,1.60586496747019,0,0,0,0.190023419456374,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.54352163625172,0,0,0,0,0,0.404632921719196,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0.127687338085188,0,0.263772575460388,0.274462930807229,0.52091337055676,0,0,0,0.294628585473668,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,3.10725460376606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0,0,0.20778804455956,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0.854354403989263,0,0,0.376736914009382,1.23024804948923,1.37266903923914,0.509935289981566,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0,0,0,0,0,2.52808896502543,0,0.102710957164827,0.389762468933385,1.25318686967237,0.79472541912506,0.841368146639782,0.443068581523732,1.00966449948148,0.381034033274999,0.604957110821043,1.55932609183604,1.05833025804362,1.5193997283604,0,0,0,0,0,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0.271608227691724,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@H2-Eb2 | |short_description=p2@H2-Eb2 | ||
}} | }} |
Latest revision as of 08:08, 26 September 2015
Short description: | p2@H2-Eb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_H2-Eb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -22bp_to_ENSMUST00000050325_5end |
EntrezGene: | H2-Eb2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 3.04e-22 | 6 |
megakaryocyte | 3.04e-22 | 6 |
megakaryocyte-erythroid progenitor cell | 8.18e-15 | 9 |
myeloid lineage restricted progenitor cell | 3.20e-10 | 13 |
myeloid cell | 2.82e-08 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.29e-07 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.29e-07 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.29e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 2.32e-07 | 25 |
common myeloid progenitor | 6.11e-07 | 19 |
lymphocyte of B lineage | 7.38e-07 | 1 |
B cell | 7.38e-07 | 1 |
pro-B cell | 7.38e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 8.00e-26 | 48 |
immune system | 8.00e-26 | 48 |
hematopoietic system | 9.81e-18 | 45 |
blood island | 9.81e-18 | 45 |
lymphoid system | 1.35e-16 | 3 |
gut-associated lymphoid tissue | 1.67e-11 | 2 |
mucosa-associated lymphoid tissue | 1.67e-11 | 2 |
lymphoid tissue | 1.67e-11 | 2 |
hemopoietic organ | 2.22e-10 | 29 |
immune organ | 2.22e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.91e-08 | 35 |
lateral plate mesoderm | 2.81e-08 | 87 |
bone marrow | 2.82e-08 | 16 |
thymus | 1.20e-07 | 23 |
neck | 1.20e-07 | 23 |
respiratory system epithelium | 1.20e-07 | 23 |
hemolymphoid system gland | 1.20e-07 | 23 |
pharyngeal epithelium | 1.20e-07 | 23 |
thymic region | 1.20e-07 | 23 |
pharyngeal gland | 1.20e-07 | 23 |
entire pharyngeal arch endoderm | 1.20e-07 | 23 |
thymus primordium | 1.20e-07 | 23 |
early pharyngeal endoderm | 1.20e-07 | 23 |
pharynx | 2.60e-07 | 24 |
gland of gut | 2.60e-07 | 24 |
upper respiratory tract | 2.60e-07 | 24 |
chordate pharynx | 2.60e-07 | 24 |
pharyngeal arch system | 2.60e-07 | 24 |
pharyngeal region of foregut | 2.60e-07 | 24 |
lymph node | 9.48e-07 | 1 |
axillary lymph node | 9.48e-07 | 1 |
peripheral lymph node | 9.48e-07 | 1 |
shoulder | 9.48e-07 | 1 |