FFCP PHASE1:Mm9::chr17:39984786..39984817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1400 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39984786..39984817,+ | |||
|description=CAGE_peak_at_chr17:39984786..39984817,+ | |description=CAGE_peak_at_chr17:39984786..39984817,+ | ||
|id=chr17:39984786..39984817,+ | |id=chr17:39984786..39984817,+ | ||
|ontology_enrichment_celltype=CL:0000548!3.04e-25!115;CL:0000004!3.04e-25!115;CL:0000255!3.04e-25!115;CL:0002371!4.87e-23!118;CL:0002321!5.16e-21!70;CL:0000220!5.16e-21!70;CL:0000144!1.89e-20!121;CL:0000012!1.89e-20!121;CL:0000055!8.35e-17!50;CL:0002319!8.44e-17!43;CL:0000221!9.38e-16!44;CL:0000133!9.38e-16!44;CL:0000723!2.68e-15!91;CL:0000048!2.68e-15!91;CL:0000034!5.84e-14!97;CL:0000540!8.38e-14!33;CL:0000047!8.38e-14!33;CL:0000031!8.38e-14!33;CL:0000404!8.38e-14!33;CL:0000393!1.87e-13!39;CL:0000211!1.87e-13!39;CL:0000117!4.70e-11!23;CL:0000337!4.70e-11!23;CL:0000063!9.82e-08!66;CL:0000219!1.52e-07!54 | |ontology_enrichment_celltype=CL:0000548!3.04e-25!115;CL:0000004!3.04e-25!115;CL:0000255!3.04e-25!115;CL:0002371!4.87e-23!118;CL:0002321!5.16e-21!70;CL:0000220!5.16e-21!70;CL:0000144!1.89e-20!121;CL:0000012!1.89e-20!121;CL:0000055!8.35e-17!50;CL:0002319!8.44e-17!43;CL:0000221!9.38e-16!44;CL:0000133!9.38e-16!44;CL:0000723!2.68e-15!91;CL:0000048!2.68e-15!91;CL:0000034!5.84e-14!97;CL:0000540!8.38e-14!33;CL:0000047!8.38e-14!33;CL:0000031!8.38e-14!33;CL:0000404!8.38e-14!33;CL:0000393!1.87e-13!39;CL:0000211!1.87e-13!39;CL:0000117!4.70e-11!23;CL:0000337!4.70e-11!23;CL:0000063!9.82e-08!66;CL:0000219!1.52e-07!54 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,5.16e-21,70;CL:0002319,8.44e-17,43;CL:0000221,9.38e-16,44;CL:0000133,9.38e-16,44;CL:0000723,2.68e-15,91;CL:0000048,2.68e-15,91;CL:0000034,5.84e-14,97;CL:0000540,8.38e-14,33;CL:0000047,8.38e-14,33;CL:0000031,8.38e-14,33;CL:0000404,8.38e-14,33;CL:0000393,1.87e-13,39;CL:0000211,1.87e-13,39;CL:0000117,4.70e-11,23;CL:0000337,4.70e-11,23;CL:0000219,1.52e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.05e-16!73;UBERON:0005743!2.05e-16!73;UBERON:0000073!2.37e-15!75;UBERON:0001016!2.37e-15!75;UBERON:0002020!1.21e-10!34;UBERON:0001049!1.12e-08!52;UBERON:0005068!1.12e-08!52;UBERON:0006241!1.12e-08!52;UBERON:0007135!1.12e-08!52;UBERON:0004121!1.40e-08!102;UBERON:0000924!1.40e-08!102;UBERON:0006601!1.40e-08!102;UBERON:0002791!2.06e-08!29;UBERON:0003528!2.06e-08!29;UBERON:0001893!2.06e-08!29;UBERON:0002616!6.44e-08!49;UBERON:0000955!7.50e-08!50;UBERON:0006238!7.50e-08!50;UBERON:0000956!1.60e-07!21;UBERON:0001869!1.60e-07!21;UBERON:0000203!1.60e-07!21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.05e-16,73;UBERON:0001016,2.37e-15,75;UBERON:0002020,1.21e-10,34;UBERON:0004121,4.69e-10,95;UBERON:0000924,4.69e-10,95;UBERON:0006601,4.69e-10,95;UBERON:0000073,6.33e-10,54;UBERON:0001049,1.12e-08,52;UBERON:0005068,1.12e-08,52;UBERON:0006241,1.12e-08,52;UBERON:0007135,1.12e-08,52;UBERON:0003528,2.06e-08,29;UBERON:0002791,2.06e-08,29;UBERON:0001893,2.06e-08,29;UBERON:0011216,1.47e-07,194;UBERON:0000956,1.60e-07,21;UBERON:0001869,1.60e-07,21;UBERON:0000203,1.60e-07,21;UBERON:0002346,2.77e-07,64;UBERON:0003075,2.77e-07,64;UBERON:0007284,2.77e-07,64 | |||
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| ||
|short_description=p@chr17:39984786..39984817,+ | |short_description=p@chr17:39984786..39984817,+ | ||
}} | }} |
Latest revision as of 21:26, 4 August 2015
Short description: | p@chr17:39984786..39984817, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39984786..39984817, + |
Coexpression cluster: | MCL_coexpression_mm9:1400 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 5.16e-21 | 70 |
neural cell | 8.44e-17 | 43 |
ectodermal cell | 9.38e-16 | 44 |
neurectodermal cell | 9.38e-16 | 44 |
somatic stem cell | 2.68e-15 | 91 |
multi fate stem cell | 2.68e-15 | 91 |
stem cell | 5.84e-14 | 97 |
neuron | 8.38e-14 | 33 |
neuronal stem cell | 8.38e-14 | 33 |
neuroblast | 8.38e-14 | 33 |
electrically signaling cell | 8.38e-14 | 33 |
electrically responsive cell | 1.87e-13 | 39 |
electrically active cell | 1.87e-13 | 39 |
CNS neuron (sensu Vertebrata) | 4.70e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.70e-11 | 23 |
motile cell | 1.52e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.05e-16 | 73 |
nervous system | 2.37e-15 | 75 |
gray matter | 1.21e-10 | 34 |
ectoderm-derived structure | 4.69e-10 | 95 |
ectoderm | 4.69e-10 | 95 |
presumptive ectoderm | 4.69e-10 | 95 |
regional part of nervous system | 6.33e-10 | 54 |
neural tube | 1.12e-08 | 52 |
neural rod | 1.12e-08 | 52 |
future spinal cord | 1.12e-08 | 52 |
neural keel | 1.12e-08 | 52 |
brain grey matter | 2.06e-08 | 29 |
regional part of telencephalon | 2.06e-08 | 29 |
telencephalon | 2.06e-08 | 29 |
organ system subdivision | 1.47e-07 | 194 |
cerebral cortex | 1.60e-07 | 21 |
cerebral hemisphere | 1.60e-07 | 21 |
pallium | 1.60e-07 | 21 |
neurectoderm | 2.77e-07 | 64 |
neural plate | 2.77e-07 | 64 |
presumptive neural plate | 2.77e-07 | 64 |