FFCP PHASE1:Mm9::chr3:127111855..127111899,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=109676 | |EntrezGene=109676 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=E9PW46,Q8C8R3 | |UniProt=E9PW46,Q8C8R3 | ||
|association_with_transcript=49bp_to_ENSMUST00000090335,ENSMUST00000171354,uc008rgv.1,uc008rgy.1,uc008rha.1,uc012cxg.1_5end | |association_with_transcript=49bp_to_ENSMUST00000090335,ENSMUST00000171354,uc008rgv.1,uc008rgy.1,uc008rha.1,uc012cxg.1_5end | ||
|cluster_id=chr3:127111855..127111899,- | |||
|description=CAGE_peak_1_at_Ank2_5end | |description=CAGE_peak_1_at_Ank2_5end | ||
|id=chr3:127111855..127111899,- | |id=chr3:127111855..127111899,- | ||
|ontology_enrichment_celltype=CL:0000540!1.65e-15!33;CL:0000047!1.65e-15!33;CL:0000031!1.65e-15!33;CL:0000404!1.65e-15!33;CL:0002319!2.34e-15!43;CL:0000221!4.30e-15!44;CL:0000133!4.30e-15!44;CL:0000393!9.36e-14!39;CL:0000211!9.36e-14!39;CL:0000055!3.27e-13!50;CL:0000117!9.34e-11!23;CL:0000337!9.34e-11!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.55e-16,33;CL:0000047,4.55e-16,33;CL:0000031,4.55e-16,33;CL:0000404,4.55e-16,33;CL:0002319,6.52e-16,43;CL:0000221,1.23e-15,44;CL:0000133,1.23e-15,44;CL:0000393,7.03e-14,39;CL:0000211,7.03e-14,39;CL:0000117,3.99e-11,23;CL:0000337,3.99e-11,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.38e-34!102;UBERON:0000924!4.38e-34!102;UBERON:0006601!4.38e-34!102;UBERON:0000073!9.36e-32!75;UBERON:0001016!9.36e-32!75;UBERON:0001017!1.80e-31!73;UBERON:0005743!1.80e-31!73;UBERON:0002346!2.36e-30!71;UBERON:0003075!2.36e-30!71;UBERON:0007284!2.36e-30!71;UBERON:0000033!6.61e-26!63;UBERON:0003056!4.61e-23!49;UBERON:0001049!1.38e-22!52;UBERON:0005068!1.38e-22!52;UBERON:0006241!1.38e-22!52;UBERON:0007135!1.38e-22!52;UBERON:0000955!1.28e-21!50;UBERON:0006238!1.28e-21!50;UBERON:0002616!4.11e-21!49;UBERON:0002020!1.16e-18!34;UBERON:0003080!1.09e-17!40;UBERON:0002780!3.25e-17!39;UBERON:0001890!3.25e-17!39;UBERON:0006240!3.25e-17!39;UBERON:0002791!2.76e-16!29;UBERON:0003528!2.76e-16!29;UBERON:0001893!2.76e-16!29;UBERON:0000956!1.96e-12!21;UBERON:0001869!1.96e-12!21;UBERON:0000203!1.96e-12!21;UBERON:0000153!2.12e-11!94;UBERON:0007811!2.58e-11!86;UBERON:0002619!1.11e-10!17;UBERON:0000468!1.59e-09!333;UBERON:0002021!2.62e-08!10;UBERON:0000411!2.62e-08!10;UBERON:0001950!2.62e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,5.48e-35,95;UBERON:0000924,5.48e-35,95;UBERON:0006601,5.48e-35,95;UBERON:0001016,5.64e-33,75;UBERON:0001017,1.11e-32,73;UBERON:0002346,3.39e-31,64;UBERON:0003075,3.39e-31,64;UBERON:0007284,3.39e-31,64;UBERON:0010371,7.22e-29,73;UBERON:0010314,8.46e-29,92;UBERON:0000073,1.37e-24,54;UBERON:0003056,6.26e-24,49;UBERON:0001049,1.97e-23,52;UBERON:0005068,1.97e-23,52;UBERON:0006241,1.97e-23,52;UBERON:0007135,1.97e-23,52;UBERON:0000955,1.12e-20,47;UBERON:0006238,1.12e-20,47;UBERON:0002616,3.66e-20,46;UBERON:0002020,2.37e-19,34;UBERON:0003080,2.44e-18,40;UBERON:0002780,7.61e-18,39;UBERON:0001890,7.61e-18,39;UBERON:0006240,7.61e-18,39;UBERON:0003528,7.05e-17,29;UBERON:0002791,7.05e-17,29;UBERON:0001893,7.05e-17,29;UBERON:0000956,7.16e-13,21;UBERON:0001869,7.16e-13,21;UBERON:0000203,7.16e-13,21;UBERON:0002619,4.76e-11,17;UBERON:0002021,1.40e-08,10;UBERON:0000411,1.40e-08,10;UBERON:0001950,1.40e-08,10 | |||
|phase1_expression=11.0502704502308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,10.3752813984305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.11514624341466,0.917733760808408,1.56478268869608,2.61630187656536,10.5449367712546,15.1655321277941,1.39986421625363,1.43752564364972,0,0,0,2.57259436035947,13.4670716771216,1.54701627683233,12.5436205732951,11.1088105647127,14.5781222806421,1.35537812827653,1.77858959222228,0.899899717281399,0,0,8.08920298399693,17.28982373947,18.664130215526,16.2007125998029,15.984697062705,21.7094748146891,20.5407743085001,15.4338407010842,12.6516021744072,10.1114066527102,25.3266526298594,28.9850257453376,30.5677001179925,19.5191705840687,13.7231465403614,21.3574481928272,23.451371916116,36.0168070420275,29.9484565642548,27.1058298635774,29.6133096062134,19.199142920006,5.30083353332288,8.16172849153284,0,0,0,0,0,0,1.26399978118577,0,0,0,2.11265129665021,0,0,0,0,0,0,0.68510327831436,0,3.41416919849097,8.32729568477452,7.30717147949139,5.30415643688935,7.83757730873637,13.7578787348775,1.0053327306374,0,6.79616977523585,0.884610551949874,5.50007289821191,1.76673214768315,1.45462575940567,1.86391761218122,62.6550905604711,51.3144431692965,0,0,0,0.127070227073065,22.7681771895331,33.3975440057597,27.3926487606044,56.8405527028744,68.7874580218589,27.0124457927428,41.6960046084137,3.86989582631202,2.23932547098167,0.252722758433675,10.3116509384372,24.592763719951,33.3358051428536,39.2535442975661,52.897391060336,59.3958637591092,55.6013546036248,36.4499708537345,45.2730898793277,2.58681591519411,4.72765200419548,3.87092473160687,1.97276159184817,10.2877482213471,6.268538997399,5.35033554660653,0.796137067273973,0,0,0,1.24275463521301,1.87620847984877,1.62055855314913,3.07768156260773,2.16440654922144,2.93107514486019,2.32533944750408,1.87791380979733,3.38619492864792,3.29119699826961,5.08919138645195,3.97237166774693,2.33919979880532,2.41505126820156,3.48936688776967,34.697841513081,28.8132914661996,0.330418782983798,0.793351699990633,2.34617075588757,7.19933682767359,5.92790322081629,5.84882221407693,5.11469500843202,3.80451252225118,0.474529061544512,4.6115707322723,4.27269854960458,4.77495532898762,4.09424582950152,0.898819408654221,1.51296634912286,1.1948476395262,1.32767530667157,3.08470984046268,2.25415471346161,1.22190796707189,0.775809948670503,1.47285221769669,0.316182685621286,0.295220295959204,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.739012760666419,3.7898282354097,1.79261474086228,1.01847051465113,0.938760993154008,0.335012514883631,0.238043640886014,1.17080188714679,1.57635144106191,1.99318220683897,1.91345722388985,1.14704320301017,1.03610989119537,1.01254341007058,0,0,0,0,28.7385556078148,32.8192722458169,3.93443868904021,2.52470927204373,23.9786246756355,28.5020283336546,30.1592756825919,13.1432838873904,18.7150886229211,19.5322806244294,30.3608026256171,40.331308391761,52.5732744668876,23.1351347823701,2.2710413633323,1.42452482933804,4.39794790254655,4.78413356620353,0,0.971122544619926,1.51161778482376,0.565815239267694,1.47650946440386,1.22974059177571,2.06742634534577,3.27180356529755,3.20847640546249,3.79244109522979,0,0,3.74483566329167,9.00305470156551,2.97524972700335,4.71541477069503,6.0295679438373,7.13475270408282,8.06290200950393,5.48036908406279,1.64270195644597,0.42366414172764,3.74898276693435,4.122156323537,8.55761461488299,3.37752379597673,2.38744688006273,3.61109979439135,2.62332752966866,32.0785772478182,0,0.619160603889667,0.555583582109135,0.565105371014073,0,0,0,0,0,0,3.95419991976419,4.06638934253697,4.64422965533745,4.59994251231831,2.62035076495413,3.9110660451598,4.54594006489348,1.83229159388821,1.68499465279331,0,0,1.79419855252775,0.827292452285488,0.388902376688095,1.03327858782185,1.520605129417,2.34714477291508,1.17183946359555,0.734015410979976,0,0.576060012515731,0.632022241256357,0.810900861160657,1.02710957164827,0.649604114888975,0.895133478337407,0.198681354781265,0.600977247599844,0,0.504832249740738,0.15241361331,0.201652370273681,0.292373642219257,0,0,2.94749498699775,0,0,0,2.70465431645067,2.064507229963,4.02933573387983,3.85863082342319,0.501572104035363,110.691361152945,113.240008180766,103.121192419091,67.0227411140382,72.6187470956881,83.093328712867,92.4780825317574,78.3558893610144,73.4090702554411,77.1462864510212,2.90604573235695,13.5668456956351,9.39034831647738,7.29320151204882,5.24032906569956,4.77993121970037,10.2233494788743,10.5077879191836,8.3438994493872,10.1078884705519,9.88569269571935,9.80856975207596,8.80230170216895,8.32326981263301,9.01736862603128,12.3836359733599,8.45955579397445,8.68091492086673,7.00546031365621,8.97913412819824,8.57173130963539,7.45398385869217,7.39152188836695,10.9009812474246,9.59915680236372,9.30760686808441,9.87811053512972,12.3642764375786,8.41985505844343,10.1005608898393,7.71127617807132,7.19082721341613,9.41231399290286,7.59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| |phase1_expression=11.0502704502308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,10.3752813984305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.88845226963366,1.11514624341466,0.917733760808408,1.56478268869608,2.61630187656536,10.5449367712546,15.1655321277941,1.39986421625363,1.43752564364972,0,0,0,2.57259436035947,13.4670716771216,1.54701627683233,12.5436205732951,11.1088105647127,14.5781222806421,1.35537812827653,1.77858959222228,0.899899717281399,0,0,8.08920298399693,17.28982373947,18.664130215526,16.2007125998029,15.984697062705,21.7094748146891,20.5407743085001,15.4338407010842,12.6516021744072,10.1114066527102,25.3266526298594,28.9850257453376,30.5677001179925,19.5191705840687,13.7231465403614,21.3574481928272,23.451371916116,36.0168070420275,29.9484565642548,27.1058298635774,29.6133096062134,19.199142920006,5.30083353332288,8.16172849153284,0,0,0,0,0,0,1.26399978118577,0,0,0,2.11265129665021,0,0,0,0,0,0,0.68510327831436,0,3.41416919849097,8.32729568477452,7.30717147949139,5.30415643688935,7.83757730873637,13.7578787348775,1.0053327306374,0,6.79616977523585,0.884610551949874,5.50007289821191,1.76673214768315,1.45462575940567,1.86391761218122,62.6550905604711,51.3144431692965,0,0,0,0.127070227073065,22.7681771895331,33.3975440057597,27.3926487606044,56.8405527028744,68.7874580218589,27.0124457927428,41.6960046084137,3.86989582631202,2.23932547098167,0.252722758433675,10.3116509384372,24.592763719951,33.3358051428536,39.2535442975661,52.897391060336,59.3958637591092,55.6013546036248,36.4499708537345,45.2730898793277,2.58681591519411,4.72765200419548,3.87092473160687,1.97276159184817,10.2877482213471,6.268538997399,5.35033554660653,0.796137067273973,0,0,0,1.24275463521301,1.87620847984877,1.62055855314913,3.07768156260773,2.16440654922144,2.93107514486019,2.32533944750408,1.87791380979733,3.38619492864792,3.29119699826961,5.08919138645195,3.97237166774693,2.33919979880532,2.41505126820156,3.48936688776967,34.697841513081,28.8132914661996,0.330418782983798,0.793351699990633,2.34617075588757,7.19933682767359,5.92790322081629,5.84882221407693,5.11469500843202,3.80451252225118,0.474529061544512,4.6115707322723,4.27269854960458,4.77495532898762,4.09424582950152,0.898819408654221,1.51296634912286,1.1948476395262,1.32767530667157,3.08470984046268,2.25415471346161,1.22190796707189,0.775809948670503,1.47285221769669,0.316182685621286,0.295220295959204,0.156998727841375,0,0.296452627087149,0.333690211432188,0.393117990226406,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.739012760666419,3.7898282354097,1.79261474086228,1.01847051465113,0.938760993154008,0.335012514883631,0.238043640886014,1.17080188714679,1.57635144106191,1.99318220683897,1.91345722388985,1.14704320301017,1.03610989119537,1.01254341007058,0,0,0,0,28.7385556078148,32.8192722458169,3.93443868904021,2.52470927204373,23.9786246756355,28.5020283336546,30.1592756825919,13.1432838873904,18.7150886229211,19.5322806244294,30.3608026256171,40.331308391761,52.5732744668876,23.1351347823701,2.2710413633323,1.42452482933804,4.39794790254655,4.78413356620353,0,0.971122544619926,1.51161778482376,0.565815239267694,1.47650946440386,1.22974059177571,2.06742634534577,3.27180356529755,3.20847640546249,3.79244109522979,0,0,3.74483566329167,9.00305470156551,2.97524972700335,4.71541477069503,6.0295679438373,7.13475270408282,8.06290200950393,5.48036908406279,1.64270195644597,0.42366414172764,3.74898276693435,4.122156323537,8.55761461488299,3.37752379597673,2.38744688006273,3.61109979439135,2.62332752966866,32.0785772478182,0,0.619160603889667,0.555583582109135,0.565105371014073,0,0,0,0,0,0,3.95419991976419,4.06638934253697,4.64422965533745,4.59994251231831,2.62035076495413,3.9110660451598,4.54594006489348,1.83229159388821,1.68499465279331,0,0,1.79419855252775,0.827292452285488,0.388902376688095,1.03327858782185,1.520605129417,2.34714477291508,1.17183946359555,0.734015410979976,0,0.576060012515731,0.632022241256357,0.810900861160657,1.02710957164827,0.649604114888975,0.895133478337407,0.198681354781265,0.600977247599844,0,0.504832249740738,0.15241361331,0.201652370273681,0.292373642219257,0,0,2.94749498699775,0,0,0,2.70465431645067,2.064507229963,4.02933573387983,3.85863082342319,0.501572104035363,110.691361152945,113.240008180766,103.121192419091,67.0227411140382,72.6187470956881,83.093328712867,92.4780825317574,78.3558893610144,73.4090702554411,77.1462864510212,2.90604573235695,13.5668456956351,9.39034831647738,7.29320151204882,5.24032906569956,4.77993121970037,10.2233494788743,10.5077879191836,8.3438994493872,10.1078884705519,9.88569269571935,9.80856975207596,8.80230170216895,8.32326981263301,9.01736862603128,12.3836359733599,8.45955579397445,8.68091492086673,7.00546031365621,8.97913412819824,8.57173130963539,7.45398385869217,7.39152188836695,10.9009812474246,9.59915680236372,9.30760686808441,9.87811053512972,12.3642764375786,8.41985505844343,10.1005608898393,7.71127617807132,7.19082721341613,9.41231399290286,7.59190521811233,9.25951732709479,10.2422336954558,8.18760629558929,12.4625211348013,13.0076065806813,6.61774257358547,4.40548887678801 | ||
|short_description=p1@Ank2 | |short_description=p1@Ank2 | ||
}} | }} |
Latest revision as of 14:02, 1 October 2015
Short description: | p1@Ank2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ank2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 49bp_to_ENSMUST00000090335, ENSMUST00000171354, uc008rgv.1, uc008rgy.1, uc008rha.1, uc012cxg.1_5end |
EntrezGene: | Ank2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.55e-16 | 33 |
neuronal stem cell | 4.55e-16 | 33 |
neuroblast | 4.55e-16 | 33 |
electrically signaling cell | 4.55e-16 | 33 |
neural cell | 6.52e-16 | 43 |
ectodermal cell | 1.23e-15 | 44 |
neurectodermal cell | 1.23e-15 | 44 |
electrically responsive cell | 7.03e-14 | 39 |
electrically active cell | 7.03e-14 | 39 |
CNS neuron (sensu Vertebrata) | 3.99e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.99e-11 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 5.48e-35 | 95 |
ectoderm | 5.48e-35 | 95 |
presumptive ectoderm | 5.48e-35 | 95 |
nervous system | 5.64e-33 | 75 |
central nervous system | 1.11e-32 | 73 |
neurectoderm | 3.39e-31 | 64 |
neural plate | 3.39e-31 | 64 |
presumptive neural plate | 3.39e-31 | 64 |
ecto-epithelium | 7.22e-29 | 73 |
structure with developmental contribution from neural crest | 8.46e-29 | 92 |
regional part of nervous system | 1.37e-24 | 54 |
pre-chordal neural plate | 6.26e-24 | 49 |
neural tube | 1.97e-23 | 52 |
neural rod | 1.97e-23 | 52 |
future spinal cord | 1.97e-23 | 52 |
neural keel | 1.97e-23 | 52 |
brain | 1.12e-20 | 47 |
future brain | 1.12e-20 | 47 |
regional part of brain | 3.66e-20 | 46 |
gray matter | 2.37e-19 | 34 |
anterior neural tube | 2.44e-18 | 40 |
regional part of forebrain | 7.61e-18 | 39 |
forebrain | 7.61e-18 | 39 |
future forebrain | 7.61e-18 | 39 |
brain grey matter | 7.05e-17 | 29 |
regional part of telencephalon | 7.05e-17 | 29 |
telencephalon | 7.05e-17 | 29 |
cerebral cortex | 7.16e-13 | 21 |
cerebral hemisphere | 7.16e-13 | 21 |
pallium | 7.16e-13 | 21 |
regional part of cerebral cortex | 4.76e-11 | 17 |
occipital lobe | 1.40e-08 | 10 |
visual cortex | 1.40e-08 | 10 |
neocortex | 1.40e-08 | 10 |