FFCP PHASE1:Hg19::chr12:72079842..72079890,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55266 | |EntrezGene=55266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25605 | |HGNC=25605 | ||
|TSSclassifier=strong | |||
|UniProt=Q96HH6 | |UniProt=Q96HH6 | ||
|association_with_transcript=0bp_to_ENST00000266673,ENST00000547816,NM_018279,uc001swr.1,uc001sws.2,uc009zru.1_5end | |association_with_transcript=0bp_to_ENST00000266673,ENST00000547816,NM_018279,uc001swr.1,uc001sws.2,uc009zru.1_5end | ||
|cluster_id=chr12:72079842..72079890,+ | |||
|description=CAGE_peak_1_at_TMEM19_5end | |description=CAGE_peak_1_at_TMEM19_5end | ||
|id=chr12:72079842..72079890,+ | |id=chr12:72079842..72079890,+ | ||
|ontology_enrichment_celltype=CL:0000236!5.03e-07!14 | |ontology_enrichment_celltype=CL:0000236!5.03e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.39e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.03e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.82e-16!57;UBERON:0005068!2.82e-16!57;UBERON:0006241!2.82e-16!57;UBERON:0007135!2.82e-16!57;UBERON:0002616!1.76e-15!59;UBERON:0000955!5.62e-15!69;UBERON:0006238!5.62e-15!69;UBERON:0005743!4.11e-14!86;UBERON:0001017!4.46e-14!82;UBERON:0000073!1.39e-13!94;UBERON:0001016!1.39e-13!94;UBERON:0003080!1.50e-13!42;UBERON:0002780!2.06e-13!41;UBERON:0001890!2.06e-13!41;UBERON:0006240!2.06e-13!41;UBERON:0002346!3.36e-12!90;UBERON:0001893!7.08e-12!34;UBERON:0003075!1.69e-11!86;UBERON:0007284!1.69e-11!86;UBERON:0001869!1.71e-11!32;UBERON:0002791!2.19e-11!33;UBERON:0002020!5.42e-11!34;UBERON:0003528!5.42e-11!34;UBERON:0007023!1.25e-10!115;UBERON:0000153!5.72e-10!129;UBERON:0007811!5.72e-10!129;UBERON:0000033!7.26e-10!123;UBERON:0003056!1.43e-09!61;UBERON:0000924!6.45e-09!173;UBERON:0006601!6.45e-09!173;UBERON:0004121!2.43e-08!169;UBERON:0000956!3.52e-08!25;UBERON:0000203!3.52e-08!25;UBERON:0002619!7.26e-08!22;UBERON:0001950!3.12e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.42e-10;32!UBERON:0001893;2.12e-10;34!UBERON:0002791;2.94e-10;32!UBERON:0002780;3.18e-10;41!UBERON:0001890;3.18e-10;41!UBERON:0003528;8.04e-10;34!UBERON:0002020;8.04e-10;34!UBERON:0000073;1.88e-09;53!UBERON:0002616;1.88e-09;53!UBERON:0000956;3.40e-08;25!UBERON:0000203;3.40e-08;25!UBERON:0002619;6.47e-08;22!UBERON:0000955;8.41e-08;68!UBERON:0001017;2.29e-07;75!UBERON:0001950;3.28e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.99e-16,56;UBERON:0005068,3.99e-16,56;UBERON:0006241,3.99e-16,56;UBERON:0007135,3.99e-16,56;UBERON:0000073,1.10e-15,53;UBERON:0002616,1.10e-15,53;UBERON:0000955,8.19e-15,68;UBERON:0006238,8.19e-15,68;UBERON:0001017,6.55e-14,81;UBERON:0002780,2.06e-13,41;UBERON:0001890,2.06e-13,41;UBERON:0003080,2.06e-13,41;UBERON:0006240,2.06e-13,41;UBERON:0001016,2.44e-13,89;UBERON:0002346,4.58e-12,86;UBERON:0001893,7.08e-12,34;UBERON:0001869,1.71e-11,32;UBERON:0003075,2.30e-11,82;UBERON:0007284,2.30e-11,82;UBERON:0003528,5.42e-11,34;UBERON:0002020,5.42e-11,34;UBERON:0002791,5.89e-11,32;UBERON:0007023,1.16e-10,114;UBERON:0010314,1.55e-09,132;UBERON:0003056,2.06e-09,61;UBERON:0010371,7.13e-09,104;UBERON:0004121,1.67e-08,171;UBERON:0000924,1.67e-08,171;UBERON:0006601,1.67e-08,171;UBERON:0000956,3.52e-08,25;UBERON:0000203,3.52e-08,25;UBERON:0002619,7.25e-08,22;UBERON:0001950,3.12e-07,20 | |||
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| ||
|short_description=p1@TMEM19 | |short_description=p1@TMEM19 | ||
}} | }} |
Latest revision as of 17:27, 24 September 2015
Short description: | p1@TMEM19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM19_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266673, ENST00000547816, NM_018279, uc001swr.1, uc001sws.2, uc009zru.1_5end |
EntrezGene: | TMEM19 |
HGNC: | 25605 |
UniProt: | Q96HH6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.03e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.99e-16 | 56 |
neural rod | 3.99e-16 | 56 |
future spinal cord | 3.99e-16 | 56 |
neural keel | 3.99e-16 | 56 |
regional part of nervous system | 1.10e-15 | 53 |
regional part of brain | 1.10e-15 | 53 |
brain | 8.19e-15 | 68 |
future brain | 8.19e-15 | 68 |
central nervous system | 6.55e-14 | 81 |
regional part of forebrain | 2.06e-13 | 41 |
forebrain | 2.06e-13 | 41 |
anterior neural tube | 2.06e-13 | 41 |
future forebrain | 2.06e-13 | 41 |
nervous system | 2.44e-13 | 89 |
neurectoderm | 4.58e-12 | 86 |
telencephalon | 7.08e-12 | 34 |
cerebral hemisphere | 1.71e-11 | 32 |
neural plate | 2.30e-11 | 82 |
presumptive neural plate | 2.30e-11 | 82 |
brain grey matter | 5.42e-11 | 34 |
gray matter | 5.42e-11 | 34 |
regional part of telencephalon | 5.89e-11 | 32 |
adult organism | 1.16e-10 | 114 |
structure with developmental contribution from neural crest | 1.55e-09 | 132 |
pre-chordal neural plate | 2.06e-09 | 61 |
ecto-epithelium | 7.13e-09 | 104 |
ectoderm-derived structure | 1.67e-08 | 171 |
ectoderm | 1.67e-08 | 171 |
presumptive ectoderm | 1.67e-08 | 171 |
cerebral cortex | 3.52e-08 | 25 |
pallium | 3.52e-08 | 25 |
regional part of cerebral cortex | 7.25e-08 | 22 |
neocortex | 3.12e-07 | 20 |