FFCP PHASE1:Mm9::chr1:137043359..137043448,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68724 | |EntrezGene=68724 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3231 | |||
|TSSclassifier=NA | |||
|UniProt=Q8VEH3,Q9DAB3 | |UniProt=Q8VEH3,Q9DAB3 | ||
|association_with_transcript=0bp_to_ENSMUST00000027684,NM_026823,uc007csu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000027684,NM_026823,uc007csu.1_5end | ||
|cluster_id=chr1:137043359..137043448,+ | |||
|description=CAGE_peak_1_at_Arl8a_5end | |description=CAGE_peak_1_at_Arl8a_5end | ||
|id=chr1:137043359..137043448,+ | |id=chr1:137043359..137043448,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.33e-22!50;CL:0000221!1.24e-21!44;CL:0000133!1.24e-21!44;CL:0002319!1.37e-21!43;CL:0000393!5.81e-17!39;CL:0000211!5.81e-17!39;CL:0000540!3.81e-15!33;CL:0000047!3.81e-15!33;CL:0000031!3.81e-15!33;CL:0000404!3.81e-15!33;CL:0002321!6.84e-14!70;CL:0000220!6.84e-14!70;CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23;CL:0000333!1.90e-07!10;CL:0000095!1.90e-07!10;CL:0000243!1.90e-07!10;CL:0000123!1.90e-07!10;CL:0000125!1.90e-07!10;CL:0000030!1.90e-07!10;CL:0000339!1.90e-07!10 | |ontology_enrichment_celltype=CL:0000055!2.33e-22!50;CL:0000221!1.24e-21!44;CL:0000133!1.24e-21!44;CL:0002319!1.37e-21!43;CL:0000393!5.81e-17!39;CL:0000211!5.81e-17!39;CL:0000540!3.81e-15!33;CL:0000047!3.81e-15!33;CL:0000031!3.81e-15!33;CL:0000404!3.81e-15!33;CL:0002321!6.84e-14!70;CL:0000220!6.84e-14!70;CL:0000117!6.34e-13!23;CL:0000337!6.34e-13!23;CL:0000333!1.90e-07!10;CL:0000095!1.90e-07!10;CL:0000243!1.90e-07!10;CL:0000123!1.90e-07!10;CL:0000125!1.90e-07!10;CL:0000030!1.90e-07!10;CL:0000339!1.90e-07!10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.24e-21,44;CL:0000133,1.24e-21,44;CL:0002319,1.37e-21,43;CL:0000393,5.81e-17,39;CL:0000211,5.81e-17,39;CL:0000540,3.81e-15,33;CL:0000047,3.81e-15,33;CL:0000031,3.81e-15,33;CL:0000404,3.81e-15,33;CL:0002321,6.84e-14,70;CL:0000117,6.34e-13,23;CL:0000337,6.34e-13,23;CL:0000333,1.90e-07,10;CL:0000095,1.90e-07,10;CL:0000243,1.90e-07,10;CL:0000123,1.90e-07,10;CL:0000125,1.90e-07,10;CL:0000030,1.90e-07,10;CL:0000339,1.90e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-33!75;UBERON:0001016!1.92e-33!75;UBERON:0001017!4.41e-32!73;UBERON:0005743!4.41e-32!73;UBERON:0004121!9.90e-27!102;UBERON:0000924!9.90e-27!102;UBERON:0006601!9.90e-27!102;UBERON:0001049!4.93e-22!52;UBERON:0005068!4.93e-22!52;UBERON:0006241!4.93e-22!52;UBERON:0007135!4.93e-22!52;UBERON:0000955!2.50e-20!50;UBERON:0006238!2.50e-20!50;UBERON:0002616!7.59e-20!49;UBERON:0002020!7.15e-19!34;UBERON:0002346!9.41e-19!71;UBERON:0003075!9.41e-19!71;UBERON:0007284!9.41e-19!71;UBERON:0000033!5.70e-18!63;UBERON:0002791!6.00e-16!29;UBERON:0003528!6.00e-16!29;UBERON:0001893!6.00e-16!29;UBERON:0003080!1.72e-15!40;UBERON:0002780!4.73e-15!39;UBERON:0001890!4.73e-15!39;UBERON:0006240!4.73e-15!39;UBERON:0003056!1.40e-13!49;UBERON:0000956!9.12e-12!21;UBERON:0001869!9.12e-12!21;UBERON:0000203!9.12e-12!21;UBERON:0002619!7.17e-10!17;UBERON:0003076!2.60e-07!12;UBERON:0003057!2.60e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.92e-33,75;UBERON:0001017,4.41e-32,73;UBERON:0004121,1.62e-28,95;UBERON:0000924,1.62e-28,95;UBERON:0006601,1.62e-28,95;UBERON:0000073,6.72e-23,54;UBERON:0001049,4.93e-22,52;UBERON:0005068,4.93e-22,52;UBERON:0006241,4.93e-22,52;UBERON:0007135,4.93e-22,52;UBERON:0002346,8.91e-21,64;UBERON:0003075,8.91e-21,64;UBERON:0007284,8.91e-21,64;UBERON:0000955,6.59e-19,47;UBERON:0006238,6.59e-19,47;UBERON:0002020,7.15e-19,34;UBERON:0002616,1.96e-18,46;UBERON:0010371,9.14e-18,73;UBERON:0003528,6.00e-16,29;UBERON:0002791,6.00e-16,29;UBERON:0001893,6.00e-16,29;UBERON:0003080,1.72e-15,40;UBERON:0002780,4.73e-15,39;UBERON:0001890,4.73e-15,39;UBERON:0006240,4.73e-15,39;UBERON:0003056,1.40e-13,49;UBERON:0010314,1.97e-12,92;UBERON:0000956,9.12e-12,21;UBERON:0001869,9.12e-12,21;UBERON:0000203,9.12e-12,21;UBERON:0002619,7.17e-10,17;UBERON:0003076,2.60e-07,12;UBERON:0003057,2.60e-07,12 | |||
|phase1_expression=55.2513522511539,95.9682371008243,81.8998630901165,127.337432960175,136.744534275353,40.4589045307654,39.7141489012394,32.9264474776019,38.435321147405,33.2371627377231,11.6428218393343,18.028507932946,29.7889270080298,28.3242103837552,22.3183540416494,21.8673288781012,35.6776557845355,45.7420139769445,42.9168177185962,43.7121341351971,93.2924892957235,43.290854723586,30.8215751183944,46.3978026100879,48.8641768673072,66.6109078373423,51.2606775429299,47.1881999582097,76.0093677825496,48.1377547841468,40.1332224286102,12.7006134691926,17.221814052368,0,7.79899373328441,10.3065480122265,6.32925004413344,111.747945406754,89.8535646202371,71.7227529244104,135.881473735164,134.559960536814,109.725339785041,138.864190227062,160.479682120492,124.44469796562,296.526319507907,395.71565883051,350.179775278748,301.755203363288,186.041954340107,359.381410912429,65.4352163625172,31.1905721064878,39.6590682988108,153.58388331346,164.470194524846,136.137432361245,301.451526680801,330.090371065749,301.069916665435,218.893567716659,144.955051766116,314.514951189849,325.337033284535,338.89901482929,341.8437261015,582.474950867477,201.468916715372,223.164816062285,221.051534380303,294.506164920321,245.164080456291,205.784542681123,219.294437689725,193.955163974714,166.274980309077,227.283461791634,209.519311361516,328.396856448183,385.162979566145,300.56701481125,213.295811237055,175.019171719852,192.06739745545,238.354525648197,235.055644999319,287.614344908439,252.622580959502,239.183987737976,39.7114349521299,32.6961073252927,109.475384726948,25.3660500069774,26.6408331153544,30.4658283226188,52.2453242890117,87.9420464502778,74.2987973164205,75.6146689452128,81.2666532111447,69.2962978037316,48.4129955442627,42.6640021891999,50.8753946376353,53.965651346196,48.0248222764044,47.9572294820052,123.513370499701,72.885090280829,46.3205822465583,56.6305789660583,54.6558728496859,56.3702675666808,71.4939339385085,43.354974008738,120.878339222109,83.7230276566288,54.8458542208922,60.3390350303836,49.0268170982074,40.7295212633587,39.1422698558057,156.052164807155,135.512019308305,75.8707453969516,24.2026551501959,22.1964010467561,25.7952560958321,198.023225293176,196.267758609191,284.858416239864,236.401075461496,235.258220743904,233.138185995826,205.884162832984,58.3539554862312,49.513974302817,60.1480165072146,71.5502310014011,36.5638444725197,48.5093440354628,72.204914051945,65.2551861228646,71.0301051139863,70.5906598769522,70.838503767155,81.4915617827899,38.1555347491131,48.4111565229617,51.9055816283649,50.1958227259146,46.989985119126,51.5413206452806,59.6768195583036,33.6367910923253,18.9597560574573,23.6760074545538,36.941254921427,32.5187462880738,33.3027005173157,27.3694333420743,40.7200945206562,37.5819682637541,35.3271688512096,40.460906386571,40.5092836113425,54.0623535159995,43.1146806773319,41.370200947932,50.1815931088847,41.374596441369,44.3491232887922,43.8854989346416,220.804445992334,366.237515457873,134.81086345739,60.2947291992881,35.8324260899193,42.4993109504602,48.7119003797513,59.0932727146394,62.2658522765637,70.5737072877594,81.1444695241115,88.6080376415179,69.6198528376747,80.1794582325838,81.8849165900305,75.5008303269546,72.838522807772,76.2711076564226,40.9682666058656,34.2745537829186,32.6852433451933,33.8061204223222,41.3118797667043,48.1131724447585,60.0114737309202,68.7863289584946,68.9224415223635,64.9069082228671,24.0126627940591,16.5176654658933,16.3143965943958,15.7403478669398,15.2145091041377,20.258881419203,23.680204215672,30.2080944323351,26.5901771911058,23.0631587077988,37.3797336971122,32.3762624471598,32.1398803307997,26.2682033064996,21.7070870361514,33.2886029740723,93.3003610341354,28.4237117655727,32.4300303119632,27.6684489813557,33.0913250086788,40.5365143009194,62.3674339121356,75.5167217209681,64.1575036512197,65.9964775153349,79.0895652541136,71.1166785866303,68.7286227826264,74.63891422806,186.981192084698,179.488875660174,40.324670387561,49.6686143348518,220.275409463251,210.394977433005,68.5248071674503,52.5139528585096,121.155156255843,115.179429567508,138.51724474219,158.197344244589,160.415045339324,191.076658282462,147.351095409662,194.934657226845,188.552270080492,203.075071978582,61.4600568951803,45.4067289351501,52.2867139524979,73.0817644768332,35.84118735179,30.8331407916826,35.9765032788054,30.7426280002114,40.7516612175466,47.3450127833648,68.7419259827468,44.3511149962557,39.9277063790888,39.8206314999128,34.7881408297496,34.0347292719017,71.4923172082955,42.1342960033266,51.614114829319,46.7254736368871,78.9164039708117,80.0875991033297,95.6029809698323,108.998451783027,79.5537090335978,64.820613684329,80.2723368920061,60.8430273354061,69.4297034792394,49.8787889155849,42.9740438411291,42.6766339337159,81.9061150929881,241.609168519694,40.1546569874954,46.2306584237618,36.4833218918332,27.8785316366943,31.4396723758358,36.3757295398371,32.6358585588202,27.5704361077606,39.1105925866519,98.3310736555567,34.7969592939249,43.1037270308919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| ||
|short_description=p1@Arl8a | |short_description=p1@Arl8a | ||
}} | }} |
Latest revision as of 10:31, 26 September 2015
Short description: | p1@Arl8a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arl8a_5end |
Coexpression cluster: | MCL_coexpression_mm9:3231 |
Association with transcript: | 0bp_to_ENSMUST00000027684, NM_026823, uc007csu.1_5end |
EntrezGene: | Arl8a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.24e-21 | 44 |
neurectodermal cell | 1.24e-21 | 44 |
neural cell | 1.37e-21 | 43 |
electrically responsive cell | 5.81e-17 | 39 |
electrically active cell | 5.81e-17 | 39 |
neuron | 3.81e-15 | 33 |
neuronal stem cell | 3.81e-15 | 33 |
neuroblast | 3.81e-15 | 33 |
electrically signaling cell | 3.81e-15 | 33 |
embryonic cell | 6.84e-14 | 70 |
CNS neuron (sensu Vertebrata) | 6.34e-13 | 23 |
neuroblast (sensu Vertebrata) | 6.34e-13 | 23 |
migratory neural crest cell | 1.90e-07 | 10 |
neuron associated cell | 1.90e-07 | 10 |
glial cell (sensu Vertebrata) | 1.90e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 1.90e-07 | 10 |
glial cell | 1.90e-07 | 10 |
glioblast | 1.90e-07 | 10 |
glioblast (sensu Vertebrata) | 1.90e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.92e-33 | 75 |
central nervous system | 4.41e-32 | 73 |
ectoderm-derived structure | 1.62e-28 | 95 |
ectoderm | 1.62e-28 | 95 |
presumptive ectoderm | 1.62e-28 | 95 |
regional part of nervous system | 6.72e-23 | 54 |
neural tube | 4.93e-22 | 52 |
neural rod | 4.93e-22 | 52 |
future spinal cord | 4.93e-22 | 52 |
neural keel | 4.93e-22 | 52 |
neurectoderm | 8.91e-21 | 64 |
neural plate | 8.91e-21 | 64 |
presumptive neural plate | 8.91e-21 | 64 |
brain | 6.59e-19 | 47 |
future brain | 6.59e-19 | 47 |
gray matter | 7.15e-19 | 34 |
regional part of brain | 1.96e-18 | 46 |
ecto-epithelium | 9.14e-18 | 73 |
brain grey matter | 6.00e-16 | 29 |
regional part of telencephalon | 6.00e-16 | 29 |
telencephalon | 6.00e-16 | 29 |
anterior neural tube | 1.72e-15 | 40 |
regional part of forebrain | 4.73e-15 | 39 |
forebrain | 4.73e-15 | 39 |
future forebrain | 4.73e-15 | 39 |
pre-chordal neural plate | 1.40e-13 | 49 |
structure with developmental contribution from neural crest | 1.97e-12 | 92 |
cerebral cortex | 9.12e-12 | 21 |
cerebral hemisphere | 9.12e-12 | 21 |
pallium | 9.12e-12 | 21 |
regional part of cerebral cortex | 7.17e-10 | 17 |
posterior neural tube | 2.60e-07 | 12 |
chordal neural plate | 2.60e-07 | 12 |