FFCP PHASE1:Mm9::chr1:172787625..172787644,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:172787625..172787644,- | |||
|description=CAGE_peak_at_chr1:172787625..172787644,- | |description=CAGE_peak_at_chr1:172787625..172787644,- | ||
|id=chr1:172787625..172787644,- | |id=chr1:172787625..172787644,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!3.37e-28!10;UBERON:0000411!3.37e-28!10;UBERON:0001950!3.37e-28!10;UBERON:0002619!8.10e-20!17;UBERON:0000956!3.22e-19!21;UBERON:0001869!3.22e-19!21;UBERON:0000203!3.22e-19!21;UBERON:0002791!5.44e-16!29;UBERON:0003528!5.44e-16!29;UBERON:0001893!5.44e-16!29;UBERON:0002616!9.09e-16!49;UBERON:0002780!1.58e-15!39;UBERON:0001890!1.58e-15!39;UBERON:0006240!1.58e-15!39;UBERON:0000955!2.17e-15!50;UBERON:0006238!2.17e-15!50;UBERON:0003080!4.52e-15!40;UBERON:0003056!1.44e-13!49;UBERON:0002020!2.68e-13!34;UBERON:0000033!3.94e-13!63;UBERON:0001049!5.91e-11!52;UBERON:0005068!5.91e-11!52;UBERON:0006241!5.91e-11!52;UBERON:0007135!5.91e-11!52;UBERON:0002346!1.03e-09!71;UBERON:0003075!1.03e-09!71;UBERON:0007284!1.03e-09!71;UBERON:0001017!1.55e-09!73;UBERON:0005743!1.55e-09!73;UBERON:0000073!3.38e-09!75;UBERON:0001016!3.38e-09!75;UBERON:0007811!1.02e-08!86;UBERON:0004121!8.36e-08!102;UBERON:0000924!8.36e-08!102;UBERON:0006601!8.36e-08!102;UBERON:0000153!1.09e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,4.44e-33,10;UBERON:0000411,4.44e-33,10;UBERON:0001950,4.44e-33,10;UBERON:0000956,1.03e-25,21;UBERON:0001869,1.03e-25,21;UBERON:0000203,1.03e-25,21;UBERON:0002619,4.05e-25,17;UBERON:0003528,1.10e-22,29;UBERON:0002791,1.10e-22,29;UBERON:0001893,1.10e-22,29;UBERON:0002020,3.22e-19,34;UBERON:0002780,1.23e-16,39;UBERON:0001890,1.23e-16,39;UBERON:0006240,1.23e-16,39;UBERON:0003080,3.38e-16,40;UBERON:0000073,3.05e-14,54;UBERON:0002616,5.83e-14,46;UBERON:0000955,1.21e-13,47;UBERON:0006238,1.21e-13,47;UBERON:0003056,4.79e-13,49;UBERON:0001049,3.09e-12,52;UBERON:0005068,3.09e-12,52;UBERON:0006241,3.09e-12,52;UBERON:0007135,3.09e-12,52;UBERON:0001017,3.03e-10,73;UBERON:0001016,6.10e-10,75;UBERON:0002346,9.51e-10,64;UBERON:0003075,9.51e-10,64;UBERON:0007284,9.51e-10,64;UBERON:0010371,2.06e-08,73;UBERON:0001851,2.98e-08,1;UBERON:0005889,2.98e-08,1;UBERON:0004121,1.36e-07,95;UBERON:0000924,1.36e-07,95;UBERON:0006601,1.36e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,1.22885226604995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,3.66000482254901,0,9.56033761057521,7.92717917724025,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,0.343706364687375,6.16574267793578,7.55393897389701,4.05013500139084,8.10578165803597,10.8754178156209,8.80192529978094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766124028511126,1.22885226604995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,3.66000482254901,0,9.56033761057521,7.92717917724025,0.41557608911912,0.648965052271031,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38097570952153,0.572895513439397,0.343706364687375,6.16574267793578,7.55393897389701,4.05013500139084,8.10578165803597,10.8754178156209,8.80192529978094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:172787625..172787644,- | |short_description=p@chr1:172787625..172787644,- | ||
}} | }} |
Latest revision as of 05:24, 5 August 2015
Short description: | p@chr1:172787625..172787644, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:172787625..172787644, - |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 4.44e-33 | 10 |
visual cortex | 4.44e-33 | 10 |
neocortex | 4.44e-33 | 10 |
cerebral cortex | 1.03e-25 | 21 |
cerebral hemisphere | 1.03e-25 | 21 |
pallium | 1.03e-25 | 21 |
regional part of cerebral cortex | 4.05e-25 | 17 |
brain grey matter | 1.10e-22 | 29 |
regional part of telencephalon | 1.10e-22 | 29 |
telencephalon | 1.10e-22 | 29 |
gray matter | 3.22e-19 | 34 |
regional part of forebrain | 1.23e-16 | 39 |
forebrain | 1.23e-16 | 39 |
future forebrain | 1.23e-16 | 39 |
anterior neural tube | 3.38e-16 | 40 |
regional part of nervous system | 3.05e-14 | 54 |
regional part of brain | 5.83e-14 | 46 |
brain | 1.21e-13 | 47 |
future brain | 1.21e-13 | 47 |
pre-chordal neural plate | 4.79e-13 | 49 |
neural tube | 3.09e-12 | 52 |
neural rod | 3.09e-12 | 52 |
future spinal cord | 3.09e-12 | 52 |
neural keel | 3.09e-12 | 52 |
central nervous system | 3.03e-10 | 73 |
nervous system | 6.10e-10 | 75 |
neurectoderm | 9.51e-10 | 64 |
neural plate | 9.51e-10 | 64 |
presumptive neural plate | 9.51e-10 | 64 |
ecto-epithelium | 2.06e-08 | 73 |
cortex | 2.98e-08 | 1 |
zygote cortex | 2.98e-08 | 1 |
ectoderm-derived structure | 1.36e-07 | 95 |
ectoderm | 1.36e-07 | 95 |
presumptive ectoderm | 1.36e-07 | 95 |