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FFCP PHASE1:Mm9::chr3:84063658..84063709,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=80890
|EntrezGene=80890
|HGNC=
|HGNC=
|MCL_coexpression_id=2382
|TSSclassifier=NA
|UniProt=Q3UHH4
|UniProt=Q3UHH4
|association_with_transcript=0bp_to_uc008ppx.2_5end
|association_with_transcript=0bp_to_uc008ppx.2_5end
|cluster_id=chr3:84063658..84063709,-
|description=CAGE_peak_2_at_Trim2_5end
|description=CAGE_peak_2_at_Trim2_5end
|id=chr3:84063658..84063709,-
|id=chr3:84063658..84063709,-
|ontology_enrichment_celltype=CL:0000393!5.52e-10!39;CL:0000211!5.52e-10!39;CL:0000540!6.87e-10!33;CL:0000047!6.87e-10!33;CL:0000031!6.87e-10!33;CL:0000404!6.87e-10!33;CL:0000117!4.04e-08!23;CL:0000337!4.04e-08!23;CL:0000055!4.36e-07!50
|ontology_enrichment_celltype_v019_2=CL:0000393,3.81e-10,39;CL:0000211,3.81e-10,39;CL:0000540,4.76e-10,33;CL:0000047,4.76e-10,33;CL:0000031,4.76e-10,33;CL:0000404,4.76e-10,33;CL:0000117,3.03e-08,23;CL:0000337,3.03e-08,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.41e-19!102;UBERON:0000924!2.41e-19!102;UBERON:0006601!2.41e-19!102;UBERON:0001017!1.24e-15!73;UBERON:0005743!1.24e-15!73;UBERON:0000073!9.45e-15!75;UBERON:0001016!9.45e-15!75;UBERON:0002346!6.84e-14!71;UBERON:0003075!6.84e-14!71;UBERON:0007284!6.84e-14!71;UBERON:0002020!9.86e-14!34;UBERON:0000033!1.13e-12!63;UBERON:0001049!2.37e-12!52;UBERON:0005068!2.37e-12!52;UBERON:0006241!2.37e-12!52;UBERON:0007135!2.37e-12!52;UBERON:0000955!4.81e-12!50;UBERON:0006238!4.81e-12!50;UBERON:0002791!5.70e-12!29;UBERON:0003528!5.70e-12!29;UBERON:0001893!5.70e-12!29;UBERON:0002616!1.39e-11!49;UBERON:0000956!6.86e-10!21;UBERON:0001869!6.86e-10!21;UBERON:0000203!6.86e-10!21;UBERON:0004111!7.09e-10!122;UBERON:0003056!2.43e-09!49;UBERON:0003080!4.48e-09!40;UBERON:0002780!1.44e-08!39;UBERON:0001890!1.44e-08!39;UBERON:0006240!1.44e-08!39;UBERON:0000025!2.55e-08!114;UBERON:0002619!7.41e-08!17;UBERON:0000468!8.24e-08!333
|ontology_enrichment_uberon_v019_2=UBERON:0004121,2.45e-17,95;UBERON:0000924,2.45e-17,95;UBERON:0006601,2.45e-17,95;UBERON:0010371,1.30e-15,73;UBERON:0001017,4.29e-15,73;UBERON:0001016,3.14e-14,75;UBERON:0002020,5.78e-14,34;UBERON:0000073,4.24e-13,54;UBERON:0002346,1.61e-12,64;UBERON:0003075,1.61e-12,64;UBERON:0007284,1.61e-12,64;UBERON:0003528,3.61e-12,29;UBERON:0002791,3.61e-12,29;UBERON:0001893,3.61e-12,29;UBERON:0001049,4.45e-12,52;UBERON:0005068,4.45e-12,52;UBERON:0006241,4.45e-12,52;UBERON:0007135,4.45e-12,52;UBERON:0000955,3.27e-10,47;UBERON:0006238,3.27e-10,47;UBERON:0000956,4.76e-10,21;UBERON:0001869,4.76e-10,21;UBERON:0000203,4.76e-10,21;UBERON:0002616,9.09e-10,46;UBERON:0004111,2.42e-09,122;UBERON:0003056,3.35e-09,49;UBERON:0003080,6.54e-09,40;UBERON:0010314,1.67e-08,92;UBERON:0002780,2.12e-08,39;UBERON:0001890,2.12e-08,39;UBERON:0006240,2.12e-08,39;UBERON:0002619,5.62e-08,17;UBERON:0000025,8.18e-08,114
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|phase1_expression=5.92550734287738,3.14077866875425,1.36499771816861,6.0492842261366,7.51343594919521,2.01455126294268,0.934450562382103,0.387369970324729,0.422366166455,0.468129052643987,0.171217968225505,0.0797721589953364,1.88320802924326,0.874204024189974,0,0.202475267389826,0,0.630924330716475,0.137114433605739,0,10.4603246885816,0.0992909512008853,0,1.43993180514066,1.60586496747019,2.29692785646008,1.7230479846363,1.939241094173,2.66032787238923,1.00812051903972,1.99557459589774,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,8.05739635043695,7.50189291024408,4.58866880404204,0.782391344348039,1.09012578190223,5.71184075109627,4.86074747685709,2.09979632438044,1.43752564364972,0,1.45072428402269,0.672187598284928,3.8588915405392,3.15186783932632,3.09403255366465,8.09265843438391,6.87688273053643,6.97214543856797,0.677689064138264,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,13.6870288247191,11.6105106965254,12.8298226424343,9.71213346972932,5.52171352379034,7.34944795289724,4.60058260887535,4.5960939330501,14.3150645299205,16.2162919368188,19.3544231902867,5.01167893374737,4.84884511092771,4.68822033501084,15.9134309430787,7.87867654044352,10.2374826010463,12.6690291753677,11.2473627831291,7.45597783301202,1.21161909333094,1.51143120213571,5.50742528533188,6.88339101585109,1.3599426674155,7.01614149129162,5.84798775702902,2.68816132258401,4.21333260395256,2.55645483867087,2.07828803682295,2.12003744706204,4.22530259330042,2.56652954828636,0,0,0.216491041011214,0.253359865475099,0,7.87868770061514,5.17875767294343,5.78924342352817,1.38788261412909,5.48037860961854,7.84092690670599,6.63179618431539,9.17191915658498,5.52933001850572,0.741584903203122,7.66376591675532,0,2.58826959915855,1.98757366614354,2.42437626567611,9.31958806090611,12.296793474485,18.2218634927706,4.08731288333746,0.239630249011841,0,0.127070227073065,18.4242486467932,24.2475319493872,7.16229807043327,24.3354048269187,23.2701066170601,15.9996794310861,18.8199865158599,5.09196819251581,9.33052279575698,29.8212854951736,3.57751155007006,2.73252930221678,3.44853156650209,2.70093194708024,3.91832526372859,6.87168641428411,8.07116437794554,5.15359485078509,6.98499100995342,0.646703978798527,1.51284864134255,5.80638709741031,5.47989331068937,9.17555922444473,8.00979983000983,3.70407845534298,1.59227413454795,0.702213187313235,0,0,0,0.469052119962192,0.180062061461015,0.710234206755631,0.787056926989615,0.925602677324269,0.465067889500816,1.87791380979733,1.5179494507732,1.6455984991348,4.43252153013557,3.56702762001765,2.63159977365598,1.97595103761946,3.48936688776967,61.6149549292893,19.551876352064,2.97376904685418,4.49565963328025,2.55945900642281,3.48355007790658,2.70621668776396,1.00841762311671,1.33426826306922,3.04361001780095,5.21981967698963,4.94096864172033,4.52403375840485,3.18330355265841,3.31438948102504,3.59527763461689,4.32276099749388,5.17767310461355,0.948339504765408,3.31320686568214,7.88954149711563,3.66572390121566,5.23671715352589,7.15385362881249,12.3311247392302,15.6466756858378,14.4438829614065,14.1906738510071,3.55743152504579,0,0.196558995113203,0,0.608580364165509,0.964708639009667,0.25462585178142,1.43848068725405,0.810676133875177,3.0201755450689,1.43768206527355,5.95425516269605,9.36113019343682,15.1547326768267,18.477933592757,14.9557491622644,7.39012760666419,0.568474235311454,1.62964976442026,1.86719594352707,1.64283173801951,3.35012514883632,1.90434912708811,3.51240566144038,7.09358148477859,7.30833475840957,7.17546458958692,7.86543910635542,7.59813920209941,9.25753974921674,0,0,6.88469982226651,15.7283945393698,19.5871719785106,22.7390671988874,3.44263385291018,3.28212205365685,2.52406575533005,3.90438744296638,10.7711698866399,11.2315335037699,15.1503098376028,13.8707500086528,10.1202675418724,2.92255857911312,6.7198922250909,12.8528526568723,5.39372323791421,2.49291845134157,3.90928702448583,6.76377504187395,1.32745138339963,0.242780636154981,0.604647113929502,1.13163047853539,0.295301892880773,3.07435147943927,2.84271122485043,2.54473610634254,1.06949213515416,1.8962205476149,2.10837217149998,2.06271086496374,4.76615448055303,0.18006109403131,0.517434735131018,0.857348140126369,0.709360934569094,1.24858172321449,2.13913726782757,1.8267896946876,0.469343416127421,0.847328283455281,35.5050720868489,10.8824926941377,6.29711264114032,7.41848976616317,11.8178620563105,21.338316966858,4.37221254944776,20.3967832211561,1.36696704638282,1.857481811669,0.740778109478847,0.565105371014073,0.546776910884101,0.915112692826091,0.509935289981566,0.139951452323658,0.414599921413271,3.81868247206045,1.10717597753397,2.03319467126849,2.37611749807963,3.13632444021703,2.18362563746178,2.83215127408124,5.53778153359751,7.0674104335688,5.31421390496351,11.1841076355647,0,0.897099276263873,0.165458490457098,2.13896307178452,3.09983576346555,3.37912250981556,5.04636126176742,3.77592716047455,3.04092098834561,0.966336483304024,1.72818003754719,0.632022241256357,0.810900861160657,1.95150818613172,0.389762468933385,0.358053391334963,0.39736270956253,0.480781798079875,0.590758108698309,0.807731599585181,0.304827226619999,0.403304740547362,0.584747284438515,0.577271049841977,0.584384510907845,2.26730383615211,0,0.0897138566094757,0,4.056981474676,2.62755465631655,4.2124873581471,5.14484109789758,25.0786052017682,11.8597886949584,15.651058041244,15.4681788628637,10.1393377582776,10.9613203163303,15.107877947794,17.550585006027,13.9599572999508,19.4851235863208,18.6393712230655,1.97195960409936,1.59609949360412,3.58540572083682,6.56388136084394,2.93458427679175,4.59608771125035,4.22268782823069,5.15087643097235,5.13470735346904,3.53776096469316,5.0695859978048,3.9611531691076,5.3375659257833,4.86591158277006,4.13535376480416,4.76293691283074,3.36064545240081,4.62982129112892,2.47251540481984,4.41596760403192,5.14303878578123,4.08194354166476,3.33810665926249,4.79643174886684,5.17601592284318,3.72304274723377,3.47563148458268,3.41990624869196,5.16055632614275,5.05028044491965,5.10130577933949,5.31924204828043,2.45538625901814,4.18329471202108,4.43685205256625,5.49583271463481,4.44470056046276,4.51229213501426,2.86932498103265,4.63241980150983,4.86922454802885
|short_description=p2@Trim2
|short_description=p2@Trim2
}}
}}

Latest revision as of 18:29, 25 September 2015

Short description:p2@Trim2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trim2_5end
Coexpression cluster:MCL_coexpression_mm9:2382
Association with transcript: 0bp_to_uc008ppx.2_5end
EntrezGene:Trim2
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p2@Trim2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.05
CD326+ enterocyte, pool2.CNhs13197.11849-124I47.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.93
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.88
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A310.46
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D21.61
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I21.94
Ileum epithelium, pool1.CNhs13199.10252-104B92.66
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D88.06
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D97.50
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.71
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.86
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I91.45
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.67
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.86
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E13.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C38.09
Mouse Granule cells, donor2.CNhs12357.11731-123E36.88
Mouse Granule cells, donor3.CNhs12108.11636-122C76.97
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D513.69
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F511.61
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D912.83
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F19.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.52
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.35
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.60
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D314.32
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F316.22
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.35
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.69
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E415.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E57.88
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I610.24
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.67
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.46
Mouse Schwann, donor1.CNhs12507.11728-123D91.21
Mouse Schwann, donor2.CNhs12573.11746-123F91.51
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C87.02
Mouse hepatocyte, donor6.CNhs13090.11822-124F45.85
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.08
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.23
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H95.18
adrenal gland, adult.CNhs10508.49-24D75.79
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I17.84
adrenal gland, embryo E18.CNhs11026.1262-18F56.63
adrenal gland, neonate N00.CNhs11191.1311-23C19.17
adrenal gland, neonate N25.CNhs11223.1377-27I35.53
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H17.66
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.59
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H49.32
cerebellum, adult.CNhs10494.15-8B212.30
cerebellum, neonate N30.CNhs11135.1395-42I218.22
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A418.42
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F17.16
cortex, adult.CNhs10473.12-14D524.34
cortex, neonate N30.CNhs11107.1392-42F223.27
diencephalon, adult.CNhs10482.20-12F216.00
diencephalon, neonate N30.CNhs11201.1388-42B218.82
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.09
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A29.33
epididymis, adult.CNhs10490.58-23B229.82
eyeball, adult.CNhs10484.31-12G43.58
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C92.70
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C66.87
eyeball, neonate N01.CNhs11140.1532-43E78.07
eyeball, neonate N02.CNhs11205.1551-44G85.15
eyeball, neonate N16.CNhs11188.777-19A26.98
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E25.81
forelimb, embryo E14.CNhs10577.413-26A85.48
forelimb, embryo E15.CNhs11007.437-20E79.18
forelimb, embryo E17.CNhs10598.1517-43C48.01
forelimb, embryo E18.CNhs11008.1520-43B53.70
gonad, embryo E13.CNhs11044.1564-45I61.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.71
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G14.43
heart, neonate N16.CNhs11209.782-15G13.57
heart, neonate N20.CNhs11127.821-26I62.63
heart, neonate N25.CNhs11196.1351-25D31.98
heart, neonate N30.CNhs11202.1390-42D23.49
hippocampus, adult.CNhs10478.13-16E861.61
hippocampus, neonate N00.CNhs11228.627-43G119.55
intestinal mucosa, adult.CNhs10506.860-29I32.97
intestine, adult.CNhs10496.178-9A34.50
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D53.48
intestine, embryo E15.CNhs10602.976-16D82.71
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D31.33
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E94.94
intestine, neonate N06.CNhs11102.688-20B84.52
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.31
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E34.32
intestine, neonate N30.CNhs11131.1384-42G15.18
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F83.31
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I23.67
kidney, embryo E18.CNhs11001.1288-20C75.24
kidney, neonate N00.CNhs11214.646-21G77.15
kidney, neonate N10.CNhs11206.758-6D512.33
kidney, neonate N20.CNhs11113.832-19I115.65
kidney, neonate N25.CNhs11122.1353-25F314.44
kidney, neonate N30.CNhs11203.1385-42H114.19
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.61
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G41.44
liver, neonate N00.CNhs11117.641-24F40.81
liver, neonate N03.CNhs11123.1345-25G23.02
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H25.95
liver, neonate N10.CNhs11115.751-24B99.36
liver, neonate N20.CNhs11220.823-25A315.15
liver, neonate N25.CNhs11198.1368-26H118.48
liver, neonate N30.CNhs11106.1382-42D114.96
lung, adult.CNhs10474.28-22B17.39
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F81.63
lung, embryo E15.CNhs11020.432-17C51.87
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A63.35
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E57.09
lung, neonate N07.CNhs11111.715-19A37.31
lung, neonate N10.CNhs11219.750-23E67.18
lung, neonate N20.CNhs11109.822-18A47.87
lung, neonate N25.CNhs11119.1359-25C77.60
lung, neonate N30.CNhs11133.1394-42H29.26
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H215.73
medulla oblongata, adult.CNhs10477.17-12C219.59
medulla oblongata, neonate N30.CNhs11200.1396-42A322.74
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C73.44
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.28
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.90
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E310.77
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D711.23
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D815.15
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D913.87
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D410.12
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D66.72
olfactory brain, adult.CNhs10489.18-22I912.85
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I43.91
oviduct, adult pregnant day01.CNhs10500.988-6G66.76
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G84.77
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F52.14
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I70.47
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F835.51
skin, adult.CNhs10492.30-1C310.88
skin, neonate N00.CNhs11124.650-25G46.30
skin, neonate N03.CNhs11215.662-22H37.42
skin, neonate N06.CNhs11097.693-20I511.82
skin, neonate N10.CNhs11108.762-6C421.34
small intestine, neonate N16.CNhs11114.790-21I14.37
spinal cord, adult.CNhs10505.24-13C920.40
spleen, adult.CNhs10465.25-2G21.37
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.41
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D53.14
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A95.54
stomach, neonate N25.CNhs11104.1355-25E47.07
stomach, neonate N30.CNhs11134.1386-42I15.31
submandibular gland, adult.CNhs10469.59-29C111.18
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.90
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G52.14
testis, embryo E17.CNhs11029.486-18I53.10
testis, embryo E18.CNhs11027.503-18G53.38
testis, neonate N00.CNhs11189.1300-22B75.05
testis, neonate N07.CNhs11222.726-26I43.78
testis, neonate N10.CNhs11204.763-44D93.04
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E21.73
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I21.95
thymus, embryo E16.CNhs11002.456-26C50.39
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.40
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.58
tongue, adult.CNhs10499.32-1B42.27
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E44.06
uterus, adult pregnant day19.CNhs10497.590-15F52.63
uterus, adult.CNhs10509.92-27E54.21
vagina, adult.CNhs10502.89-27D55.14
vesicular gland, adult.CNhs10491.51-27F825.08
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.86
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A215.65
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A315.47
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A515.11
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.96
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A819.49
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.64
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C91.60
whole body, embryo E13.CNhs10512.372-23H23.59
whole body, embryo E14.5.CNhs10578.420-27D26.56
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F24.60
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.34
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.87
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.14
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.42
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.08
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.18
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.72
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.16
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.10
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I55.50
whole body, embryo E18.CNhs10516.493-3B34.44
whole body, neonate N00.CNhs10525.657-19C24.51
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D14.63
whole body, neonate N10.CNhs10518.761-6B44.87





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
electrically responsive cell3.81e-1039
electrically active cell3.81e-1039
neuron4.76e-1033
neuronal stem cell4.76e-1033
neuroblast4.76e-1033
electrically signaling cell4.76e-1033
CNS neuron (sensu Vertebrata)3.03e-0823
neuroblast (sensu Vertebrata)3.03e-0823

Uber anatomy
Ontology termp-valuen
ectoderm-derived structure2.45e-1795
ectoderm2.45e-1795
presumptive ectoderm2.45e-1795
ecto-epithelium1.30e-1573
central nervous system4.29e-1573
nervous system3.14e-1475
gray matter5.78e-1434
regional part of nervous system4.24e-1354
neurectoderm1.61e-1264
neural plate1.61e-1264
presumptive neural plate1.61e-1264
brain grey matter3.61e-1229
regional part of telencephalon3.61e-1229
telencephalon3.61e-1229
neural tube4.45e-1252
neural rod4.45e-1252
future spinal cord4.45e-1252
neural keel4.45e-1252
brain3.27e-1047
future brain3.27e-1047
cerebral cortex4.76e-1021
cerebral hemisphere4.76e-1021
pallium4.76e-1021
regional part of brain9.09e-1046
anatomical conduit2.42e-09122
pre-chordal neural plate3.35e-0949
anterior neural tube6.54e-0940
structure with developmental contribution from neural crest1.67e-0892
regional part of forebrain2.12e-0839
forebrain2.12e-0839
future forebrain2.12e-0839
regional part of cerebral cortex5.62e-0817
tube8.18e-08114
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