FFCP PHASE1:Mm9::chr11:115941577..115941588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:115941577..115941588,- | |||
|description=CAGE_peak_at_chr11:115941577..115941588,- | |description=CAGE_peak_at_chr11:115941577..115941588,- | ||
|id=chr11:115941577..115941588,- | |id=chr11:115941577..115941588,- | ||
|ontology_enrichment_celltype=CL:0002319!3.37e-07!43 | |ontology_enrichment_celltype=CL:0002319!3.37e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.11e-08,23;CL:0000337,1.11e-08,23;CL:0002610,1.12e-08,3;CL:0002319,5.19e-08,43;CL:0000221,9.27e-08,44;CL:0000133,9.27e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.20e-15!73;UBERON:0005743!4.20e-15!73;UBERON:0000073!3.15e-14!75;UBERON:0001016!3.15e-14!75;UBERON:0004121!3.19e-13!102;UBERON:0000924!3.19e-13!102;UBERON:0006601!3.19e-13!102;UBERON:0001049!1.43e-11!52;UBERON:0005068!1.43e-11!52;UBERON:0006241!1.43e-11!52;UBERON:0007135!1.43e-11!52;UBERON:0000955!1.47e-11!50;UBERON:0006238!1.47e-11!50;UBERON:0002616!6.19e-11!49;UBERON:0000033!9.53e-10!63;UBERON:0002346!1.13e-09!71;UBERON:0003075!1.13e-09!71;UBERON:0007284!1.13e-09!71;UBERON:0002020!5.24e-08!34;UBERON:0003076!5.03e-07!12;UBERON:0003057!5.03e-07!12 | |ontology_enrichment_uberon=UBERON:0001017!4.20e-15!73;UBERON:0005743!4.20e-15!73;UBERON:0000073!3.15e-14!75;UBERON:0001016!3.15e-14!75;UBERON:0004121!3.19e-13!102;UBERON:0000924!3.19e-13!102;UBERON:0006601!3.19e-13!102;UBERON:0001049!1.43e-11!52;UBERON:0005068!1.43e-11!52;UBERON:0006241!1.43e-11!52;UBERON:0007135!1.43e-11!52;UBERON:0000955!1.47e-11!50;UBERON:0006238!1.47e-11!50;UBERON:0002616!6.19e-11!49;UBERON:0000033!9.53e-10!63;UBERON:0002346!1.13e-09!71;UBERON:0003075!1.13e-09!71;UBERON:0007284!1.13e-09!71;UBERON:0002020!5.24e-08!34;UBERON:0003076!5.03e-07!12;UBERON:0003057!5.03e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.69e-16,73;UBERON:0000073,2.72e-16,54;UBERON:0001016,6.76e-16,75;UBERON:0004121,1.35e-13,95;UBERON:0000924,1.35e-13,95;UBERON:0006601,1.35e-13,95;UBERON:0000955,4.00e-12,47;UBERON:0006238,4.00e-12,47;UBERON:0001049,7.78e-12,52;UBERON:0005068,7.78e-12,52;UBERON:0006241,7.78e-12,52;UBERON:0007135,7.78e-12,52;UBERON:0002616,8.71e-11,46;UBERON:0002346,6.73e-10,64;UBERON:0003075,6.73e-10,64;UBERON:0007284,6.73e-10,64;UBERON:0002020,7.38e-09,34;UBERON:0004684,1.12e-08,3;UBERON:0002275,1.12e-08,3;UBERON:0003080,2.63e-08,40;UBERON:0010371,4.00e-08,73;UBERON:0002021,7.56e-08,10;UBERON:0000411,7.56e-08,10;UBERON:0001950,7.56e-08,10;UBERON:0003528,1.40e-07,29;UBERON:0002791,1.40e-07,29;UBERON:0001893,1.40e-07,29;UBERON:0002780,2.67e-07,39;UBERON:0001890,2.67e-07,39;UBERON:0006240,2.67e-07,39;UBERON:0003056,2.98e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,1.39912375625629,0,0.274228867211478,0,0.595303031057488,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,1.90509202037889,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.304130793658544,0.183546752161682,2.34717403304412,1.30815093828268,0.659058548203415,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0.404632921719196,2.11596391708813,0.633831403506179,1.0165335962074,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.599200221036809,2.30530983192933,0.414758449233911,1.08004750665353,0.420649922702764,0.285650984403804,1.32521124570968,0.122490799214954,0.575072826109418,0,3.30347642998166,2.42605942361857,2.30409799884365,0.527545150920775,1.00636407962651,0,3.07101298901519,0,1.37518422999129,1.76777151284201,0.711858403995515,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0,0,0.461230994512117,0,0.117588707135705,0.125666591329675,1.48316980640624,0.289198713839823,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0,0,0,1.3481157546434,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,1.66230435647648,0.486723789203273,0,0.124406970610093,0.758168275301024,1.05220927943237,0.390361328888111,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.512454881139399,0.187403449119458,0.517406741478031,0.215567992932842,0.378212160335639,0,0.657587197282725,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0,0.617068451549513,0,0,0,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,2.52347938276953,0.308713837137853,0,0,0.213288250535234,0,0.257734922644187,1.21010114774006,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.432276099749388,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0.241177159752417,0,0.287696137450811,0.648540907100142,0,0,0.744281895337007,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0.491764273019036,0.551873492609465,1.44495530989013,0.703270119553219,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0,3.53453448063988,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.938686832254841,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0.328281799490123,0,0.741701208042039,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0.259229946583586,0,2.25477175473676,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0,0,0.483168241652012,0.576060012515731,0.316011120628178,0,0,0,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0,0.226730383615211,0,0.358855426437903,0.335769232728157,0.579568782096571,0,0.183151624267265,0.214368379079066,1.50471631210609,0.564751842617067,2.76195141904306,1.14579102687879,1.03111909406213,0,2.2661816921691,0.675022500231806,1.35096360967266,1.35942722695261,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.114870937911227,0.476293691283074,0,0.578727661391115,0,0,0.685738504770831,0,0,0,0.282328141245992,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0.499621155875892,0,0.859484216193193,0.57386499620653,0.220591419119515,0 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|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0.171200729931206,0.0874204024189974,0,0,1.39912375625629,0,0.274228867211478,0,0.595303031057488,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0.215471232685889,0,0,0,1.90509202037889,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.304130793658544,0.183546752161682,2.34717403304412,1.30815093828268,0.659058548203415,0.58328969722285,0.55994568650145,1.43752564364972,0,0,0.336093799142464,0.514518872071894,0.286533439938757,0,0.404632921719196,2.11596391708813,0.633831403506179,1.0165335962074,0.889294796111139,0.899899717281399,2.96659908770092,0.7104801149461,0.599200221036809,2.30530983192933,0.414758449233911,1.08004750665353,0.420649922702764,0.285650984403804,1.32521124570968,0.122490799214954,0.575072826109418,0,3.30347642998166,2.42605942361857,2.30409799884365,0.527545150920775,1.00636407962651,0,3.07101298901519,0,1.37518422999129,1.76777151284201,0.711858403995515,0.931997229126503,0.075726193333184,0,0.289864488701678,0,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.421333260395256,0.340860645156116,0,0,0,0,0,0,0.216491041011214,0,0,0.5709193985953,0.258937883647172,0.29688427812965,0,0,0.461230994512117,0,0.117588707135705,0.125666591329675,1.48316980640624,0.289198713839823,0,0.161766849947409,0.662524555381181,0.484875253135222,0,0.878342391034642,0.83778682725382,0,0,0,0,1.3481157546434,0.457500602818626,0.125654352112864,0.695297280769106,0.511430914660661,1.66230435647648,0.486723789203273,0,0.124406970610093,0.758168275301024,1.05220927943237,0.390361328888111,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.512454881139399,0.187403449119458,0.517406741478031,0.215567992932842,0.378212160335639,0,0.657587197282725,0,0.348252166522167,0.205782136407943,0.199034266818493,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.473489471170421,0,0.617068451549513,0,0,0,0,0.164167464079095,0.243206428637567,0,0.219550115291051,0.134206418760372,2.52347938276953,0.308713837137853,0,0,0.213288250535234,0,0.257734922644187,1.21010114774006,0.22237804384487,0.570676878337677,0.474529061544512,0.494096864172033,0.251335208800269,0.397912944082302,0,0,0.432276099749388,0,0.189667900953082,0,0,0.203651327845314,0.193952487167626,0.140271639780637,0.189709611372772,0.295220295959204,0.31399745568275,0.246794327843601,0,0.166845105716094,0,0.674586337154561,0.202860121388503,0.241177159752417,0,0.287696137450811,0.648540907100142,0,0,0.744281895337007,0,0.252578877947112,0.538192240565737,0,0,0,0,0,0,0,0.476087281772027,0.390267295715598,0.157635144106191,0.221464689648775,0.318909537314974,0.327726629431476,0,0,0,0,0.491764273019036,0.551873492609465,1.44495530989013,0.703270119553219,0,0.252470927204373,0.315508219416257,0,0.430846795465598,0.238968797952552,0.222798674082394,0.283076530788832,0,0.292255857911312,0,3.53453448063988,0.283880170416537,0.178065603667255,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,1.02131881726136,0,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0.304464949114599,0.938686832254841,0.21183207086382,0.220528398054962,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0.328281799490123,0,0.741701208042039,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0,0.165306911450672,0,0.259229946583586,0,2.25477175473676,0.149516546043979,0,0.194451188344048,0,0.337912250981556,0.352071715937262,0,0,0.483168241652012,0.576060012515731,0.316011120628178,0,0,0,0.358053391334963,0.39736270956253,0.240390899039938,0.295379054349154,0.201932899896295,0.0762068066549998,0.302478555410522,0.0974578807397524,0,0,0.226730383615211,0,0.358855426437903,0.335769232728157,0.579568782096571,0,0.183151624267265,0.214368379079066,1.50471631210609,0.564751842617067,2.76195141904306,1.14579102687879,1.03111909406213,0,2.2661816921691,0.675022500231806,1.35096360967266,1.35942722695261,0,0,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.192075457214608,0.114870937911227,0.476293691283074,0,0.578727661391115,0,0,0.685738504770831,0,0,0,0.282328141245992,0,0,0,0,0,0,0.0985044823755635,0,0.309873682371932,0,0.499621155875892,0,0.859484216193193,0.57386499620653,0.220591419119515,0 | ||
|short_description=p@chr11:115941577..115941588,- | |short_description=p@chr11:115941577..115941588,- | ||
}} | }} |
Latest revision as of 11:38, 5 August 2015
Short description: | p@chr11:115941577..115941588, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:115941577..115941588, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.11e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-08 | 23 |
raphe nuclei neuron | 1.12e-08 | 3 |
neural cell | 5.19e-08 | 43 |
ectodermal cell | 9.27e-08 | 44 |
neurectodermal cell | 9.27e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.69e-16 | 73 |
regional part of nervous system | 2.72e-16 | 54 |
nervous system | 6.76e-16 | 75 |
ectoderm-derived structure | 1.35e-13 | 95 |
ectoderm | 1.35e-13 | 95 |
presumptive ectoderm | 1.35e-13 | 95 |
brain | 4.00e-12 | 47 |
future brain | 4.00e-12 | 47 |
neural tube | 7.78e-12 | 52 |
neural rod | 7.78e-12 | 52 |
future spinal cord | 7.78e-12 | 52 |
neural keel | 7.78e-12 | 52 |
regional part of brain | 8.71e-11 | 46 |
neurectoderm | 6.73e-10 | 64 |
neural plate | 6.73e-10 | 64 |
presumptive neural plate | 6.73e-10 | 64 |
gray matter | 7.38e-09 | 34 |
raphe nuclei | 1.12e-08 | 3 |
reticular formation | 1.12e-08 | 3 |
anterior neural tube | 2.63e-08 | 40 |
ecto-epithelium | 4.00e-08 | 73 |
occipital lobe | 7.56e-08 | 10 |
visual cortex | 7.56e-08 | 10 |
neocortex | 7.56e-08 | 10 |
brain grey matter | 1.40e-07 | 29 |
regional part of telencephalon | 1.40e-07 | 29 |
telencephalon | 1.40e-07 | 29 |
regional part of forebrain | 2.67e-07 | 39 |
forebrain | 2.67e-07 | 39 |
future forebrain | 2.67e-07 | 39 |
pre-chordal neural plate | 2.98e-07 | 49 |