FFCP PHASE1:Mm9::chr11:120645571..120645586,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=209318 | |EntrezGene=209318 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3MIA8,B1ATU4 | |UniProt=Q3MIA8,B1ATU4 | ||
|association_with_transcript=0bp_to_ENSMUST00000132422,NM_001177874,uc007muo.2,uc007mup.2_5end | |association_with_transcript=0bp_to_ENSMUST00000132422,NM_001177874,uc007muo.2,uc007mup.2_5end | ||
|cluster_id=chr11:120645571..120645586,+ | |||
|description=CAGE_peak_2_at_Gps1_5end | |description=CAGE_peak_2_at_Gps1_5end | ||
|id=chr11:120645571..120645586,+ | |id=chr11:120645571..120645586,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.36e-18!50;CL:0000221!1.70e-17!44;CL:0000133!1.70e-17!44;CL:0002319!4.84e-17!43;CL:0000393!3.01e-13!39;CL:0000211!3.01e-13!39;CL:0000540!2.54e-12!33;CL:0000047!2.54e-12!33;CL:0000031!2.54e-12!33;CL:0000404!2.54e-12!33;CL:0000117!2.30e-09!23;CL:0000337!2.30e-09!23 | |ontology_enrichment_celltype=CL:0000055!3.36e-18!50;CL:0000221!1.70e-17!44;CL:0000133!1.70e-17!44;CL:0002319!4.84e-17!43;CL:0000393!3.01e-13!39;CL:0000211!3.01e-13!39;CL:0000540!2.54e-12!33;CL:0000047!2.54e-12!33;CL:0000031!2.54e-12!33;CL:0000404!2.54e-12!33;CL:0000117!2.30e-09!23;CL:0000337!2.30e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.44e-17,44;CL:0000133,1.44e-17,44;CL:0002319,4.11e-17,43;CL:0000393,2.60e-13,39;CL:0000211,2.60e-13,39;CL:0000540,2.19e-12,33;CL:0000047,2.19e-12,33;CL:0000031,2.19e-12,33;CL:0000404,2.19e-12,33;CL:0000117,1.99e-09,23;CL:0000337,1.99e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.39e-24!75;UBERON:0001016!3.39e-24!75;UBERON:0001017!2.89e-23!73;UBERON:0005743!2.89e-23!73;UBERON:0004121!1.76e-21!102;UBERON:0000924!1.76e-21!102;UBERON:0006601!1.76e-21!102;UBERON:0002346!5.58e-20!71;UBERON:0003075!5.58e-20!71;UBERON:0007284!5.58e-20!71;UBERON:0001049!1.18e-15!52;UBERON:0005068!1.18e-15!52;UBERON:0006241!1.18e-15!52;UBERON:0007135!1.18e-15!52;UBERON:0000033!9.42e-14!63;UBERON:0000955!3.37e-13!50;UBERON:0006238!3.37e-13!50;UBERON:0002020!8.45e-13!34;UBERON:0002616!1.02e-12!49;UBERON:0003056!1.31e-12!49;UBERON:0003080!2.16e-11!40;UBERON:0002780!2.94e-11!39;UBERON:0001890!2.94e-11!39;UBERON:0006240!2.94e-11!39;UBERON:0002791!6.38e-11!29;UBERON:0003528!6.38e-11!29;UBERON:0001893!6.38e-11!29;UBERON:0000025!2.95e-08!114;UBERON:0000956!1.13e-07!21;UBERON:0001869!1.13e-07!21;UBERON:0000203!1.13e-07!21;UBERON:0004111!1.19e-07!122 | |ontology_enrichment_uberon=UBERON:0000073!3.39e-24!75;UBERON:0001016!3.39e-24!75;UBERON:0001017!2.89e-23!73;UBERON:0005743!2.89e-23!73;UBERON:0004121!1.76e-21!102;UBERON:0000924!1.76e-21!102;UBERON:0006601!1.76e-21!102;UBERON:0002346!5.58e-20!71;UBERON:0003075!5.58e-20!71;UBERON:0007284!5.58e-20!71;UBERON:0001049!1.18e-15!52;UBERON:0005068!1.18e-15!52;UBERON:0006241!1.18e-15!52;UBERON:0007135!1.18e-15!52;UBERON:0000033!9.42e-14!63;UBERON:0000955!3.37e-13!50;UBERON:0006238!3.37e-13!50;UBERON:0002020!8.45e-13!34;UBERON:0002616!1.02e-12!49;UBERON:0003056!1.31e-12!49;UBERON:0003080!2.16e-11!40;UBERON:0002780!2.94e-11!39;UBERON:0001890!2.94e-11!39;UBERON:0006240!2.94e-11!39;UBERON:0002791!6.38e-11!29;UBERON:0003528!6.38e-11!29;UBERON:0001893!6.38e-11!29;UBERON:0000025!2.95e-08!114;UBERON:0000956!1.13e-07!21;UBERON:0001869!1.13e-07!21;UBERON:0000203!1.13e-07!21;UBERON:0004111!1.19e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.87e-24,75;UBERON:0001017,2.46e-23,73;UBERON:0010314,2.50e-21,92;UBERON:0004121,6.41e-20,95;UBERON:0000924,6.41e-20,95;UBERON:0006601,6.41e-20,95;UBERON:0002346,1.14e-18,64;UBERON:0003075,1.14e-18,64;UBERON:0007284,1.14e-18,64;UBERON:0001049,1.16e-15,52;UBERON:0005068,1.16e-15,52;UBERON:0006241,1.16e-15,52;UBERON:0007135,1.16e-15,52;UBERON:0010371,5.72e-15,73;UBERON:0000073,1.03e-14,54;UBERON:0000955,1.02e-13,47;UBERON:0006238,1.02e-13,47;UBERON:0002616,3.14e-13,46;UBERON:0002020,8.34e-13,34;UBERON:0003056,1.29e-12,49;UBERON:0003080,2.14e-11,40;UBERON:0002780,2.91e-11,39;UBERON:0001890,2.91e-11,39;UBERON:0006240,2.91e-11,39;UBERON:0003528,6.31e-11,29;UBERON:0002791,6.31e-11,29;UBERON:0001893,6.31e-11,29;UBERON:0000025,3.33e-08,114;UBERON:0000956,1.12e-07,21;UBERON:0001869,1.12e-07,21;UBERON:0000203,1.12e-07,21;UBERON:0004111,1.33e-07,122 | |||
|phase1_expression=4.00372117761985,0.697950815278722,0,0.60492842261366,0,0.671517087647559,0.700837921786577,2.06597317506522,1.267098499365,1.63845168425395,1.88339765048055,2.55270908785077,2.9104124088305,1.48614684112296,2.6648780945253,2.42970320867791,2.79824751251259,2.5236973228659,3.01651753932625,1.27316895539409,2.55129870453209,3.27660138962921,2.87319768052829,1.11994695955385,1.83527424853736,0.57423196411502,0.86152399231815,1.07735616342945,0.190023419456374,2.01624103807945,1.33038306393183,3.81018404075779,3.07532393792285,0,2.3108129580102,2.32728503501889,0.816677425049476,0.418531630736908,4.6880120671428,2.61761871986899,4.1176204162171,0.683045484958446,1.94204141212461,3.9028013572429,4.66333883609767,4.77221555620372,5.47673941043627,5.88667922227206,6.37089929929968,5.24960727500565,6.99932108126813,8.62515386189829,1.00669563634642,2.90144856804538,1.00828139742739,3.60163210450326,6.30373567865265,3.6097046459421,8.09265843438391,6.34789175126439,7.60597684207415,7.11573517345177,3.55717918444456,4.94944844504769,5.93319817540185,4.9733608046227,5.69240209984969,5.37905627450176,9.12468588314603,8.91039192989158,8.41299845405528,9.42648248532552,7.50953039235486,6.73699395682247,9.39285615978716,2.75765635983006,0,5.74593021383345,3.84016333140609,9.49581271657396,7.31901148819277,8.33461392890816,3.35019598801657,6.75315132038016,6.41752640662602,2.65165726926301,6.40672563595963,7.08317894136142,5.60373830665562,5.29000920747499,2.89864488701678,4.30211938490693,3.39985666853875,1.61910957491345,0.649776417447669,0.448026887097336,1.96622188184453,3.06774580640504,3.89679006904303,5.65343319216544,5.63373679106722,1.28326477414318,2.54805239706646,0,2.38140145112336,1.01343946190039,1.51657333504435,1.25602267690966,1.29468941823586,2.9688427812965,6.41895709034703,4.26251669636998,5.76538743140146,3.76806601381556,3.29248379979973,4.52399728786832,2.22475470960936,1.44599356919912,4.42305275974937,3.558870698843,3.75430581382669,2.42437626567611,0,4.09893115816166,4.81727425670947,1.27728527604296,2.87556298814209,5.99902730993408,3.30382590389968,4.19413790333504,3.66000482254901,6.53402630986895,6.25767552692195,3.83573185995496,7.2725815595846,5.02947915510049,5.70300437561771,2.61254638281195,4.0435641349388,2.10441855886474,3.12289063110489,7.35686734187113,5.58192602396583,2.86339153887859,4.21826294738233,4.99643509110914,6.46541899462129,4.9153640440413,3.66465587985832,4.34943984385984,2.63926686245923,5.2606975782618,1.94633074457919,2.089512999133,2.46938563689532,5.37392520409932,1.40442637462647,2.83082697826187,1.70498099637356,5.17814431338755,3.28336483973535,4.50155153652537,2.3674473558521,3.73852040320067,4.9365476123961,2.09280550275367,4.02410102099429,5.3712057488898,4.77223564749093,3.2833492815819,3.72916523910936,2.92399974850665,3.29325172936576,3.35516046900929,6.72927835405207,8.84979666461846,0.660837565967596,1.05780226665418,5.33220626338085,4.87697010906921,2.83508414908605,2.42020229548011,2.00140239460383,3.99473814836374,0.474529061544512,1.4822905925161,2.01068167040216,1.98956472041151,4.28920991662064,0.898819408654221,1.72910439899755,0.796565093017469,5.69003702859245,3.77020091612105,5.63538678365402,3.25842124552503,2.32742984601151,4.06787755363848,2.90888070771584,1.91893192373483,2.98297582898612,2.34454611451421,0.889357881261447,2.00214126859313,2.94838492669805,2.69834534861824,1.42002084971952,1.92941727801933,2.29163266603278,1.72617682470486,0.972811360650212,4.3929826110093,0,3.34926852901653,2.49630138491648,2.27320990152401,1.07638448113147,0.964887042726734,2.58654466233247,5.49525094134406,5.54080919902888,3.22515662972857,2.58159273117352,2.84760637651087,2.61848004974615,4.29294025287157,4.25614889086716,2.21464689648775,4.14582398509466,2.78567635016755,2.24490476425664,2.31438493730419,1.50791283939272,2.71952841909355,0.491764273019036,2.20749397043786,4.81651769963376,4.92289083687253,6.22952792431367,5.30188947129183,6.62567260774139,5.85658116444958,6.89354872744957,4.30143836314594,6.68396022247182,5.09537755419898,3.64329631507405,4.67609372658099,4.34816555741176,6.10510501201433,2.83880170416537,5.1639025063504,6.51547837414304,3.62934270539578,2.65490276679926,2.6705869977048,3.62788268357701,1.32023555829129,2.65771703592696,1.84461088766356,3.10113951801865,1.45413491791002,1.42598951353889,1.8962205476149,1.05418608574999,1.03135543248187,3.06395645178409,5.58189391497062,4.01011919726539,3.42939256050548,2.48276327099183,2.67553226403106,4.44282355625727,3.95804433848979,3.75474732901937,3.38931313382112,1.98475558249466,0.8244312647074,1.61464426695906,2.77439454669517,2.74556391207214,2.46211349617592,1.1659233465194,5.7481843623258,3.07567585436135,3.09580301944834,1.66675074632741,2.44878994106098,0.820165366326151,2.74533807847827,2.54967644990783,2.37917468950219,2.76399947608848,1.90934123603023,4.27053591334533,3.25311147402958,3.56417624711944,2.71814784818809,2.62035076495413,2.96701562046606,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| |phase1_expression=4.00372117761985,0.697950815278722,0,0.60492842261366,0,0.671517087647559,0.700837921786577,2.06597317506522,1.267098499365,1.63845168425395,1.88339765048055,2.55270908785077,2.9104124088305,1.48614684112296,2.6648780945253,2.42970320867791,2.79824751251259,2.5236973228659,3.01651753932625,1.27316895539409,2.55129870453209,3.27660138962921,2.87319768052829,1.11994695955385,1.83527424853736,0.57423196411502,0.86152399231815,1.07735616342945,0.190023419456374,2.01624103807945,1.33038306393183,3.81018404075779,3.07532393792285,0,2.3108129580102,2.32728503501889,0.816677425049476,0.418531630736908,4.6880120671428,2.61761871986899,4.1176204162171,0.683045484958446,1.94204141212461,3.9028013572429,4.66333883609767,4.77221555620372,5.47673941043627,5.88667922227206,6.37089929929968,5.24960727500565,6.99932108126813,8.62515386189829,1.00669563634642,2.90144856804538,1.00828139742739,3.60163210450326,6.30373567865265,3.6097046459421,8.09265843438391,6.34789175126439,7.60597684207415,7.11573517345177,3.55717918444456,4.94944844504769,5.93319817540185,4.9733608046227,5.69240209984969,5.37905627450176,9.12468588314603,8.91039192989158,8.41299845405528,9.42648248532552,7.50953039235486,6.73699395682247,9.39285615978716,2.75765635983006,0,5.74593021383345,3.84016333140609,9.49581271657396,7.31901148819277,8.33461392890816,3.35019598801657,6.75315132038016,6.41752640662602,2.65165726926301,6.40672563595963,7.08317894136142,5.60373830665562,5.29000920747499,2.89864488701678,4.30211938490693,3.39985666853875,1.61910957491345,0.649776417447669,0.448026887097336,1.96622188184453,3.06774580640504,3.89679006904303,5.65343319216544,5.63373679106722,1.28326477414318,2.54805239706646,0,2.38140145112336,1.01343946190039,1.51657333504435,1.25602267690966,1.29468941823586,2.9688427812965,6.41895709034703,4.26251669636998,5.76538743140146,3.76806601381556,3.29248379979973,4.52399728786832,2.22475470960936,1.44599356919912,4.42305275974937,3.558870698843,3.75430581382669,2.42437626567611,0,4.09893115816166,4.81727425670947,1.27728527604296,2.87556298814209,5.99902730993408,3.30382590389968,4.19413790333504,3.66000482254901,6.53402630986895,6.25767552692195,3.83573185995496,7.2725815595846,5.02947915510049,5.70300437561771,2.61254638281195,4.0435641349388,2.10441855886474,3.12289063110489,7.35686734187113,5.58192602396583,2.86339153887859,4.21826294738233,4.99643509110914,6.46541899462129,4.9153640440413,3.66465587985832,4.34943984385984,2.63926686245923,5.2606975782618,1.94633074457919,2.089512999133,2.46938563689532,5.37392520409932,1.40442637462647,2.83082697826187,1.70498099637356,5.17814431338755,3.28336483973535,4.50155153652537,2.3674473558521,3.73852040320067,4.9365476123961,2.09280550275367,4.02410102099429,5.3712057488898,4.77223564749093,3.2833492815819,3.72916523910936,2.92399974850665,3.29325172936576,3.35516046900929,6.72927835405207,8.84979666461846,0.660837565967596,1.05780226665418,5.33220626338085,4.87697010906921,2.83508414908605,2.42020229548011,2.00140239460383,3.99473814836374,0.474529061544512,1.4822905925161,2.01068167040216,1.98956472041151,4.28920991662064,0.898819408654221,1.72910439899755,0.796565093017469,5.69003702859245,3.77020091612105,5.63538678365402,3.25842124552503,2.32742984601151,4.06787755363848,2.90888070771584,1.91893192373483,2.98297582898612,2.34454611451421,0.889357881261447,2.00214126859313,2.94838492669805,2.69834534861824,1.42002084971952,1.92941727801933,2.29163266603278,1.72617682470486,0.972811360650212,4.3929826110093,0,3.34926852901653,2.49630138491648,2.27320990152401,1.07638448113147,0.964887042726734,2.58654466233247,5.49525094134406,5.54080919902888,3.22515662972857,2.58159273117352,2.84760637651087,2.61848004974615,4.29294025287157,4.25614889086716,2.21464689648775,4.14582398509466,2.78567635016755,2.24490476425664,2.31438493730419,1.50791283939272,2.71952841909355,0.491764273019036,2.20749397043786,4.81651769963376,4.92289083687253,6.22952792431367,5.30188947129183,6.62567260774139,5.85658116444958,6.89354872744957,4.30143836314594,6.68396022247182,5.09537755419898,3.64329631507405,4.67609372658099,4.34816555741176,6.10510501201433,2.83880170416537,5.1639025063504,6.51547837414304,3.62934270539578,2.65490276679926,2.6705869977048,3.62788268357701,1.32023555829129,2.65771703592696,1.84461088766356,3.10113951801865,1.45413491791002,1.42598951353889,1.8962205476149,1.05418608574999,1.03135543248187,3.06395645178409,5.58189391497062,4.01011919726539,3.42939256050548,2.48276327099183,2.67553226403106,4.44282355625727,3.95804433848979,3.75474732901937,3.38931313382112,1.98475558249466,0.8244312647074,1.61464426695906,2.77439454669517,2.74556391207214,2.46211349617592,1.1659233465194,5.7481843623258,3.07567585436135,3.09580301944834,1.66675074632741,2.44878994106098,0.820165366326151,2.74533807847827,2.54967644990783,2.37917468950219,2.76399947608848,1.90934123603023,4.27053591334533,3.25311147402958,3.56417624711944,2.71814784818809,2.62035076495413,2.96701562046606,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| ||
|short_description=p2@Gps1 | |short_description=p2@Gps1 | ||
}} | }} |
Latest revision as of 03:29, 27 September 2015
Short description: | p2@Gps1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gps1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000132422, NM_001177874, uc007muo.2, uc007mup.2_5end |
EntrezGene: | Gps1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.44e-17 | 44 |
neurectodermal cell | 1.44e-17 | 44 |
neural cell | 4.11e-17 | 43 |
electrically responsive cell | 2.60e-13 | 39 |
electrically active cell | 2.60e-13 | 39 |
neuron | 2.19e-12 | 33 |
neuronal stem cell | 2.19e-12 | 33 |
neuroblast | 2.19e-12 | 33 |
electrically signaling cell | 2.19e-12 | 33 |
CNS neuron (sensu Vertebrata) | 1.99e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.99e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.87e-24 | 75 |
central nervous system | 2.46e-23 | 73 |
structure with developmental contribution from neural crest | 2.50e-21 | 92 |
ectoderm-derived structure | 6.41e-20 | 95 |
ectoderm | 6.41e-20 | 95 |
presumptive ectoderm | 6.41e-20 | 95 |
neurectoderm | 1.14e-18 | 64 |
neural plate | 1.14e-18 | 64 |
presumptive neural plate | 1.14e-18 | 64 |
neural tube | 1.16e-15 | 52 |
neural rod | 1.16e-15 | 52 |
future spinal cord | 1.16e-15 | 52 |
neural keel | 1.16e-15 | 52 |
ecto-epithelium | 5.72e-15 | 73 |
regional part of nervous system | 1.03e-14 | 54 |
brain | 1.02e-13 | 47 |
future brain | 1.02e-13 | 47 |
regional part of brain | 3.14e-13 | 46 |
gray matter | 8.34e-13 | 34 |
pre-chordal neural plate | 1.29e-12 | 49 |
anterior neural tube | 2.14e-11 | 40 |
regional part of forebrain | 2.91e-11 | 39 |
forebrain | 2.91e-11 | 39 |
future forebrain | 2.91e-11 | 39 |
brain grey matter | 6.31e-11 | 29 |
regional part of telencephalon | 6.31e-11 | 29 |
telencephalon | 6.31e-11 | 29 |
tube | 3.33e-08 | 114 |
cerebral cortex | 1.12e-07 | 21 |
cerebral hemisphere | 1.12e-07 | 21 |
pallium | 1.12e-07 | 21 |
anatomical conduit | 1.33e-07 | 122 |