FFCP PHASE1:Mm9::chr4:155266363..155266377,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140500 | |EntrezGene=140500 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENSMUST00000131168_5end | |association_with_transcript=-3bp_to_ENSMUST00000131168_5end | ||
|cluster_id=chr4:155266363..155266377,+ | |||
|description=CAGE_peak_1_at_Acap3_5end | |description=CAGE_peak_1_at_Acap3_5end | ||
|id=chr4:155266363..155266377,+ | |id=chr4:155266363..155266377,+ | ||
|ontology_enrichment_celltype=CL:0002319!4.90e-17!43;CL:0000221!1.08e-16!44;CL:0000133!1.08e-16!44;CL:0000540!1.19e-14!33;CL:0000047!1.19e-14!33;CL:0000031!1.19e-14!33;CL:0000404!1.19e-14!33;CL:0000055!1.15e-13!50;CL:0000393!4.65e-12!39;CL:0000211!4.65e-12!39;CL:0000117!6.32e-12!23;CL:0000337!6.32e-12!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.94e-17,43;CL:0000221,8.74e-17,44;CL:0000133,8.74e-17,44;CL:0000540,1.16e-14,33;CL:0000047,1.16e-14,33;CL:0000031,1.16e-14,33;CL:0000404,1.16e-14,33;CL:0000393,4.54e-12,39;CL:0000211,4.54e-12,39;CL:0000117,6.17e-12,23;CL:0000337,6.17e-12,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.50e-29!75;UBERON:0001016!2.50e-29!75;UBERON:0001017!4.54e-28!73;UBERON:0005743!4.54e-28!73;UBERON:0004121!6.81e-25!102;UBERON:0000924!6.81e-25!102;UBERON:0006601!6.81e-25!102;UBERON:0001049!2.16e-21!52;UBERON:0005068!2.16e-21!52;UBERON:0006241!2.16e-21!52;UBERON:0007135!2.16e-21!52;UBERON:0002020!1.07e-19!34;UBERON:0000955!1.70e-19!50;UBERON:0006238!1.70e-19!50;UBERON:0000033!4.28e-19!63;UBERON:0002616!7.16e-19!49;UBERON:0002346!1.32e-18!71;UBERON:0003075!1.32e-18!71;UBERON:0007284!1.32e-18!71;UBERON:0002791!5.53e-17!29;UBERON:0003528!5.53e-17!29;UBERON:0001893!5.53e-17!29;UBERON:0003080!3.44e-16!40;UBERON:0002780!7.73e-16!39;UBERON:0001890!7.73e-16!39;UBERON:0006240!7.73e-16!39;UBERON:0003056!2.21e-15!49;UBERON:0000956!1.90e-13!21;UBERON:0001869!1.90e-13!21;UBERON:0000203!1.90e-13!21;UBERON:0007811!5.47e-13!86;UBERON:0000153!1.36e-12!94;UBERON:0002619!7.54e-11!17;UBERON:0002021!5.24e-07!10;UBERON:0000411!5.24e-07!10;UBERON:0001950!5.24e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.94e-29,75;UBERON:0001017,3.54e-28,73;UBERON:0004121,1.10e-27,95;UBERON:0000924,1.10e-27,95;UBERON:0006601,1.10e-27,95;UBERON:0000073,1.04e-21,54;UBERON:0002346,1.16e-21,64;UBERON:0003075,1.16e-21,64;UBERON:0007284,1.16e-21,64;UBERON:0001049,2.06e-21,52;UBERON:0005068,2.06e-21,52;UBERON:0006241,2.06e-21,52;UBERON:0007135,2.06e-21,52;UBERON:0010371,3.01e-20,73;UBERON:0002020,1.03e-19,34;UBERON:0000955,8.62e-19,47;UBERON:0006238,8.62e-19,47;UBERON:0002616,3.61e-18,46;UBERON:0003528,5.34e-17,29;UBERON:0002791,5.34e-17,29;UBERON:0001893,5.34e-17,29;UBERON:0003080,3.33e-16,40;UBERON:0002780,7.49e-16,39;UBERON:0001890,7.49e-16,39;UBERON:0006240,7.49e-16,39;UBERON:0003056,2.15e-15,49;UBERON:0000956,1.85e-13,21;UBERON:0001869,1.85e-13,21;UBERON:0000203,1.85e-13,21;UBERON:0010314,1.90e-12,92;UBERON:0002619,7.39e-11,17;UBERON:0002021,5.18e-07,10;UBERON:0000411,5.18e-07,10;UBERON:0001950,5.18e-07,10 | |||
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| ||
|short_description=p1@Acap3 | |short_description=p1@Acap3 | ||
}} | }} |
Latest revision as of 20:22, 26 September 2015
Short description: | p1@Acap3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acap3_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENSMUST00000131168_5end |
EntrezGene: | Acap3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.94e-17 | 43 |
ectodermal cell | 8.74e-17 | 44 |
neurectodermal cell | 8.74e-17 | 44 |
neuron | 1.16e-14 | 33 |
neuronal stem cell | 1.16e-14 | 33 |
neuroblast | 1.16e-14 | 33 |
electrically signaling cell | 1.16e-14 | 33 |
electrically responsive cell | 4.54e-12 | 39 |
electrically active cell | 4.54e-12 | 39 |
CNS neuron (sensu Vertebrata) | 6.17e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.17e-12 | 23 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.94e-29 | 75 |
central nervous system | 3.54e-28 | 73 |
ectoderm-derived structure | 1.10e-27 | 95 |
ectoderm | 1.10e-27 | 95 |
presumptive ectoderm | 1.10e-27 | 95 |
regional part of nervous system | 1.04e-21 | 54 |
neurectoderm | 1.16e-21 | 64 |
neural plate | 1.16e-21 | 64 |
presumptive neural plate | 1.16e-21 | 64 |
neural tube | 2.06e-21 | 52 |
neural rod | 2.06e-21 | 52 |
future spinal cord | 2.06e-21 | 52 |
neural keel | 2.06e-21 | 52 |
ecto-epithelium | 3.01e-20 | 73 |
gray matter | 1.03e-19 | 34 |
brain | 8.62e-19 | 47 |
future brain | 8.62e-19 | 47 |
regional part of brain | 3.61e-18 | 46 |
brain grey matter | 5.34e-17 | 29 |
regional part of telencephalon | 5.34e-17 | 29 |
telencephalon | 5.34e-17 | 29 |
anterior neural tube | 3.33e-16 | 40 |
regional part of forebrain | 7.49e-16 | 39 |
forebrain | 7.49e-16 | 39 |
future forebrain | 7.49e-16 | 39 |
pre-chordal neural plate | 2.15e-15 | 49 |
cerebral cortex | 1.85e-13 | 21 |
cerebral hemisphere | 1.85e-13 | 21 |
pallium | 1.85e-13 | 21 |
structure with developmental contribution from neural crest | 1.90e-12 | 92 |
regional part of cerebral cortex | 7.39e-11 | 17 |
occipital lobe | 5.18e-07 | 10 |
visual cortex | 5.18e-07 | 10 |
neocortex | 5.18e-07 | 10 |