FFCP PHASE1:Mm9::chr2:26967521..26967534,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=135 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:26967521..26967534,- | |||
|description=CAGE_peak_at_chr2:26967521..26967534,- | |description=CAGE_peak_at_chr2:26967521..26967534,- | ||
|id=chr2:26967521..26967534,- | |id=chr2:26967521..26967534,- | ||
|ontology_enrichment_celltype=CL:0000117!5.88e-08!23;CL:0000337!5.88e-08!23 | |ontology_enrichment_celltype=CL:0000117!5.88e-08!23;CL:0000337!5.88e-08!23 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!5.36e-32!34;UBERON:0002791!3.28e-28!29;UBERON:0003528!3.28e-28!29;UBERON:0001893!3.28e-28!29;UBERON:0001049!5.22e-27!52;UBERON:0005068!5.22e-27!52;UBERON:0006241!5.22e-27!52;UBERON:0007135!5.22e-27!52;UBERON:0000955!3.52e-26!50;UBERON:0006238!3.52e-26!50;UBERON:0003080!8.44e-26!40;UBERON:0002021!1.87e-24!10;UBERON:0000411!1.87e-24!10;UBERON:0001950!1.87e-24!10;UBERON:0002616!2.36e-24!49;UBERON:0002780!4.20e-24!39;UBERON:0001890!4.20e-24!39;UBERON:0006240!4.20e-24!39;UBERON:0000956!5.70e-23!21;UBERON:0001869!5.70e-23!21;UBERON:0000203!5.70e-23!21;UBERON:0001017!1.02e-22!73;UBERON:0005743!1.02e-22!73;UBERON:0000073!6.28e-22!75;UBERON:0001016!6.28e-22!75;UBERON:0003056!4.98e-20!49;UBERON:0000033!1.73e-19!63;UBERON:0002619!6.22e-19!17;UBERON:0002346!4.62e-18!71;UBERON:0003075!4.62e-18!71;UBERON:0007284!4.62e-18!71;UBERON:0004121!1.05e-16!102;UBERON:0000924!1.05e-16!102;UBERON:0006601!1.05e-16!102;UBERON:0007811!3.90e-15!86;UBERON:0000153!2.73e-13!94;UBERON:0000064!6.25e-10!99;UBERON:0000025!7.24e-09!114;UBERON:0000475!2.15e-08!200;UBERON:0004111!7.01e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.07e-50,10;UBERON:0000411,1.07e-50,10;UBERON:0001950,1.07e-50,10;UBERON:0000956,3.39e-30,21;UBERON:0001869,3.39e-30,21;UBERON:0000203,3.39e-30,21;UBERON:0002619,1.02e-29,17;UBERON:0002020,8.75e-23,34;UBERON:0003528,9.64e-22,29;UBERON:0002791,9.64e-22,29;UBERON:0001893,9.64e-22,29;UBERON:0000955,2.01e-16,47;UBERON:0006238,2.01e-16,47;UBERON:0002780,4.94e-16,39;UBERON:0001890,4.94e-16,39;UBERON:0006240,4.94e-16,39;UBERON:0003080,1.28e-15,40;UBERON:0001049,1.09e-14,52;UBERON:0005068,1.09e-14,52;UBERON:0006241,1.09e-14,52;UBERON:0007135,1.09e-14,52;UBERON:0000073,4.04e-14,54;UBERON:0002616,1.67e-13,46;UBERON:0003056,1.22e-12,49;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0002346,8.34e-12,64;UBERON:0003075,8.34e-12,64;UBERON:0007284,8.34e-12,64;UBERON:0010371,2.94e-10,73;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0010314,5.64e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.42825492201902,0,0,0,0,0,0.638436690425939,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0,0.45839474333043,0.589257170947335,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,1.39059456153821,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,2.86447756719698,7.73339320546594,0.685082519770642,3.7769694869485,2.02506750069542,2.70192721934532,1.81256963593682,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,1.42825492201902,0,0,0,0,0,0.638436690425939,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0,0.45839474333043,0.589257170947335,0.569486723196412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449371918214468,0.457500602818626,0.125654352112864,1.39059456153821,0.767146371990992,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89189184779626,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,1.38097570952153,2.86447756719698,7.73339320546594,0.685082519770642,3.7769694869485,2.02506750069542,2.70192721934532,1.81256963593682,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290692833264657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:26967521..26967534,- | |short_description=p@chr2:26967521..26967534,- | ||
}} | }} |
Latest revision as of 22:09, 4 August 2015
Short description: | p@chr2:26967521..26967534, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:26967521..26967534, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.07e-50 | 10 |
visual cortex | 1.07e-50 | 10 |
neocortex | 1.07e-50 | 10 |
cerebral cortex | 3.39e-30 | 21 |
cerebral hemisphere | 3.39e-30 | 21 |
pallium | 3.39e-30 | 21 |
regional part of cerebral cortex | 1.02e-29 | 17 |
gray matter | 8.75e-23 | 34 |
brain grey matter | 9.64e-22 | 29 |
regional part of telencephalon | 9.64e-22 | 29 |
telencephalon | 9.64e-22 | 29 |
brain | 2.01e-16 | 47 |
future brain | 2.01e-16 | 47 |
regional part of forebrain | 4.94e-16 | 39 |
forebrain | 4.94e-16 | 39 |
future forebrain | 4.94e-16 | 39 |
anterior neural tube | 1.28e-15 | 40 |
neural tube | 1.09e-14 | 52 |
neural rod | 1.09e-14 | 52 |
future spinal cord | 1.09e-14 | 52 |
neural keel | 1.09e-14 | 52 |
regional part of nervous system | 4.04e-14 | 54 |
regional part of brain | 1.67e-13 | 46 |
pre-chordal neural plate | 1.22e-12 | 49 |
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
neurectoderm | 8.34e-12 | 64 |
neural plate | 8.34e-12 | 64 |
presumptive neural plate | 8.34e-12 | 64 |
ecto-epithelium | 2.94e-10 | 73 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
structure with developmental contribution from neural crest | 5.64e-08 | 92 |