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FFCP PHASE1:Mm9::chr2:39046207..39046266,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=320271
|EntrezGene=320271
|HGNC=
|HGNC=
|MCL_coexpression_id=2044
|TSSclassifier=NA
|UniProt=Q8C8N2,B0R0E3,D6RHQ0,Q3TQB4,Q8C4E7
|UniProt=Q8C8N2,B0R0E3,D6RHQ0,Q3TQB4,Q8C4E7
|association_with_transcript=0bp_to_ENSMUST00000038874,ENSMUST00000142872,ENSMUST00000147433,ENSMUST00000157038,ENSMUST00000168231,NM_178778,uc008jof.1,uc008jog.1,uc008joh.1,uc012buy.1,uc012buz.1,uc012bva.1_5end
|association_with_transcript=0bp_to_ENSMUST00000038874,ENSMUST00000142872,ENSMUST00000147433,ENSMUST00000157038,ENSMUST00000168231,NM_178778,uc008jof.1,uc008jog.1,uc008joh.1,uc012buy.1,uc012buz.1,uc012bva.1_5end
|cluster_id=chr2:39046207..39046266,-
|description=CAGE_peak_1_at_Scai_5end
|description=CAGE_peak_1_at_Scai_5end
|id=chr2:39046207..39046266,-
|id=chr2:39046207..39046266,-
|ontology_enrichment_celltype=CL:0000540!6.64e-12!33;CL:0000047!6.64e-12!33;CL:0000031!6.64e-12!33;CL:0000404!6.64e-12!33;CL:0000117!2.07e-10!23;CL:0000337!2.07e-10!23;CL:0000393!2.06e-08!39;CL:0000211!2.06e-08!39
|ontology_enrichment_celltype=CL:0000540!6.64e-12!33;CL:0000047!6.64e-12!33;CL:0000031!6.64e-12!33;CL:0000404!6.64e-12!33;CL:0000117!2.07e-10!23;CL:0000337!2.07e-10!23;CL:0000393!2.06e-08!39;CL:0000211!2.06e-08!39
|ontology_enrichment_celltype_v019_2=CL:0000540,6.64e-12,33;CL:0000047,6.64e-12,33;CL:0000031,6.64e-12,33;CL:0000404,6.64e-12,33;CL:0000117,2.07e-10,23;CL:0000337,2.07e-10,23;CL:0000393,2.06e-08,39;CL:0000211,2.06e-08,39
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!1.12e-18!94;UBERON:0001017!4.25e-17!73;UBERON:0005743!4.25e-17!73;UBERON:0007811!5.10e-16!86;UBERON:0000033!1.21e-15!63;UBERON:0000073!1.82e-15!75;UBERON:0001016!1.82e-15!75;UBERON:0002346!1.88e-15!71;UBERON:0003075!1.88e-15!71;UBERON:0007284!1.88e-15!71;UBERON:0001049!2.40e-15!52;UBERON:0005068!2.40e-15!52;UBERON:0006241!2.40e-15!52;UBERON:0007135!2.40e-15!52;UBERON:0003056!7.28e-15!49;UBERON:0002616!2.63e-14!49;UBERON:0000955!3.26e-14!50;UBERON:0006238!3.26e-14!50;UBERON:0002020!4.59e-14!34;UBERON:0004121!1.18e-12!102;UBERON:0000924!1.18e-12!102;UBERON:0006601!1.18e-12!102;UBERON:0003080!1.73e-12!40;UBERON:0002780!5.38e-12!39;UBERON:0001890!5.38e-12!39;UBERON:0006240!5.38e-12!39;UBERON:0002791!2.33e-11!29;UBERON:0003528!2.33e-11!29;UBERON:0001893!2.33e-11!29;UBERON:0000956!2.32e-08!21;UBERON:0001869!2.32e-08!21;UBERON:0000203!2.32e-08!21;UBERON:0002021!3.53e-08!10;UBERON:0000411!3.53e-08!10;UBERON:0001950!3.53e-08!10;UBERON:0002619!3.37e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.55e-18,64;UBERON:0003075,1.55e-18,64;UBERON:0007284,1.55e-18,64;UBERON:0001017,4.25e-17,73;UBERON:0000073,4.80e-17,54;UBERON:0010371,2.06e-16,73;UBERON:0001016,1.82e-15,75;UBERON:0001049,2.40e-15,52;UBERON:0005068,2.40e-15,52;UBERON:0006241,2.40e-15,52;UBERON:0007135,2.40e-15,52;UBERON:0003056,7.28e-15,49;UBERON:0004121,1.24e-14,95;UBERON:0000924,1.24e-14,95;UBERON:0006601,1.24e-14,95;UBERON:0002020,4.59e-14,34;UBERON:0002616,1.28e-12,46;UBERON:0000955,1.56e-12,47;UBERON:0006238,1.56e-12,47;UBERON:0003080,1.73e-12,40;UBERON:0002780,5.38e-12,39;UBERON:0001890,5.38e-12,39;UBERON:0006240,5.38e-12,39;UBERON:0003528,2.33e-11,29;UBERON:0002791,2.33e-11,29;UBERON:0001893,2.33e-11,29;UBERON:0010314,9.40e-11,92;UBERON:0000956,2.32e-08,21;UBERON:0001869,2.32e-08,21;UBERON:0000203,2.32e-08,21;UBERON:0002021,3.53e-08,10;UBERON:0000411,3.53e-08,10;UBERON:0001950,3.53e-08,10;UBERON:0002619,3.37e-07,17
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.517975385143,13.7568415160092,15.5093998342544,18.8449879053766,8.89970202745701,9.0730481304255,8.69875038321696,16.3470952218415,17.9419855252775,15.0567226315959,26.6398128031345,14.5950600529836,24.4986381961628,26.8748076498777,28.644964665669,32.4015374275447,27.0574215325127,19.0099804130191,25.9129118915106,15.2043911467623,13.4551353885924,14.551132173513,18.2607229580831,22.4509930902829,23.6785035554339,20.6765338044408,24.7367802372962,28.2727252690049,31.1552912072837,31.47889547894,29.9218827501425,32.0242711977499,7.25537227568676,3.7737612073591,2.42227412845584,1.84673078000486,17.7734426509615,9.00875882165674,19.4140721723301,13.076471123823,9.5298699766719,57.0399361043237,57.5406545633971,63.591401991773,74.7561343195041,66.4530044177523,67.2300568676833,68.8522950236442,56.2901504030276,57.549085940994,50.7405105516784,17.1249123513891,18.7541690498485,30.3905818242359,21.1502843849416,14.2536950587028,14.7074806760011,23.5581531469712,18.5431551515005,25.3526175577534,23.2481434822694,19.2644267916582,17.7308760902912,17.3236788819282,18.3111935877926,20.6193333550652,25.2435656380029,21.4386002997983,20.4483773691527,12.7746629249025,24.7294185825788,18.172070376427,17.5701048097744,19.7902037656276,19.6217662453643,18.9159854634815,20.9844227571358,22.8659966090966,17.0995312434598,18.0619471414996,20.2011217796786,23.2524635523381,26.5962102414021,14.3230865109391,15.9584946421545,17.747408210265,16.2376875659665,17.5448706334056,22.346589621023,14.9204899013698,15.8825821766051,13.6802023016049
|phase1_expression=25.3035178425574,9.42233600626275,8.64498554840118,5.74682001482977,6.01074875935617,5.70789524500425,3.50418960893289,19.2393751927949,10.8407316056783,9.36258105287974,8.73211637950075,9.01425396647301,21.7424927012631,18.8828069225034,21.3190247562024,12.5534665781692,16.0899231969474,23.9751245672261,28.7940310572051,22.0682618934976,17.093701320365,12.6099508025124,8.35839325244593,3.51983330145495,5.73523202667925,4.59385571292016,3.4460959692726,4.09395342103189,2.47030445293286,2.77233142735924,3.32595765982957,12.7006134691926,16.6067492647834,15.8481681015439,5.48818077527422,4.3221007793208,7.14592746918292,12.1374172913703,7.813353445238,11.5175223674236,16.4704816648684,10.9287277593351,11.1667381197165,9.9458486200706,12.6721164024393,8.81024410376071,10.1710874765245,3.48840250208714,1.5378032791413,7.58276606389705,5.73944328663986,1.43752564364972,20.8050431511593,16.6833292662609,15.1242209614109,7.71778308107841,13.1805382371828,6.18806510732931,29.3358868246417,34.3844136526821,35.494558596346,6.09920157724438,6.22506357277798,2.2497492932035,0,3.5524005747305,3.59520132622086,6.14749288514487,30.381056406384,20.2508907497536,23.3460707100034,29.7077023779956,29.154647405613,28.5403562170843,18.9774032616108,25.7381260250806,46.2486700197433,40.6045735110897,36.5583549149859,28.2236655742615,21.4081086029639,35.4221091978597,21.4970909231063,32.6402313818374,38.0467636964257,55.6848026545232,52.2504068532708,39.3302830691384,3.93776205332557,4.53429360640713,13.6236309689789,4.30211938490693,2.719885334831,4.85732872474035,7.14754059192436,6.72040330646003,8.70755404816862,8.862376774059,4.41636207824877,5.3000936176551,17.8871143116384,12.8326477414318,20.3844191765317,7.11066703153331,3.46385665617943,4.05375784760158,4.54972000513305,7.87868770061514,42.9836886854305,16.4770774361956,15.4401940821861,5.48037860961854,6.91846491768175,10.5505848386836,17.6383060703557,7.6656620711102,6.42706916109372,13.013942122792,9.73071607144862,15.3678507450039,13.0296495891632,11.1521308221101,5.59175283654366,41.5748731756397,41.4704479490641,4.85368404896324,5.27186547826049,2.99951365496704,3.55796635804581,32.8041500296562,24.2475319493872,44.3559862958411,36.1554585999935,50.8873760087358,26.5968697036237,37.3154905055843,25.5616803264294,19.5318943857846,23.7559392927654,13.6787206326208,23.8120410621748,17.9323641458109,19.8068342785884,31.7987165633359,33.201811585848,36.3842965608973,31.5774811766286,32.337921342377,13.3652155618362,35.55194307155,34.6623714602979,19.2892244536266,39.7607566392605,24.3776516565517,23.4591635505056,27.864797354589,0,2.57347907114715,0.852490498186778,11.8061690345236,11.0227248191115,10.0834754418168,16.0986420197943,15.1508458445501,13.1127045954272,13.2544348507732,16.3646774853768,15.5297905348335,13.9875872426458,15.595909087514,15.159867385075,12.8655988934292,12.7339066868809,11.4075455946316,39.1139304329277,41.5734634012309,6.27795687669216,5.55346189993443,26.6610313169042,26.47498059209,14.9486255133628,14.117846723634,9.11749979763968,11.6037631928661,5.21981967698963,11.3642278759568,13.5721012752146,13.5290400987983,16.182019230887,7.19055526923377,6.48414149624083,7.56736838366595,7.39704813717019,22.1642114462874,28.1769339182701,22.8089487186752,19.3952487167626,23.9163145825986,25.9269802209455,12.6944727262458,13.815888050041,11.4759362447274,3.55743152504579,9.34332592010127,11.4004217165658,8.7696223830093,6.28866376304359,7.47649195232492,6.62027214631691,9.49397253587675,5.99900339067631,4.94210543738547,14.3768206527355,11.5363693777236,8.7370548472077,6.56705082662491,4.12614051100398,2.8946611281802,14.2259956428286,18.380666941737,16.4594626206446,19.1811946925963,23.7037150771387,20.938282180227,16.1869675802489,16.3912264200551,21.1231093102296,15.9454576547118,25.193853447883,12.7813385478276,13.9874835311375,14.1756077409881,10.5553898757491,2.71952841909355,3.93411418415229,10.2096596132751,22.4770825982909,27.5447463491677,7.54100748732707,11.1087207969924,19.5615096038079,21.0836921920185,28.0050417052639,19.8344102300618,19.1606859710859,29.7230357328274,21.8597778904443,16.9508397588561,28.0654322342032,17.3513510867776,22.5684735481147,11.3961986347043,26.7134613339865,23.9206678310176,7.96470830039777,14.5668381692989,12.3952658355548,9.05304382828311,5.02013217897314,16.2940628410282,14.4719844174204,18.9037539328303,12.83390562185,10.7452497698177,10.5418608574999,6.18813259489121,26.2138496430417,24.1281866001956,7.76152102696527,21.6480405381908,24.1182717753492,22.2961022002588,23.6950589667054,7.00269382963578,7.74416636610244,6.99045833850607,9.2621927183084,12.696241476494,17.7610869365496,17.4907482291652,15.1602876883983,13.9519764783302,12.8251568117134,19.655082013114,13.8405413446261,19.6067524565061,16.2971184085346,9.04168593622517,15.8565304156389,16.0144721244566,12.4084253895514,10.9162132812453,12.5761976162026,0.954670618015114,18.8219916180776,21.3485440483191,20.3050040744986,16.517975385143,13.7568415160092,15.5093998342544,18.8449879053766,8.89970202745701,9.0730481304255,8.69875038321696,16.3470952218415,17.9419855252775,15.0567226315959,26.6398128031345,14.5950600529836,24.4986381961628,26.8748076498777,28.644964665669,32.4015374275447,27.0574215325127,19.0099804130191,25.9129118915106,15.2043911467623,13.4551353885924,14.551132173513,18.2607229580831,22.4509930902829,23.6785035554339,20.6765338044408,24.7367802372962,28.2727252690049,31.1552912072837,31.47889547894,29.9218827501425,32.0242711977499,7.25537227568676,3.7737612073591,2.42227412845584,1.84673078000486,17.7734426509615,9.00875882165674,19.4140721723301,13.076471123823,9.5298699766719,57.0399361043237,57.5406545633971,63.591401991773,74.7561343195041,66.4530044177523,67.2300568676833,68.8522950236442,56.2901504030276,57.549085940994,50.7405105516784,17.1249123513891,18.7541690498485,30.3905818242359,21.1502843849416,14.2536950587028,14.7074806760011,23.5581531469712,18.5431551515005,25.3526175577534,23.2481434822694,19.2644267916582,17.7308760902912,17.3236788819282,18.3111935877926,20.6193333550652,25.2435656380029,21.4386002997983,20.4483773691527,12.7746629249025,24.7294185825788,18.172070376427,17.5701048097744,19.7902037656276,19.6217662453643,18.9159854634815,20.9844227571358,22.8659966090966,17.0995312434598,18.0619471414996,20.2011217796786,23.2524635523381,26.5962102414021,14.3230865109391,15.9584946421545,17.747408210265,16.2376875659665,17.5448706334056,22.346589621023,14.9204899013698,15.8825821766051,13.6802023016049
|short_description=p1@Scai
|short_description=p1@Scai
}}
}}

Latest revision as of 16:55, 26 September 2015

Short description:p1@Scai
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scai_5end
Coexpression cluster:MCL_coexpression_mm9:2044
Association with transcript: 0bp_to_ENSMUST00000038874, ENSMUST00000142872, ENSMUST00000147433, ENSMUST00000157038, ENSMUST00000168231, NM_178778, uc008jof.1, uc008jog.1, uc008joh.1, uc012buy.1, uc012buz.1, uc012bva.1_5end
EntrezGene:Scai
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scai

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G725.30
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.42
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I68.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I75.71
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.50
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E919.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E710.84
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.36
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E68.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F19.01
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E421.74
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E818.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A121.32
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A312.55
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A516.09
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.98
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.79
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A622.07
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A317.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.61
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I98.36
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.52
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.74
GP2+ M cell, pool1.CNhs13228.11845-124H94.59
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B92.47
Ileum epithelium, pool2.CNhs13232.10253-104C12.77
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.70
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G616.61
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.49
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.32
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.15
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G812.14
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H17.81
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H311.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G916.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.93
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H411.17
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D89.95
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D912.67
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.81
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C45.74
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.81
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I916.68
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A115.12
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.72
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E113.18
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C56.19
Mouse Granule cells, donor1.CNhs12131.11713-123C329.34
Mouse Granule cells, donor2.CNhs12357.11731-123E334.38
Mouse Granule cells, donor3.CNhs12108.11636-122C735.49
Mouse Meningeal cells, donor1.CNhs12132.11716-123C66.10
Mouse Meningeal cells, donor3.CNhs12109.11639-122D16.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D23.55
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D530.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F520.25
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D923.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F129.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D529.15
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D228.54
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F218.98
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D625.74
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F340.60
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D736.56
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D428.22
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F421.41
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D835.42
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.50
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E532.64
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I638.05
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D655.68
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F652.25
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E139.33
Mouse Schwann, donor1.CNhs12507.11728-123D93.94
Mouse Schwann, donor2.CNhs12573.11746-123F94.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.72
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.15
Mouse hepatocyte, donor8.CNhs13091.11824-124F66.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A78.71
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I78.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E34.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I85.30
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H112.83
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.46
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G24.05
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.88
accessory axillary lymph node, adult.CNhs10475.1063-29H942.98
adrenal gland, adult.CNhs10508.49-24D716.48
adrenal gland, embryo E14.CNhs11038.406-44C515.44
adrenal gland, embryo E16.CNhs11004.1254-43D65.48
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F510.55
adrenal gland, neonate N00.CNhs11191.1311-23C117.64
adrenal gland, neonate N25.CNhs11223.1377-27I37.67
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H113.01
bone (os femoris), adult.CNhs10483.56-12G29.73
bone (os femoris), neonate N02.CNhs11227.1985-43F515.37
bone (os femoris), neonate N16.CNhs11225.1525-43A613.03
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H45.59
cerebellum, adult.CNhs10494.15-8B241.57
cerebellum, neonate N30.CNhs11135.1395-42I241.47
colon, adult.CNhs10468.36-18H74.85
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.27
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D43.56
corpora quadrigemina, adult.CNhs10501.16-22A432.80
corpus striatum, adult.CNhs10487.19-21D824.25
corpus striatum, neonate N00.CNhs11226.630-43F144.36
cortex, adult.CNhs10473.12-14D536.16
cortex, neonate N30.CNhs11107.1392-42F250.89
diencephalon, adult.CNhs10482.20-12F226.60
diencephalon, neonate N30.CNhs11201.1388-42B237.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B125.56
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.53
epididymis, adult.CNhs10490.58-23B223.76
eyeball, adult.CNhs10484.31-12G413.68
eyeball, embryo E12.CNhs11016.345-16C623.81
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C919.81
eyeball, embryo E17.CNhs11023.1261-18D431.80
eyeball, neonate N00.CNhs11207.633-15C633.20
eyeball, neonate N01.CNhs11140.1532-43E736.38
eyeball, neonate N02.CNhs11205.1551-44G831.58
eyeball, neonate N16.CNhs11188.777-19A232.34
forelimb, embryo E11.CNhs10596.335-25E213.37
forelimb, embryo E12.CNhs10600.359-14H235.55
forelimb, embryo E13.CNhs10589.384-1E234.66
forelimb, embryo E14.CNhs10577.413-26A819.29
forelimb, embryo E15.CNhs11007.437-20E739.76
forelimb, embryo E17.CNhs10598.1517-43C424.38
forelimb, embryo E18.CNhs11008.1520-43B523.46
gonad, embryo E13.CNhs11044.1564-45I627.86
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.57
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E911.81
heart, embryo E12.CNhs11015.353-12F511.02
heart, embryo E13.CNhs11013.376-3I910.08
heart, embryo E14.CNhs10597.403-26D416.10
heart, embryo E15.CNhs11017.431-16C815.15
heart, embryo E16.CNhs11021.457-17C613.11
heart, embryo E17.CNhs11025.479-18E513.25
heart, embryo E18.CNhs11030.1283-20G316.36
heart, neonate N00.CNhs11213.639-21E315.53
heart, neonate N03.CNhs11221.1349-25I213.99
heart, neonate N10.CNhs11118.749-24G115.60
heart, neonate N16.CNhs11209.782-15G115.16
heart, neonate N20.CNhs11127.821-26I612.87
heart, neonate N25.CNhs11196.1351-25D312.73
heart, neonate N30.CNhs11202.1390-42D211.41
hippocampus, adult.CNhs10478.13-16E839.11
hippocampus, neonate N00.CNhs11228.627-43G141.57
intestinal mucosa, adult.CNhs10506.860-29I36.28
intestine, adult.CNhs10496.178-9A35.55
intestine, embryo E12.CNhs11019.1251-16I526.66
intestine, embryo E13.CNhs11010.381-16D526.47
intestine, embryo E15.CNhs10602.976-16D814.95
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D39.12
intestine, embryo E18.CNhs10526.1289-20F711.60
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B813.57
intestine, neonate N07.CNhs11095.720-20F213.53
intestine, neonate N10.CNhs11098.755-23A516.18
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.48
intestine, neonate N30.CNhs11131.1384-42G17.57
kidney, embryo E14.CNhs10606.411-4I97.40
kidney, embryo E15.CNhs10997.434-16F822.16
kidney, embryo E16.CNhs10584.464-22A528.18
kidney, embryo E17.CNhs11028.483-18I222.81
kidney, embryo E18.CNhs11001.1288-20C719.40
kidney, neonate N00.CNhs11214.646-21G723.92
kidney, neonate N10.CNhs11206.758-6D525.93
kidney, neonate N20.CNhs11113.832-19I112.69
kidney, neonate N25.CNhs11122.1353-25F313.82
kidney, neonate N30.CNhs11203.1385-42H111.48
liver, adult pregnant day01.CNhs10466.508-5B23.56
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H611.40
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D76.29
liver, embryo E16.CNhs10523.462-17F57.48
liver, embryo E17.CNhs10510.481-18A36.62
liver, embryo E18.CNhs10579.499-43G49.49
liver, neonate N00.CNhs11117.641-24F46.00
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H211.54
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A36.57
liver, neonate N25.CNhs11198.1368-26H14.13
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B114.23
lung, embryo E12.CNhs10522.354-16G218.38
lung, embryo E14.CNhs10604.404-26F816.46
lung, embryo E15.CNhs11020.432-17C519.18
lung, embryo E16.CNhs10998.458-17B623.70
lung, embryo E17.CNhs10605.480-44A620.94
lung, embryo E18.CNhs10583.1287-20I616.19
lung, neonate N00.CNhs11224.640-42C616.39
lung, neonate N06.CNhs11212.683-20E521.12
lung, neonate N07.CNhs11111.715-19A315.95
lung, neonate N10.CNhs11219.750-23E625.19
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C713.99
lung, neonate N30.CNhs11133.1394-42H214.18
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A110.56
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A12.72
mammary gland, adult lactating day02.CNhs10480.595-22B63.93
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C222.48
medulla oblongata, neonate N30.CNhs11200.1396-42A327.54
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.54
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C211.11
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E119.56
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E221.08
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E328.01
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D719.83
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D819.16
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D929.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D421.86
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D516.95
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D628.07
olfactory brain, adult.CNhs10489.18-22I917.35
ovary, adult.CNhs10507.91-2I722.57
ovary, embryo E18.CNhs11040.505-44H711.40
ovary, neonate N00.CNhs11217.1299-22I426.71
oviduct, adult pregnant day01.CNhs10500.988-6G623.92
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F414.57
pancreas, embryo E15.CNhs11042.1556-45F212.40
pancreas, embryo E16.CNhs11003.460-26E59.05
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I716.29
pancreas, neonate N00.CNhs11105.645-26G914.47
pancreas, neonate N01.CNhs11138.1531-43D718.90
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B610.75
pancreas, neonate N25.CNhs11094.1555-45E210.54
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G826.21
pituitary gland, embryo E12.CNhs11018.346-16E624.13
pituitary gland, embryo E13.CNhs11009.370-44C77.76
pituitary gland, embryo E14.CNhs11037.398-44A521.65
pituitary gland, embryo E15.CNhs10592.427-16B924.12
pituitary gland, embryo E16.CNhs11036.449-43F622.30
pituitary gland, embryo E17.CNhs11039.1265-44F523.70
pituitary gland, neonate N00.CNhs11190.1308-22E97.00
placenta, adult pregnant day10.CNhs10472.539-13I77.74
placenta, adult pregnant day17.CNhs10464.577-18G36.99
prostate, adult.CNhs10470.859-1F89.26
skin, adult.CNhs10492.30-1C312.70
skin, neonate N00.CNhs11124.650-25G417.76
skin, neonate N03.CNhs11215.662-22H317.49
skin, neonate N06.CNhs11097.693-20I515.16
skin, neonate N10.CNhs11108.762-6C413.95
small intestine, neonate N16.CNhs11114.790-21I112.83
spinal cord, adult.CNhs10505.24-13C919.66
spleen, adult.CNhs10465.25-2G213.84
spleen, embryo E16.CNhs11035.461-43C119.61
spleen, embryo E18.CNhs11011.1271-21F216.30
spleen, neonate N10.CNhs11116.752-24D19.04
spleen, neonate N20.CNhs11112.824-19H115.86
spleen, neonate N25.CNhs11099.1354-25G316.01
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C612.41
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C910.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D312.58
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E318.82
stomach, embryo E15.CNhs10603.1252-16G821.35
stomach, embryo E16.CNhs11022.459-17D420.31
stomach, embryo E17.CNhs11006.1035-18D516.52
stomach, embryo E18.CNhs10999.1286-20C613.76
stomach, neonate N03.CNhs11193.1340-24B815.51
stomach, neonate N07.CNhs11210.718-18A918.84
stomach, neonate N25.CNhs11104.1355-25E48.90
stomach, neonate N30.CNhs11134.1386-42I19.07
submandibular gland, adult.CNhs10469.59-29C18.70
testis, adult.CNhs10504.57-7G516.35
testis, embryo E13.CNhs11031.389-23F517.94
testis, embryo E15.CNhs11034.443-27C515.06
testis, embryo E16.CNhs11033.470-26G526.64
testis, embryo E17.CNhs11029.486-18I514.60
testis, embryo E18.CNhs11027.503-18G524.50
testis, neonate N00.CNhs11189.1300-22B726.87
testis, neonate N07.CNhs11222.726-26I428.64
testis, neonate N10.CNhs11204.763-44D932.40
testis, neonate N20.CNhs11110.839-18H327.06
testis, neonate N30.CNhs11130.1391-42E219.01
thymus, adult.CNhs10471.38-12B525.91
thymus, embryo E14.CNhs11041.402-44I415.20
thymus, embryo E15.CNhs11005.430-45I213.46
thymus, embryo E16.CNhs11002.456-26C514.55
thymus, embryo E17.CNhs10581.478-18C118.26
thymus, embryo E18.CNhs10595.1273-19G422.45
thymus, neonate N02.CNhs11181.1541-43F823.68
thymus, neonate N03.CNhs11137.2104-43C720.68
thymus, neonate N06.CNhs11197.681-26C424.74
thymus, neonate N07.CNhs11211.713-19D328.27
thymus, neonate N10.CNhs11194.748-24E431.16
thymus, neonate N20.CNhs11186.820-7A231.48
thymus, neonate N25.CNhs11125.1362-25G729.92
thymus, neonate N30.CNhs11132.1393-42G232.02
tongue, adult.CNhs10499.32-1B47.26
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.77
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E417.77
uterus, adult pregnant day19.CNhs10497.590-15F59.01
uterus, adult.CNhs10509.92-27E519.41
vagina, adult.CNhs10502.89-27D513.08
vesicular gland, adult.CNhs10491.51-27F89.53
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A257.54
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A363.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D774.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A466.45
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A567.23
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A668.85
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A756.29
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A857.55
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A950.74
whole body, embryo E11.CNhs11014.324-5I817.12
whole body, embryo E12.CNhs10587.857-27C918.75
whole body, embryo E13.CNhs10512.372-23H230.39
whole body, embryo E14.5.CNhs10578.420-27D221.15
whole body, embryo E14.CNhs10519.395-14B114.25
whole body, embryo E16.CNhs10514.453-14F214.71
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G518.54
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G525.35
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G519.26
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G517.73
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G517.32
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G518.31
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.62
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G525.24
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G521.44
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G520.45
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G512.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G524.73
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G518.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G517.57
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G519.79
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G519.62
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G518.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G520.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G522.87
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.06
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G520.20
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G526.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.32
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.96
whole body, embryo E17.5.CNhs10513.490-9F917.75
whole body, embryo E17.CNhs10517.475-3I516.24
whole body, embryo E18.CNhs10516.493-3B317.54
whole body, neonate N00.CNhs10525.657-19C222.35
whole body, neonate N01.CNhs10576.659-23C614.92
whole body, neonate N06.CNhs10515.692-21D115.88
whole body, neonate N10.CNhs10518.761-6B413.68





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron6.64e-1233
neuronal stem cell6.64e-1233
neuroblast6.64e-1233
electrically signaling cell6.64e-1233
CNS neuron (sensu Vertebrata)2.07e-1023
neuroblast (sensu Vertebrata)2.07e-1023
electrically responsive cell2.06e-0839
electrically active cell2.06e-0839

Uber anatomy
Ontology termp-valuen
neurectoderm1.55e-1864
neural plate1.55e-1864
presumptive neural plate1.55e-1864
central nervous system4.25e-1773
regional part of nervous system4.80e-1754
ecto-epithelium2.06e-1673
nervous system1.82e-1575
neural tube2.40e-1552
neural rod2.40e-1552
future spinal cord2.40e-1552
neural keel2.40e-1552
pre-chordal neural plate7.28e-1549
ectoderm-derived structure1.24e-1495
ectoderm1.24e-1495
presumptive ectoderm1.24e-1495
gray matter4.59e-1434
regional part of brain1.28e-1246
brain1.56e-1247
future brain1.56e-1247
anterior neural tube1.73e-1240
regional part of forebrain5.38e-1239
forebrain5.38e-1239
future forebrain5.38e-1239
brain grey matter2.33e-1129
regional part of telencephalon2.33e-1129
telencephalon2.33e-1129
structure with developmental contribution from neural crest9.40e-1192
cerebral cortex2.32e-0821
cerebral hemisphere2.32e-0821
pallium2.32e-0821
occipital lobe3.53e-0810
visual cortex3.53e-0810
neocortex3.53e-0810
regional part of cerebral cortex3.37e-0717
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