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FFCP PHASE1:Mm9::chr6:58781450..58781498,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=73998
|EntrezGene=73998
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=D3Z2S3,D3Z3U0
|UniProt=D3Z2S3,D3Z3U0
|association_with_transcript=0bp_to_ENSMUST00000122981,ENSMUST00000141600_5end
|association_with_transcript=0bp_to_ENSMUST00000122981,ENSMUST00000141600_5end
|cluster_id=chr6:58781450..58781498,+
|description=CAGE_peak_1_at_Herc3_5end
|description=CAGE_peak_1_at_Herc3_5end
|id=chr6:58781450..58781498,+
|id=chr6:58781450..58781498,+
|ontology_enrichment_celltype=CL:0000117!8.41e-07!23;CL:0000337!8.41e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,7.72e-07,23;CL:0000337,7.72e-07,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!3.55e-13!52;UBERON:0005068!3.55e-13!52;UBERON:0006241!3.55e-13!52;UBERON:0007135!3.55e-13!52;UBERON:0000955!3.96e-12!50;UBERON:0006238!3.96e-12!50;UBERON:0002616!9.45e-12!49;UBERON:0002020!1.09e-11!34;UBERON:0000033!7.37e-10!63;UBERON:0001017!1.84e-09!73;UBERON:0005743!1.84e-09!73;UBERON:0003080!2.09e-09!40;UBERON:0002791!3.45e-09!29;UBERON:0003528!3.45e-09!29;UBERON:0001893!3.45e-09!29;UBERON:0000073!3.76e-09!75;UBERON:0001016!3.76e-09!75;UBERON:0002780!7.46e-09!39;UBERON:0001890!7.46e-09!39;UBERON:0006240!7.46e-09!39;UBERON:0002346!1.60e-08!71;UBERON:0003075!1.60e-08!71;UBERON:0007284!1.60e-08!71;UBERON:0003056!2.99e-08!49;UBERON:0002021!2.24e-07!10;UBERON:0000411!2.24e-07!10;UBERON:0001950!2.24e-07!10;UBERON:0007811!2.51e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.80e-14,54;UBERON:0001049,3.38e-13,52;UBERON:0005068,3.38e-13,52;UBERON:0006241,3.38e-13,52;UBERON:0007135,3.38e-13,52;UBERON:0002020,9.80e-12,34;UBERON:0010314,9.95e-11,92;UBERON:0000955,1.29e-10,47;UBERON:0006238,1.29e-10,47;UBERON:0002616,2.98e-10,46;UBERON:0002346,3.17e-10,64;UBERON:0003075,3.17e-10,64;UBERON:0007284,3.17e-10,64;UBERON:0001017,1.87e-09,73;UBERON:0003080,1.92e-09,40;UBERON:0003528,3.14e-09,29;UBERON:0002791,3.14e-09,29;UBERON:0001893,3.14e-09,29;UBERON:0001016,3.83e-09,75;UBERON:0002780,6.87e-09,39;UBERON:0001890,6.87e-09,39;UBERON:0006240,6.87e-09,39;UBERON:0010371,1.07e-08,73;UBERON:0003056,2.79e-08,49;UBERON:0002021,2.22e-07,10;UBERON:0000411,2.22e-07,10;UBERON:0001950,2.22e-07,10;UBERON:0004121,3.33e-07,95;UBERON:0000924,3.33e-07,95;UBERON:0006601,3.33e-07,95
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958,0.827292452285488,3.50012139019286,2.58319646955462,2.36538575687089,3.87278887530988,3.1249052362548,5.34782656571125,2.89900944991207,2.01621004380506,6.95224465381992,2.22997736819181,2.77319584345034,2.33857481360031,3.75956060901711,2.98022032171897,4.92801343031872,3.83992770653901,4.54349024766664,6.85861259894999,4.53717833115782,6.43222012882366,7.98558285614734,8.99952146798081,1.81384306892169,4.21773311410723,4.93426211352116,7.38692312001945,3.67060228661162,2.43987218086537,2.01466786693992,1.2862102744744,3.51100472824754,9.03602948187307,17.0320337507655,12.6037012956667,18.5601436931183,13.7016503954128,20.3956352295219,22.2757425076496,17.5625269257446,16.3131267234314,19.6748918465692,1.24544817101012,0.798049746802062,2.90247129782028,2.43106717068294,3.14419743941973,3.8607136774503,5.11167473943715,6.59312183164461,4.81378814387723,5.05394423527595,4.05566879824384,4.90428487603798,4.775716880964,6.14641463086745,6.03072424033939,3.33405583898152,6.83717523074647,7.33055037762079,4.12085900803307,5.00476328456951,6.17164654293748,4.43689515398344,5.24559617884106,4.21504608233753,5.64656282491984,6.09225176820071,6.76833499629258,4.73525480588117,6.3827933507555,4.48913817326191,5.69448086996036,6.99381824866501,6.13846564754534,6.66228417099654,4.62975866354739,4.74640098082097,3.50897412668113,4.72716318906256,5.92993829413414,4.19123696327079,3.47801753430632
|phase1_expression=4.32401887182944,3.14077866875425,3.63999391511629,6.65421264875026,9.5170188689806,4.02910252588535,3.27057696833736,11.4919757863003,3.23814060948833,2.10658073689794,1.19852577757853,1.51567102091139,17.462474452983,14.8614684112296,2.33176833270964,3.44207954562704,1.39912375625629,11.0411757875383,12.2031845909108,13.580468857537,4.59233766815777,0,0,3.35984087866154,5.96464130774642,2.29692785646008,3.4460959692726,2.37018355954478,4.18051522804023,6.5527833737582,2.88249663851896,0,0,0,3.75507105676657,3.65716219788683,4.49172583777212,6.27797446105362,2.3440060335714,5.75876118371178,4.1176204162171,7.5135003345429,4.85510353031154,0.377690453926732,0,0.183546752161682,0.782391344348039,2.61630187656536,5.05278220289285,2.13872888981712,4.4795654920116,2.87505128729943,6.71130424230945,7.25362142011344,10.0828139742739,1.28629718017973,0.85960031981627,1.54701627683233,8.49729135610311,8.46385566835253,3.80298842103708,1.35537812827653,0.889294796111139,2.2497492932035,0.988866362566974,0.7104801149461,2.39680088414724,1.15265491596466,5.70292867696627,7.02030879324791,3.78584930432488,13.139945282575,12.3686382932904,3.30725157880376,4.88811902193005,0,13.2139057199266,14.5563565417114,14.4390141260869,6.59431438650969,7.77644970620482,8.85552729946492,13.1216009530649,16.3201156909187,13.9046405476897,12.9636577608414,12.6710795911202,14.1663578827228,3.40767869999328,3.55186332501892,5.50742528533188,3.44169550792555,0,3.2382191498269,2.59910566979068,0.896053774194671,4.49422144421606,0.852151612890289,1.29893002301434,0.35333957451034,4.64783285263046,0,0,0,1.94841936910093,2.78695852022608,3.53867111510348,3.76806803072898,2.84831672011889,4.00793775475027,2.94925055502431,1.52232739156071,2.53677046981664,2.71300752994721,4.11560474974967,4.14699751387929,10.6293836125781,3.7595832799177,5.30766331169925,7.27950824763341,3.75430581382669,0.969750506270444,0,22.8369021669007,19.4785437336513,4.34276993854605,2.75574786363617,1.79970819298022,1.77898317902291,18.8736205650077,16.9275223042892,7.91622418311046,18.7730265807659,18.6672283851141,17.2464076984435,12.9793010454206,3.1570202793598,3.73220911830279,6.31806896084187,8.83855794723191,2.60240885925407,2.98872735763515,1.98068342785884,2.56198190320716,3.6739709541717,4.22775276940004,4.96619140166563,19.4027528054262,1.5089759505299,1.70195472151037,1.23165786914764,1.53437012699302,3.33656699070717,2.089512999133,1.85203922767149,2.7864797354589,0,1.02939162845886,0.852490498186778,5.79952163099405,4.92504725960302,5.40186184383045,7.57583153872673,8.06733350164356,7.25055430570678,7.20855228726264,10.4626626545851,8.87416601990488,10.6963902443762,9.02921052435024,9.24184428822755,7.45619935869195,6.80605357402257,6.71032093801859,19.3466752678997,5.65975368086064,4.95628174475697,2.90895623329899,2.34617075588757,4.87697010906921,3.22168653305233,6.25218926332362,6.89371935919098,7.79925067061493,7.11793592316767,9.0584425098206,9.80207314321051,9.54991065797524,9.94316844307513,7.19055526923377,4.53889904736858,4.18196673834171,1.13800740571849,2.05647322697512,7.88954149711563,3.05476991767971,3.29719228184964,3.92760591385784,7.01925562079256,4.87113488332687,5.65195420228949,6.16985819609003,3.85388415213294,2.50267658574141,1.37591296579242,2.24862112384854,1.82574109249653,3.61765739628625,2.80088436959562,3.74004978686054,2.2698931748505,1.92192989231657,7.18841032636773,3.72140947668503,3.43241440426017,2.52578877947112,3.04975602987251,3.85954817090694,4.0645701836653,2.08440552947533,1.95557971730431,3.39490171550376,2.34690248288502,3.1826188913945,2.61848004974615,6.04914308359176,3.62560831444239,2.87904096543407,2.87018583583477,3.27726629431476,3.9717545829156,3.61622646453779,3.01582567878545,4.35124547054968,3.44234991113325,6.62248191131358,14.4495530989013,15.1203075703942,0.327869890753351,5.80683132570058,2.2085575359138,1.17131623288992,2.58508077279359,2.15071918157297,2.67358408898873,0.849229592366497,2.83367491172426,1.46127928955656,3.95287777946523,8.35435422696698,3.40656204499845,1.78065603667255,4.23506094319298,3.13443233647817,5.30980553359851,2.91336763385978,2.72091201268276,1.13163047853539,3.2483208216885,3.07435147943927,3.35956781118687,5.08947221268508,3.92147116223193,1.58018378967908,4.21674434299995,1.03135543248187,9.53230896110606,2.52085531643834,2.19909762430683,3.00071849044229,5.85222771019503,5.17269571046005,6.91105886528908,2.74018454203139,3.98941903708308,6.14313005505079,2.42581237860458,4.122156323537,2.26050197374268,3.19658502119226,2.626191568069,1.31312719796049,6.70405924248657,13.9068976507882,4.78438466233988,2.88941615148511,2.03713980106683,2.0720530270516,3.14396723758358,3.66045077130436,4.24946074984638,2.93898049879682,1.93479963326193,3.81868247206045,2.53068794864908,2.64315307264903,3.34816556547584,2.50905955217362,3.71216358368502,4.45052343069908,6.11635572367486,4.71160695571253,5.70305882483889,2.4853572523477,0.56369293868419,2.99033092087958,0.827292452285488,3.50012139019286,2.58319646955462,2.36538575687089,3.87278887530988,3.1249052362548,5.34782656571125,2.89900944991207,2.01621004380506,6.95224465381992,2.22997736819181,2.77319584345034,2.33857481360031,3.75956060901711,2.98022032171897,4.92801343031872,3.83992770653901,4.54349024766664,6.85861259894999,4.53717833115782,6.43222012882366,7.98558285614734,8.99952146798081,1.81384306892169,4.21773311410723,4.93426211352116,7.38692312001945,3.67060228661162,2.43987218086537,2.01466786693992,1.2862102744744,3.51100472824754,9.03602948187307,17.0320337507655,12.6037012956667,18.5601436931183,13.7016503954128,20.3956352295219,22.2757425076496,17.5625269257446,16.3131267234314,19.6748918465692,1.24544817101012,0.798049746802062,2.90247129782028,2.43106717068294,3.14419743941973,3.8607136774503,5.11167473943715,6.59312183164461,4.81378814387723,5.05394423527595,4.05566879824384,4.90428487603798,4.775716880964,6.14641463086745,6.03072424033939,3.33405583898152,6.83717523074647,7.33055037762079,4.12085900803307,5.00476328456951,6.17164654293748,4.43689515398344,5.24559617884106,4.21504608233753,5.64656282491984,6.09225176820071,6.76833499629258,4.73525480588117,6.3827933507555,4.48913817326191,5.69448086996036,6.99381824866501,6.13846564754534,6.66228417099654,4.62975866354739,4.74640098082097,3.50897412668113,4.72716318906256,5.92993829413414,4.19123696327079,3.47801753430632
|short_description=p1@Herc3
|short_description=p1@Herc3
}}
}}

Latest revision as of 14:50, 1 October 2015

Short description:p1@Herc3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Herc3_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 0bp_to_ENSMUST00000122981, ENSMUST00000141600_5end
EntrezGene:Herc3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Herc3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G74.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.64
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I49.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I74.03
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I83.27
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E911.49
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.24
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F22.11
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.20
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.52
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E417.46
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E814.86
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.44
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A211.04
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A412.20
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A613.58
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.59
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D13.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D25.96
GP2+ M cell, pool1.CNhs13228.11845-124H92.30
GP2+ M cell, pool2.CNhs13231.11846-124I13.45
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B94.18
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C82.88
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F53.76
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F63.66
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F74.49
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G86.28
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.86
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.48
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.71
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.25
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A110.08
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.55
Mouse Granule cells, donor1.CNhs12131.11713-123C38.50
Mouse Granule cells, donor2.CNhs12357.11731-123E38.46
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C82.40
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.70
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.02
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.79
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F113.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D512.37
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F314.56
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D714.44
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.59
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.78
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D88.86
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I613.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D612.96
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.67
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E114.17
Mouse Schwann, donor1.CNhs12507.11728-123D93.41
Mouse Schwann, donor2.CNhs12573.11746-123F93.55
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.51
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F73.44
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C83.24
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A74.49
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.65
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.95
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H92.85
adrenal gland, adult.CNhs10508.49-24D74.01
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I12.54
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C14.12
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A810.63
aorta, adult.CNhs10498.46-23H13.76
bone (os femoris), adult.CNhs10483.56-12G25.31
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B222.84
cerebellum, neonate N30.CNhs11135.1395-42I219.48
colon, adult.CNhs10468.36-18H74.34
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C72.76
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.78
corpora quadrigemina, adult.CNhs10501.16-22A418.87
corpus striatum, adult.CNhs10487.19-21D816.93
corpus striatum, neonate N00.CNhs11226.630-43F17.92
cortex, adult.CNhs10473.12-14D518.77
cortex, neonate N30.CNhs11107.1392-42F218.67
diencephalon, adult.CNhs10482.20-12F217.25
diencephalon, neonate N30.CNhs11201.1388-42B212.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A23.73
epididymis, adult.CNhs10490.58-23B26.32
eyeball, adult.CNhs10484.31-12G48.84
eyeball, embryo E12.CNhs11016.345-16C62.60
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C91.98
eyeball, embryo E17.CNhs11023.1261-18D42.56
eyeball, neonate N00.CNhs11207.633-15C63.67
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G84.97
eyeball, neonate N16.CNhs11188.777-19A219.40
forelimb, embryo E11.CNhs10596.335-25E21.51
forelimb, embryo E12.CNhs10600.359-14H21.70
forelimb, embryo E13.CNhs10589.384-1E21.23
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C42.09
forelimb, embryo E18.CNhs11008.1520-43B51.85
gonad, embryo E13.CNhs11044.1564-45I62.79
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E95.80
heart, embryo E12.CNhs11015.353-12F54.93
heart, embryo E13.CNhs11013.376-3I95.40
heart, embryo E14.CNhs10597.403-26D47.58
heart, embryo E15.CNhs11017.431-16C88.07
heart, embryo E16.CNhs11021.457-17C67.25
heart, embryo E17.CNhs11025.479-18E57.21
heart, embryo E18.CNhs11030.1283-20G310.46
heart, neonate N00.CNhs11213.639-21E38.87
heart, neonate N03.CNhs11221.1349-25I210.70
heart, neonate N10.CNhs11118.749-24G19.03
heart, neonate N16.CNhs11209.782-15G19.24
heart, neonate N20.CNhs11127.821-26I67.46
heart, neonate N25.CNhs11196.1351-25D36.81
heart, neonate N30.CNhs11202.1390-42D26.71
hippocampus, adult.CNhs10478.13-16E819.35
hippocampus, neonate N00.CNhs11228.627-43G15.66
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I52.35
intestine, embryo E13.CNhs11010.381-16D54.88
intestine, embryo E15.CNhs10602.976-16D83.22
intestine, embryo E16.CNhs10585.463-22H46.25
intestine, embryo E17.CNhs10582.482-18D36.89
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E99.06
intestine, neonate N06.CNhs11102.688-20B89.80
intestine, neonate N07.CNhs11095.720-20F29.55
intestine, neonate N10.CNhs11098.755-23A59.94
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E34.54
intestine, neonate N30.CNhs11131.1384-42G14.18
kidney, embryo E14.CNhs10606.411-4I91.14
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A57.89
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C73.30
kidney, neonate N00.CNhs11214.646-21G73.93
kidney, neonate N10.CNhs11206.758-6D57.02
kidney, neonate N20.CNhs11113.832-19I14.87
kidney, neonate N25.CNhs11122.1353-25F35.65
kidney, neonate N30.CNhs11203.1385-42H16.17
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H61.38
liver, embryo E14.CNhs10594.409-16E12.25
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F53.62
liver, embryo E17.CNhs10510.481-18A32.80
liver, embryo E18.CNhs10579.499-43G43.74
liver, neonate N00.CNhs11117.641-24F42.27
liver, neonate N03.CNhs11123.1345-25G21.92
liver, neonate N06.CNhs11101.684-20A87.19
liver, neonate N07.CNhs11103.716-20H23.72
liver, neonate N10.CNhs11115.751-24B93.43
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H13.05
liver, neonate N30.CNhs11106.1382-42D13.86
lung, adult.CNhs10474.28-22B14.06
lung, embryo E12.CNhs10522.354-16G22.08
lung, embryo E14.CNhs10604.404-26F81.96
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B62.35
lung, embryo E17.CNhs10605.480-44A63.18
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E53.63
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E62.87
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C73.97
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.35
mammary gland, adult lactating day02.CNhs10480.595-22B63.44
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C214.45
medulla oblongata, neonate N30.CNhs11200.1396-42A315.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C25.81
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.59
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.83
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.46
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.95
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I73.41
ovary, embryo E18.CNhs11040.505-44H71.78
ovary, neonate N00.CNhs11217.1299-22I44.24
oviduct, adult pregnant day01.CNhs10500.988-6G63.13
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I73.07
pancreas, neonate N00.CNhs11105.645-26G93.36
pancreas, neonate N01.CNhs11138.1531-43D75.09
pancreas, neonate N02.CNhs11139.1539-43D83.92
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G89.53
pituitary gland, embryo E12.CNhs11018.346-16E62.52
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F65.17
pituitary gland, embryo E17.CNhs11039.1265-44F56.91
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I73.99
placenta, adult pregnant day17.CNhs10464.577-18G36.14
prostate, adult.CNhs10470.859-1F82.43
skin, adult.CNhs10492.30-1C34.12
skin, neonate N00.CNhs11124.650-25G42.26
skin, neonate N03.CNhs11215.662-22H33.20
skin, neonate N06.CNhs11097.693-20I52.63
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I16.70
spinal cord, adult.CNhs10505.24-13C913.91
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C12.89
spleen, embryo E18.CNhs11011.1271-21F22.04
spleen, neonate N10.CNhs11116.752-24D12.07
spleen, neonate N20.CNhs11112.824-19H13.14
spleen, neonate N25.CNhs11099.1354-25G33.66
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C64.25
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C92.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.93
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E32.53
stomach, embryo E15.CNhs10603.1252-16G82.64
stomach, embryo E16.CNhs11022.459-17D43.35
stomach, embryo E17.CNhs11006.1035-18D52.51
stomach, embryo E18.CNhs10999.1286-20C63.71
stomach, neonate N03.CNhs11193.1340-24B84.45
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E44.71
stomach, neonate N30.CNhs11134.1386-42I15.70
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C50.83
testis, embryo E16.CNhs11033.470-26G53.50
testis, embryo E17.CNhs11029.486-18I52.58
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.87
testis, neonate N07.CNhs11222.726-26I43.12
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H32.90
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B56.95
thymus, embryo E14.CNhs11041.402-44I42.23
thymus, embryo E15.CNhs11005.430-45I22.77
thymus, embryo E16.CNhs11002.456-26C52.34
thymus, embryo E17.CNhs10581.478-18C13.76
thymus, embryo E18.CNhs10595.1273-19G42.98
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C73.84
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D36.86
thymus, neonate N10.CNhs11194.748-24E44.54
thymus, neonate N20.CNhs11186.820-7A26.43
thymus, neonate N25.CNhs11125.1362-25G77.99
thymus, neonate N30.CNhs11132.1393-42G29.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F74.93
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.39
urinary bladder, adult.CNhs10481.879-12E43.67
uterus, adult pregnant day19.CNhs10497.590-15F52.44
uterus, adult.CNhs10509.92-27E52.01
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.04
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A217.03
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.60
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D718.56
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.70
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A520.40
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A622.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A717.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A816.31
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A919.67
whole body, embryo E11.CNhs11014.324-5I81.25
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.14
whole body, embryo E16.CNhs10514.453-14F23.86
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.81
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.90
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G56.15
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G56.77
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G56.38
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.69
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.14
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.66
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I54.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C24.73
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D14.19
whole body, neonate N10.CNhs10518.761-6B43.48





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)7.72e-0723
neuroblast (sensu Vertebrata)7.72e-0723

Uber anatomy
Ontology termp-valuen
regional part of nervous system2.80e-1454
neural tube3.38e-1352
neural rod3.38e-1352
future spinal cord3.38e-1352
neural keel3.38e-1352
gray matter9.80e-1234
structure with developmental contribution from neural crest9.95e-1192
brain1.29e-1047
future brain1.29e-1047
regional part of brain2.98e-1046
neurectoderm3.17e-1064
neural plate3.17e-1064
presumptive neural plate3.17e-1064
central nervous system1.87e-0973
anterior neural tube1.92e-0940
brain grey matter3.14e-0929
regional part of telencephalon3.14e-0929
telencephalon3.14e-0929
nervous system3.83e-0975
regional part of forebrain6.87e-0939
forebrain6.87e-0939
future forebrain6.87e-0939
ecto-epithelium1.07e-0873
pre-chordal neural plate2.79e-0849
occipital lobe2.22e-0710
visual cortex2.22e-0710
neocortex2.22e-0710
ectoderm-derived structure3.33e-0795
ectoderm3.33e-0795
presumptive ectoderm3.33e-0795
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