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FFCP PHASE1:Mm9::chr7:103358617..103358693,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=23966
|EntrezGene=23966
|HGNC=
|HGNC=
|MCL_coexpression_id=1474
|TSSclassifier=NA
|UniProt=D3YVP2
|UniProt=D3YVP2
|association_with_transcript=0bp_to_ENSMUST00000129445,ENSMUST00000138760_5end
|association_with_transcript=0bp_to_ENSMUST00000129445,ENSMUST00000138760_5end
|cluster_id=chr7:103358617..103358693,+
|description=CAGE_peak_1_at_Odz4_5end
|description=CAGE_peak_1_at_Odz4_5end
|id=chr7:103358617..103358693,+
|id=chr7:103358617..103358693,+
|ontology_enrichment_celltype=CL:0000117!7.16e-11!23;CL:0000337!7.16e-11!23
|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-11,23;CL:0000337,3.42e-11,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!5.91e-18!63;UBERON:0003056!9.91e-18!49;UBERON:0001049!5.29e-17!52;UBERON:0005068!5.29e-17!52;UBERON:0006241!5.29e-17!52;UBERON:0007135!5.29e-17!52;UBERON:0004121!1.22e-16!102;UBERON:0000924!1.22e-16!102;UBERON:0006601!1.22e-16!102;UBERON:0002020!6.98e-16!34;UBERON:0003080!9.08e-16!40;UBERON:0002346!1.15e-15!71;UBERON:0003075!1.15e-15!71;UBERON:0007284!1.15e-15!71;UBERON:0000955!2.21e-15!50;UBERON:0006238!2.21e-15!50;UBERON:0002780!2.34e-15!39;UBERON:0001890!2.34e-15!39;UBERON:0006240!2.34e-15!39;UBERON:0002616!1.03e-14!49;UBERON:0001017!1.30e-13!73;UBERON:0005743!1.30e-13!73;UBERON:0002791!5.40e-13!29;UBERON:0003528!5.40e-13!29;UBERON:0001893!5.40e-13!29;UBERON:0000073!9.39e-13!75;UBERON:0001016!9.39e-13!75;UBERON:0000153!4.98e-12!94;UBERON:0007811!1.37e-10!86;UBERON:0000956!1.67e-10!21;UBERON:0001869!1.67e-10!21;UBERON:0000203!1.67e-10!21;UBERON:0000468!2.55e-10!333;UBERON:0002619!7.51e-08!17;UBERON:0000922!9.12e-08!328;UBERON:0002021!7.97e-07!10;UBERON:0000411!7.97e-07!10;UBERON:0001950!7.97e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0010371,2.21e-20,73;UBERON:0003056,8.72e-18,49;UBERON:0000073,1.31e-17,54;UBERON:0001049,5.09e-17,52;UBERON:0005068,5.09e-17,52;UBERON:0006241,5.09e-17,52;UBERON:0007135,5.09e-17,52;UBERON:0002346,7.70e-17,64;UBERON:0003075,7.70e-17,64;UBERON:0007284,7.70e-17,64;UBERON:0004121,2.20e-16,95;UBERON:0000924,2.20e-16,95;UBERON:0006601,2.20e-16,95;UBERON:0002020,8.02e-16,34;UBERON:0003080,9.59e-16,40;UBERON:0002780,2.55e-15,39;UBERON:0001890,2.55e-15,39;UBERON:0006240,2.55e-15,39;UBERON:0000955,1.70e-14,47;UBERON:0006238,1.70e-14,47;UBERON:0002616,8.05e-14,46;UBERON:0003528,7.44e-13,29;UBERON:0002791,7.44e-13,29;UBERON:0001893,7.44e-13,29;UBERON:0001017,9.64e-13,73;UBERON:0001016,1.27e-11,75;UBERON:0010314,2.06e-10,92;UBERON:0000956,2.90e-10,21;UBERON:0001869,2.90e-10,21;UBERON:0000203,2.90e-10,21;UBERON:0002619,1.47e-07,17;UBERON:0002021,5.23e-07,10;UBERON:0000411,5.23e-07,10;UBERON:0001950,5.23e-07,10
|phase1_expression=34.9124486688451,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0.137114433605739,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0.878744730937887,0.388859798148567,0.699932108126813,5.75010257459886,0,0,0,0,1.71920063963254,0,21.0409119293982,21.1596391708813,24.719424736741,0.338844532069132,2.66788438833342,0.449949858640699,0,0,1.19840044207362,1.53687322128622,69.5757298589885,60.7526722492608,59.7322890237925,38.8485338789173,30.2589901103711,29.5202826108039,27.3159592401974,47.7993769037211,22.0231761998777,18.8977260366078,15.3606533256243,35.4774113994221,35.6801810049398,31.7757156039624,10.0505879640497,6.75315132038016,15.8910177687883,39.1856018679978,37.301380369365,22.5543329448614,0.37863096666592,0.68014404096107,0,0.860423876981386,0,0,0,0,3.93244376368905,0.852151612890289,0.519572009205738,1.06001872353102,20.8448261269487,5.13305909657271,10.1922095882658,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,1.7127581957859,0.517875767294343,1.7813056687779,9.02123699183906,2.74018930480927,3.68984795609694,3.16517545160507,6.93773372100658,2.89033160058254,9.14621380617183,12.4355446951124,0.884610551949874,5.01477234836968,3.09178125844551,1.45462575940567,1.86391761218122,7.02673912827713,7.33063473847093,0.766371165625774,0,0,0,23.0677584683427,31.1100409916666,26.2617595915887,40.1534179644159,35.8001640262463,24.3112012134685,27.0942909323155,18.4329248569072,1.8661045591514,1.26361379216837,6.10281382070775,16.6554166992261,13.3343220571414,15.1252189036493,18.3859877759572,31.0926801121568,19.601399203582,21.1765897504987,19.6614561761652,13.7963515477019,34.0390944302075,32.3750068461666,17.3164628617784,17.2389294519871,11.8405736617537,15.0220959577799,40.8020246977911,0,0,0,5.17814431338755,5.15957331958412,4.68161359798639,8.52281048106757,5.3126342571799,1.85120535464854,1.86027155800326,1.07309360559848,1.28441876603886,0.658239399653922,0.656669856316381,0.162137619091711,0,0.439100230582101,0.268412837520744,30.9126224389267,38.3834204174731,0,0.264450566663544,27.5141843190452,29.9585306699966,17.3971072784826,15.1262643467507,12.4531704553127,9.89173255785308,0.949058123089023,5.43506550589236,4.27269854960458,4.17808591286417,3.8992817423824,0.898819408654221,1.08069024937347,0.597423819763102,8.53505554288868,13.481324487948,21.4144697778853,13.8482902934814,14.1585315632367,15.640287835541,6.89278254654404,1.62371162777562,1.09899109488962,0.863780147452604,0,3.00321190288969,2.16214894624523,1.12431056192427,0.405720242777006,0.241177159752417,1.01850340712568,0.287696137450811,0,0,1.43768206527355,1.86070473834252,0,0,0,0,0.369506380333209,23.6864264713106,12.87423313892,8.65699937453459,9.38760993154008,9.88286918906713,9.99783291721258,5.26860849216057,19.0738524368491,19.2674279994434,20.4102103881583,0.81931657357869,0.863424909329478,1.01254341007058,0,0,5.90117127622843,17.1080782708934,15.412856638828,11.7211686592203,2.95082901678016,3.7870639080656,0.94652465824877,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.790575555893047,64.5855846007832,23.8459343149891,23.3265940804104,34.8578093016653,13.3625799607754,3.98235415019888,27.1914312493579,21.1626489875326,8.11001842950362,8.56375489354241,9.22305443831782,4.9101375701962,6.18007340111759,5.34746067577082,1.8962205476149,1.05418608574999,1.03135543248187,14.6389030474129,24.1281866001956,12.9358683782754,19.5046701878749,21.4581682707151,14.8046118609719,16.7840001014163,14.3098526083862,0.23467170806371,1.0591603543191,0.441056796109924,38.9131556941893,16.1464426695906,34.438680133977,23.0388623926053,23.3080077637987,1.45740418314925,18.7279555030615,0.170870880797853,7.84270098260245,3.33350149265481,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0,0,7.90839983952838,13.8257237646257,8.7484326065659,7.94535524854981,6.11415178489297,5.66430254816247,6.61227645802687,2.35580347785627,0.259229946583586,1.24267862617385,0,24.2216804591246,16.5458490457098,23.1396914129417,28.2860013416231,29.0604535844138,31.4517399570621,18.6192270326849,5.34782656571125,0.966336483304024,0.576060012515731,1.26404448251271,13.1771389938607,9.0385642305048,4.15746633528944,4.833720783022,3.9736270956253,3.36547258655913,1.47689527174577,1.31256384932592,1.905170166375,1.31074040677893,1.26695244961678,0.577271049841977,0.701261413089414,6.80191150845634,0,0,0,6.37525660306228,3.75364950902364,11.9048555773722,27.2247841430414,0.501572104035363,23.7195773899168,31.302116082488,28.0718801585304,31.7928387335822,35.6242910280734,46.8344216381614,27.675922509504,36.0256962579376,28.0948293570207,37.278742446131,4.98179268404048,21.1483182902546,25.6100408631201,20.1778575166684,4.40187641518763,6.06683577885047,13.3348036680969,13.8043488350059,16.6877988987744,14.9091354940641,18.2505095920973,18.1081287730633,15.0762827026511,19.2715708738657,18.264479127885,21.9095097990214,19.7003354106254,15.2398284166327,22.2526386433786,15.4558866141117,16.1148548621145,15.0854435235437,12.637118067208,16.5694914960855,16.4691415726829,15.4844732441768,12.073246209603,19.4671586464004,16.2964936615034,14.0285567914435,17.5579826823778,18.7158516513571,14.7323175541088,17.5078630540142,20.0622875420387,21.9833308585392,12.6323068560521,13.5368764050428,12.6250299165437,9.04424818390014,5.79669589051054
|phase1_expression=34.9124486688451,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0.333109761815663,0.607425802169478,0,0,0.137114433605739,0,7.22867966284093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0.183546752161682,0,0.436050312760893,0.878744730937887,0.388859798148567,0.699932108126813,5.75010257459886,0,0,0,0,1.71920063963254,0,21.0409119293982,21.1596391708813,24.719424736741,0.338844532069132,2.66788438833342,0.449949858640699,0,0,1.19840044207362,1.53687322128622,69.5757298589885,60.7526722492608,59.7322890237925,38.8485338789173,30.2589901103711,29.5202826108039,27.3159592401974,47.7993769037211,22.0231761998777,18.8977260366078,15.3606533256243,35.4774113994221,35.6801810049398,31.7757156039624,10.0505879640497,6.75315132038016,15.8910177687883,39.1856018679978,37.301380369365,22.5543329448614,0.37863096666592,0.68014404096107,0,0.860423876981386,0,0,0,0,3.93244376368905,0.852151612890289,0.519572009205738,1.06001872353102,20.8448261269487,5.13305909657271,10.1922095882658,7.11066703153331,0.216491041011214,0.253359865475099,0.505524445014783,1.7127581957859,0.517875767294343,1.7813056687779,9.02123699183906,2.74018930480927,3.68984795609694,3.16517545160507,6.93773372100658,2.89033160058254,9.14621380617183,12.4355446951124,0.884610551949874,5.01477234836968,3.09178125844551,1.45462575940567,1.86391761218122,7.02673912827713,7.33063473847093,0.766371165625774,0,0,0,23.0677584683427,31.1100409916666,26.2617595915887,40.1534179644159,35.8001640262463,24.3112012134685,27.0942909323155,18.4329248569072,1.8661045591514,1.26361379216837,6.10281382070775,16.6554166992261,13.3343220571414,15.1252189036493,18.3859877759572,31.0926801121568,19.601399203582,21.1765897504987,19.6614561761652,13.7963515477019,34.0390944302075,32.3750068461666,17.3164628617784,17.2389294519871,11.8405736617537,15.0220959577799,40.8020246977911,0,0,0,5.17814431338755,5.15957331958412,4.68161359798639,8.52281048106757,5.3126342571799,1.85120535464854,1.86027155800326,1.07309360559848,1.28441876603886,0.658239399653922,0.656669856316381,0.162137619091711,0,0.439100230582101,0.268412837520744,30.9126224389267,38.3834204174731,0,0.264450566663544,27.5141843190452,29.9585306699966,17.3971072784826,15.1262643467507,12.4531704553127,9.89173255785308,0.949058123089023,5.43506550589236,4.27269854960458,4.17808591286417,3.8992817423824,0.898819408654221,1.08069024937347,0.597423819763102,8.53505554288868,13.481324487948,21.4144697778853,13.8482902934814,14.1585315632367,15.640287835541,6.89278254654404,1.62371162777562,1.09899109488962,0.863780147452604,0,3.00321190288969,2.16214894624523,1.12431056192427,0.405720242777006,0.241177159752417,1.01850340712568,0.287696137450811,0,0,1.43768206527355,1.86070473834252,0,0,0,0,0.369506380333209,23.6864264713106,12.87423313892,8.65699937453459,9.38760993154008,9.88286918906713,9.99783291721258,5.26860849216057,19.0738524368491,19.2674279994434,20.4102103881583,0.81931657357869,0.863424909329478,1.01254341007058,0,0,5.90117127622843,17.1080782708934,15.412856638828,11.7211686592203,2.95082901678016,3.7870639080656,0.94652465824877,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0.809621403349789,1.16902343164525,0.790575555893047,64.5855846007832,23.8459343149891,23.3265940804104,34.8578093016653,13.3625799607754,3.98235415019888,27.1914312493579,21.1626489875326,8.11001842950362,8.56375489354241,9.22305443831782,4.9101375701962,6.18007340111759,5.34746067577082,1.8962205476149,1.05418608574999,1.03135543248187,14.6389030474129,24.1281866001956,12.9358683782754,19.5046701878749,21.4581682707151,14.8046118609719,16.7840001014163,14.3098526083862,0.23467170806371,1.0591603543191,0.441056796109924,38.9131556941893,16.1464426695906,34.438680133977,23.0388623926053,23.3080077637987,1.45740418314925,18.7279555030615,0.170870880797853,7.84270098260245,3.33350149265481,0.565105371014073,0.136694227721025,0.228778173206523,0,0,0,0,7.90839983952838,13.8257237646257,8.7484326065659,7.94535524854981,6.11415178489297,5.66430254816247,6.61227645802687,2.35580347785627,0.259229946583586,1.24267862617385,0,24.2216804591246,16.5458490457098,23.1396914129417,28.2860013416231,29.0604535844138,31.4517399570621,18.6192270326849,5.34782656571125,0.966336483304024,0.576060012515731,1.26404448251271,13.1771389938607,9.0385642305048,4.15746633528944,4.833720783022,3.9736270956253,3.36547258655913,1.47689527174577,1.31256384932592,1.905170166375,1.31074040677893,1.26695244961678,0.577271049841977,0.701261413089414,6.80191150845634,0,0,0,6.37525660306228,3.75364950902364,11.9048555773722,27.2247841430414,0.501572104035363,23.7195773899168,31.302116082488,28.0718801585304,31.7928387335822,35.6242910280734,46.8344216381614,27.675922509504,36.0256962579376,28.0948293570207,37.278742446131,4.98179268404048,21.1483182902546,25.6100408631201,20.1778575166684,4.40187641518763,6.06683577885047,13.3348036680969,13.8043488350059,16.6877988987744,14.9091354940641,18.2505095920973,18.1081287730633,15.07628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|short_description=p1@Odz4
|short_description=p1@Odz4
}}
}}

Latest revision as of 00:16, 2 October 2015

Short description:p1@Odz4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Odz4_5end
Coexpression cluster:MCL_coexpression_mm9:1474
Association with transcript: 0bp_to_ENSMUST00000129445, ENSMUST00000138760_5end
EntrezGene:Odz4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Odz4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G734.91
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.23
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.72
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C321.04
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C724.72
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D569.58
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F560.75
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D959.73
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F138.85
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D530.26
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D229.52
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.32
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D647.80
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F318.90
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D715.36
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D435.48
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F435.68
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D831.78
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E410.05
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E56.75
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I615.89
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D639.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F637.30
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.55
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.68
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G620.84
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H15.13
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I810.19
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.71
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D71.78
adrenal gland, embryo E14.CNhs11038.406-44C59.02
adrenal gland, embryo E16.CNhs11004.1254-43D62.74
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F53.17
adrenal gland, neonate N00.CNhs11191.1311-23C16.94
adrenal gland, neonate N25.CNhs11223.1377-27I32.89
amnion, adult pregnant day17.5.CNhs10488.583-22A89.15
aorta, adult.CNhs10498.46-23H112.44
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F55.01
bone (os femoris), neonate N16.CNhs11225.1525-43A63.09
bone (os femoris), neonate N20.CNhs11195.1350-25C31.45
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A423.07
corpus striatum, adult.CNhs10487.19-21D831.11
corpus striatum, neonate N00.CNhs11226.630-43F126.26
cortex, adult.CNhs10473.12-14D540.15
cortex, neonate N30.CNhs11107.1392-42F235.80
diencephalon, adult.CNhs10482.20-12F224.31
diencephalon, neonate N30.CNhs11201.1388-42B227.09
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B118.43
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.87
epididymis, adult.CNhs10490.58-23B21.26
eyeball, adult.CNhs10484.31-12G46.10
eyeball, embryo E12.CNhs11016.345-16C616.66
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C915.13
eyeball, embryo E17.CNhs11023.1261-18D418.39
eyeball, neonate N00.CNhs11207.633-15C631.09
eyeball, neonate N01.CNhs11140.1532-43E719.60
eyeball, neonate N02.CNhs11205.1551-44G821.18
eyeball, neonate N16.CNhs11188.777-19A219.66
forelimb, embryo E11.CNhs10596.335-25E213.80
forelimb, embryo E12.CNhs10600.359-14H234.04
forelimb, embryo E13.CNhs10589.384-1E232.38
forelimb, embryo E14.CNhs10577.413-26A817.32
forelimb, embryo E15.CNhs11007.437-20E717.24
forelimb, embryo E17.CNhs10598.1517-43C411.84
forelimb, embryo E18.CNhs11008.1520-43B515.02
gonad, embryo E13.CNhs11044.1564-45I640.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E95.18
heart, embryo E12.CNhs11015.353-12F55.16
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C85.31
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E51.86
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.28
heart, neonate N03.CNhs11221.1349-25I20.66
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E830.91
hippocampus, neonate N00.CNhs11228.627-43G138.38
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I527.51
intestine, embryo E13.CNhs11010.381-16D529.96
intestine, embryo E15.CNhs10602.976-16D817.40
intestine, embryo E16.CNhs10585.463-22H415.13
intestine, embryo E17.CNhs10582.482-18D312.45
intestine, embryo E18.CNhs10526.1289-20F79.89
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E95.44
intestine, neonate N06.CNhs11102.688-20B84.27
intestine, neonate N07.CNhs11095.720-20F24.18
intestine, neonate N10.CNhs11098.755-23A53.90
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I98.54
kidney, embryo E15.CNhs10997.434-16F813.48
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C714.16
kidney, neonate N00.CNhs11214.646-21G715.64
kidney, neonate N10.CNhs11206.758-6D56.89
kidney, neonate N20.CNhs11113.832-19I11.62
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.86
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F83.00
liver, embryo E13.CNhs10524.378-3H62.16
liver, embryo E14.CNhs10594.409-16E11.12
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G223.69
lung, embryo E14.CNhs10604.404-26F812.87
lung, embryo E15.CNhs11020.432-17C58.66
lung, embryo E16.CNhs10998.458-17B69.39
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I610.00
lung, neonate N00.CNhs11224.640-42C65.27
lung, neonate N06.CNhs11212.683-20E519.07
lung, neonate N07.CNhs11111.715-19A319.27
lung, neonate N10.CNhs11219.750-23E620.41
lung, neonate N20.CNhs11109.822-18A40.82
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H217.11
medulla oblongata, adult.CNhs10477.17-12C215.41
medulla oblongata, neonate N30.CNhs11200.1396-42A311.72
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.79
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.17
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I964.59
ovary, adult.CNhs10507.91-2I723.85
ovary, embryo E18.CNhs11040.505-44H723.33
ovary, neonate N00.CNhs11217.1299-22I434.86
oviduct, adult pregnant day01.CNhs10500.988-6G613.36
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F427.19
pancreas, embryo E15.CNhs11042.1556-45F221.16
pancreas, embryo E16.CNhs11003.460-26E58.11
pancreas, embryo E17.CNhs10599.1558-45G38.56
pancreas, embryo E18.CNhs10580.1535-43I79.22
pancreas, neonate N00.CNhs11105.645-26G94.91
pancreas, neonate N01.CNhs11138.1531-43D76.18
pancreas, neonate N02.CNhs11139.1539-43D85.35
pancreas, neonate N16.CNhs11136.787-43B61.90
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G814.64
pituitary gland, embryo E12.CNhs11018.346-16E624.13
pituitary gland, embryo E13.CNhs11009.370-44C712.94
pituitary gland, embryo E14.CNhs11037.398-44A519.50
pituitary gland, embryo E15.CNhs10592.427-16B921.46
pituitary gland, embryo E16.CNhs11036.449-43F614.80
pituitary gland, embryo E17.CNhs11039.1265-44F516.78
pituitary gland, neonate N00.CNhs11190.1308-22E914.31
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C338.91
skin, neonate N00.CNhs11124.650-25G416.15
skin, neonate N03.CNhs11215.662-22H334.44
skin, neonate N06.CNhs11097.693-20I523.04
skin, neonate N10.CNhs11108.762-6C423.31
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C918.73
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C17.84
spleen, embryo E18.CNhs11011.1271-21F23.33
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E37.91
stomach, embryo E15.CNhs10603.1252-16G813.83
stomach, embryo E16.CNhs11022.459-17D48.75
stomach, embryo E17.CNhs11006.1035-18D57.95
stomach, embryo E18.CNhs10999.1286-20C66.11
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E42.36
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F524.22
testis, embryo E15.CNhs11034.443-27C516.55
testis, embryo E16.CNhs11033.470-26G523.14
testis, embryo E17.CNhs11029.486-18I528.29
testis, embryo E18.CNhs11027.503-18G529.06
testis, neonate N00.CNhs11189.1300-22B731.45
testis, neonate N07.CNhs11222.726-26I418.62
testis, neonate N10.CNhs11204.763-44D95.35
testis, neonate N20.CNhs11110.839-18H30.97
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I413.18
thymus, embryo E15.CNhs11005.430-45I29.04
thymus, embryo E16.CNhs11002.456-26C54.16
thymus, embryo E17.CNhs10581.478-18C14.83
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F83.37
thymus, neonate N03.CNhs11137.2104-43C71.48
thymus, neonate N06.CNhs11197.681-26C41.31
thymus, neonate N07.CNhs11211.713-19D31.91
thymus, neonate N10.CNhs11194.748-24E41.31
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.58
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B46.80
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F53.75
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D527.22
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A123.72
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A328.07
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D731.79
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A435.62
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A546.83
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A627.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A736.03
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A828.09
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I84.98
whole body, embryo E12.CNhs10587.857-27C921.15
whole body, embryo E13.CNhs10512.372-23H225.61
whole body, embryo E14.5.CNhs10578.420-27D220.18
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G513.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G513.80
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G516.69
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.91
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G518.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G518.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G519.27
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G518.26
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G521.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G519.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G522.25
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G515.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G516.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.64
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G516.57
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G516.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G515.48
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G519.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G516.30
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G514.03
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G518.72
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G514.73
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G517.51
whole body, embryo E17.5.CNhs10513.490-9F920.06
whole body, embryo E17.CNhs10517.475-3I521.98
whole body, embryo E18.CNhs10516.493-3B312.63
whole body, neonate N00.CNhs10525.657-19C213.54
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D19.04
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)3.42e-1123
neuroblast (sensu Vertebrata)3.42e-1123

Uber anatomy
Ontology termp-valuen
ecto-epithelium2.21e-2073
pre-chordal neural plate8.72e-1849
regional part of nervous system1.31e-1754
neural tube5.09e-1752
neural rod5.09e-1752
future spinal cord5.09e-1752
neural keel5.09e-1752
neurectoderm7.70e-1764
neural plate7.70e-1764
presumptive neural plate7.70e-1764
ectoderm-derived structure2.20e-1695
ectoderm2.20e-1695
presumptive ectoderm2.20e-1695
gray matter8.02e-1634
anterior neural tube9.59e-1640
regional part of forebrain2.55e-1539
forebrain2.55e-1539
future forebrain2.55e-1539
brain1.70e-1447
future brain1.70e-1447
regional part of brain8.05e-1446
brain grey matter7.44e-1329
regional part of telencephalon7.44e-1329
telencephalon7.44e-1329
central nervous system9.64e-1373
nervous system1.27e-1175
structure with developmental contribution from neural crest2.06e-1092
cerebral cortex2.90e-1021
cerebral hemisphere2.90e-1021
pallium2.90e-1021
regional part of cerebral cortex1.47e-0717
occipital lobe5.23e-0710
visual cortex5.23e-0710
neocortex5.23e-0710
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