FFCP PHASE1:Mm9::chr14:76814784..76814803,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21807 | |EntrezGene=21807 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=108 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z0V7 | |UniProt=D3Z0V7 | ||
|association_with_transcript=16bp_to_ENSMUST00000110888,uc007urh.1_5end | |association_with_transcript=16bp_to_ENSMUST00000110888,uc007urh.1_5end | ||
|cluster_id=chr14:76814784..76814803,+ | |||
|description=CAGE_peak_7_at_Tsc22d1_5end | |description=CAGE_peak_7_at_Tsc22d1_5end | ||
|id=chr14:76814784..76814803,+ | |id=chr14:76814784..76814803,+ | ||
|ontology_enrichment_celltype=CL:0000221!1.61e-14!44;CL:0000133!1.61e-14!44;CL:0002319!4.35e-14!43;CL:0000540!5.36e-11!33;CL:0000047!5.36e-11!33;CL:0000031!5.36e-11!33;CL:0000404!5.36e-11!33;CL:0000055!5.60e-11!50;CL:0000393!9.45e-09!39;CL:0000211!9.45e-09!39;CL:0000117!6.11e-08!23;CL:0000337!6.11e-08!23 | |ontology_enrichment_celltype=CL:0000221!1.61e-14!44;CL:0000133!1.61e-14!44;CL:0002319!4.35e-14!43;CL:0000540!5.36e-11!33;CL:0000047!5.36e-11!33;CL:0000031!5.36e-11!33;CL:0000404!5.36e-11!33;CL:0000055!5.60e-11!50;CL:0000393!9.45e-09!39;CL:0000211!9.45e-09!39;CL:0000117!6.11e-08!23;CL:0000337!6.11e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.61e-15,44;CL:0000133,1.61e-15,44;CL:0002319,5.10e-15,43;CL:0000540,4.14e-12,33;CL:0000047,4.14e-12,33;CL:0000031,4.14e-12,33;CL:0000404,4.14e-12,33;CL:0000393,3.36e-09,39;CL:0000211,3.36e-09,39;CL:0000117,1.62e-08,23;CL:0000337,1.62e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.56e-16!73;UBERON:0005743!4.56e-16!73;UBERON:0000073!1.31e-15!75;UBERON:0001016!1.31e-15!75;UBERON:0004121!1.43e-15!102;UBERON:0000924!1.43e-15!102;UBERON:0006601!1.43e-15!102;UBERON:0002346!7.89e-11!71;UBERON:0003075!7.89e-11!71;UBERON:0007284!7.89e-11!71;UBERON:0000033!9.02e-11!63;UBERON:0001049!3.13e-09!52;UBERON:0005068!3.13e-09!52;UBERON:0006241!3.13e-09!52;UBERON:0007135!3.13e-09!52;UBERON:0003056!3.88e-08!49;UBERON:0000955!9.10e-08!50;UBERON:0006238!9.10e-08!50;UBERON:0002616!1.96e-07!49;UBERON:0000153!3.04e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!4.56e-16!73;UBERON:0005743!4.56e-16!73;UBERON:0000073!1.31e-15!75;UBERON:0001016!1.31e-15!75;UBERON:0004121!1.43e-15!102;UBERON:0000924!1.43e-15!102;UBERON:0006601!1.43e-15!102;UBERON:0002346!7.89e-11!71;UBERON:0003075!7.89e-11!71;UBERON:0007284!7.89e-11!71;UBERON:0000033!9.02e-11!63;UBERON:0001049!3.13e-09!52;UBERON:0005068!3.13e-09!52;UBERON:0006241!3.13e-09!52;UBERON:0007135!3.13e-09!52;UBERON:0003056!3.88e-08!49;UBERON:0000955!9.10e-08!50;UBERON:0006238!9.10e-08!50;UBERON:0002616!1.96e-07!49;UBERON:0000153!3.04e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.01e-17,73;UBERON:0004121,1.19e-16,95;UBERON:0000924,1.19e-16,95;UBERON:0006601,1.19e-16,95;UBERON:0001016,1.36e-16,75;UBERON:0002346,4.02e-13,64;UBERON:0003075,4.02e-13,64;UBERON:0007284,4.02e-13,64;UBERON:0010371,1.61e-11,73;UBERON:0000073,1.42e-10,54;UBERON:0001049,4.64e-10,52;UBERON:0005068,4.64e-10,52;UBERON:0006241,4.64e-10,52;UBERON:0007135,4.64e-10,52;UBERON:0010314,2.98e-09,92;UBERON:0003056,7.01e-09,49;UBERON:0000955,1.86e-08,47;UBERON:0006238,1.86e-08,47;UBERON:0002616,4.59e-08,46;UBERON:0002780,7.56e-08,39;UBERON:0001890,7.56e-08,39;UBERON:0006240,7.56e-08,39;UBERON:0002020,1.68e-07,34;UBERON:0003080,2.22e-07,40;UBERON:0000489,9.62e-07,21 | |||
|phase1_expression=2.5623815536767,0.348975407639361,0.909998478779072,0,0,0,0.233612640595526,0.645616617207881,0.422366166455,0.468129052643987,0.171217968225505,0.319088635981346,0.171200729931206,0.262261207256992,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0.159992422793407,0.22940928106717,0,0,0.861884930743556,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0.101376931219515,0.550640256485045,2.34717403304412,8.50298109883741,5.93152693383074,5.05517737593137,2.2397827460058,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,2.06268836910977,4.65327859977075,4.7609188134483,2.53532561402472,1.0165335962074,1.77858959222228,0,0,0.7104801149461,4.19440154725767,4.99483796918021,6.22137673850866,4.99521971827255,5.67877395648731,3.14216082844184,3.53389665522582,5.02212276781312,3.06705507258356,6.43453150627015,3.30347642998166,0.638436690425939,1.0752457327937,4.3522474950964,4.57438218012048,1.04182674111352,0.558365998002762,0,0.61119299110724,5.00868595305235,2.42031857358475,3.35519002485541,0.530083353332288,0.831287161174641,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,0,2.67602497575693,1.28326477414318,0,0,0,0.253359865475099,0,0.68510327831436,0.517875767294343,0.742210695324124,1.21439728736295,0.608930956624282,0,0.60289056221049,1.05829836422134,0.125666591329675,1.48316980640624,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.63502717310392,1.8850203613211,0,0.359445373517761,0.599902730993408,0.127070227073065,0.299581278809645,1.37250180845588,4.02093926761166,1.21677024134594,1.02286182932132,1.24672826735736,1.1356888414743,3.25885964321012,1.11966273549084,0.505445516867349,0.841767423545896,3.12289063110489,1.83921683546778,3.42118046630164,2.41127708537144,3.19771546011241,1.5373646434182,0.937017245597288,1.81092359517311,2.58681591519411,2.45837904218165,3.87092473160687,1.7535658594206,0.556094498451196,1.74126083261083,1.23469281844766,1.19420560091096,0,0,0,3.31401236056803,0.938104239924385,1.08037236876609,2.60419209143731,1.18058539048442,0.771335564436891,0.232533944750408,1.87791380979733,0.700592054203017,0.16455984991348,0.492502392237286,0.486412857275134,0,0.219550115291051,0.671032093801859,1.89260953707715,4.73361216944708,0.330418782983798,0,2.34617075588757,1.85789337488351,1.80414445850931,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,0,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,1.70701110857774,1.71372768914593,2.25415471346161,1.83286195060783,3.10323979468201,3.36651935473529,2.33975187359752,2.06654207171443,2.35498091762062,2.71473760627961,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,2.27389694124582,2.28150967018836,2.03694102930226,1.40814148973101,2.1775813467436,1.90434912708811,2.92700471786698,0.945810864637146,1.10732344824387,1.59454768657487,0,0.345369963731791,0.578596234326046,1.50791283939272,0,0.491764273019036,0,0.321101179975584,0.937693492737625,0.491804836130026,0.504941854408746,2.83957397474631,5.0757036758563,2.15423397732799,1.19484398976276,1.33679204449436,2.54768877709949,2.42886421004937,1.75353514746787,3.55759000151871,2.57057053137446,2.41298144854057,1.24645922567079,2.76907830901079,2.8044920905331,0,0.971122544619926,0,0.188605079755898,0.885905678642318,1.22974059177571,1.03371317267288,0.727067458955011,0,0.316036757935816,0,0,0,3.24109969256358,2.71653235943784,3.00071849044229,2.83744373827638,3.0322698992352,2.96188237083818,3.34911444026059,2.81606049676452,1.0591603543191,0.220528398054962,0.8244312647074,2.26050197374268,0.603129249281559,0.596861720015682,0.328281799490123,0.291480836629851,0.927126510052548,0.170870880797853,2.27025554759545,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.138199973804424,0,2.53068794864908,1.01659733563424,1.51207477150522,1.46361807210128,0.87345025498471,0.539457385539283,0.991841468704031,0,0.259229946583586,0.621339313086926,0,1.64468200648377,0.827292452285488,0.583353565032143,1.03327858782185,0.675824501963113,1.64300134104056,1.8228613878153,1.57289016638566,0.724752362478018,0.288030006257865,0.316011120628178,1.82452693761148,0.821687657318618,1.81889152168913,0.358053391334963,0.993406773906324,0.600977247599844,0.590758108698309,0.504832249740738,0.457240839929999,0.302478555410522,0.487289403698762,0.673482891482306,0.467507608726276,4.53460767230423,0.443971906748129,1.07656627931371,0.335769232728157,1.9318959403219,0.375364950902364,1.28206136987086,1.07184189539533,1.00314420807073,2.82375921308533,1.38097570952153,0,1.3748254587495,0,1.5107877947794,0,1.35096360967266,0.906284817968409,0.51776031175182,3.42498247027783,5.1873233542134,2.21953687480374,1.45864030240976,1.67690530102386,2.20612210140017,0.888986911206461,2.06035057238894,1.28367683836726,1.26348605881899,1.52087579934144,1.69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|phase1_expression=2.5623815536767,0.348975407639361,0.909998478779072,0,0,0,0.233612640595526,0.645616617207881,0.422366166455,0.468129052643987,0.171217968225505,0.319088635981346,0.171200729931206,0.262261207256992,0,0,0,0,0.137114433605739,0,0.765389611359628,0,0,0.159992422793407,0.22940928106717,0,0,0.861884930743556,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0.101376931219515,0.550640256485045,2.34717403304412,8.50298109883741,5.93152693383074,5.05517737593137,2.2397827460058,1.43752564364972,0,0,0,0.771778308107841,0.573066879877513,2.06268836910977,4.65327859977075,4.7609188134483,2.53532561402472,1.0165335962074,1.77858959222228,0,0,0.7104801149461,4.19440154725767,4.99483796918021,6.22137673850866,4.99521971827255,5.67877395648731,3.14216082844184,3.53389665522582,5.02212276781312,3.06705507258356,6.43453150627015,3.30347642998166,0.638436690425939,1.0752457327937,4.3522474950964,4.57438218012048,1.04182674111352,0.558365998002762,0,0.61119299110724,5.00868595305235,2.42031857358475,3.35519002485541,0.530083353332288,0.831287161174641,0,0,0,0,0,0,0.280888840263504,1.02258193546835,0.779358013808606,0,2.67602497575693,1.28326477414318,0,0,0,0.253359865475099,0,0.68510327831436,0.517875767294343,0.742210695324124,1.21439728736295,0.608930956624282,0,0.60289056221049,1.05829836422134,0.125666591329675,1.48316980640624,0.289198713839823,0,0.485300549842228,0.220841518460394,0.484875253135222,0,2.63502717310392,1.8850203613211,0,0.359445373517761,0.599902730993408,0.127070227073065,0.299581278809645,1.37250180845588,4.02093926761166,1.21677024134594,1.02286182932132,1.24672826735736,1.1356888414743,3.25885964321012,1.11966273549084,0.505445516867349,0.841767423545896,3.12289063110489,1.83921683546778,3.42118046630164,2.41127708537144,3.19771546011241,1.5373646434182,0.937017245597288,1.81092359517311,2.58681591519411,2.45837904218165,3.87092473160687,1.7535658594206,0.556094498451196,1.74126083261083,1.23469281844766,1.19420560091096,0,0,0,3.31401236056803,0.938104239924385,1.08037236876609,2.60419209143731,1.18058539048442,0.771335564436891,0.232533944750408,1.87791380979733,0.700592054203017,0.16455984991348,0.492502392237286,0.486412857275134,0,0.219550115291051,0.671032093801859,1.89260953707715,4.73361216944708,0.330418782983798,0,2.34617075588757,1.85789337488351,1.80414445850931,1.00841762311671,0.667134131534611,0.760902504450237,0,0.823494773620054,0,0.596869416123452,0.38992817423824,0.898819408654221,0.216138049874694,0.597423819763102,1.70701110857774,1.71372768914593,2.25415471346161,1.83286195060783,3.10323979468201,3.36651935473529,2.33975187359752,2.06654207171443,2.35498091762062,2.71473760627961,0,0.333690211432188,0.589676985339609,0.224862112384854,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0.252578877947112,0,0,0.184753190166605,2.27389694124582,2.28150967018836,2.03694102930226,1.40814148973101,2.1775813467436,1.90434912708811,2.92700471786698,0.945810864637146,1.10732344824387,1.59454768657487,0,0.345369963731791,0.578596234326046,1.50791283939272,0,0.491764273019036,0,0.321101179975584,0.937693492737625,0.491804836130026,0.504941854408746,2.83957397474631,5.0757036758563,2.15423397732799,1.19484398976276,1.33679204449436,2.54768877709949,2.42886421004937,1.75353514746787,3.55759000151871,2.57057053137446,2.41298144854057,1.24645922567079,2.76907830901079,2.8044920905331,0,0.971122544619926,0,0.188605079755898,0.885905678642318,1.22974059177571,1.03371317267288,0.727067458955011,0,0.316036757935816,0,0,0,3.24109969256358,2.71653235943784,3.00071849044229,2.83744373827638,3.0322698992352,2.96188237083818,3.34911444026059,2.81606049676452,1.0591603543191,0.220528398054962,0.8244312647074,2.26050197374268,0.603129249281559,0.596861720015682,0.328281799490123,0.291480836629851,0.927126510052548,0.170870880797853,2.27025554759545,0.370389054739423,0.376736914009382,0,0,0.169978429993855,0,0.138199973804424,0,2.53068794864908,1.01659733563424,1.51207477150522,1.46361807210128,0.87345025498471,0.539457385539283,0.991841468704031,0,0.259229946583586,0.621339313086926,0,1.64468200648377,0.827292452285488,0.583353565032143,1.03327858782185,0.675824501963113,1.64300134104056,1.8228613878153,1.57289016638566,0.724752362478018,0.288030006257865,0.316011120628178,1.82452693761148,0.821687657318618,1.81889152168913,0.358053391334963,0.993406773906324,0.600977247599844,0.590758108698309,0.504832249740738,0.457240839929999,0.302478555410522,0.487289403698762,0.673482891482306,0.467507608726276,4.53460767230423,0.443971906748129,1.07656627931371,0.335769232728157,1.9318959403219,0.375364950902364,1.28206136987086,1.07184189539533,1.00314420807073,2.82375921308533,1.38097570952153,0,1.3748254587495,0,1.5107877947794,0,1.35096360967266,0.906284817968409,0.51776031175182,3.42498247027783,5.1873233542134,2.21953687480374,1.45864030240976,1.67690530102386,2.20612210140017,0.888986911206461,2.06035057238894,1.28367683836726,1.26348605881899,1.52087579934144,1.69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| ||
|short_description=p7@Tsc22d1 | |short_description=p7@Tsc22d1 | ||
}} | }} |
Latest revision as of 10:14, 26 September 2015
Short description: | p7@Tsc22d1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Tsc22d1_5end |
Coexpression cluster: | MCL_coexpression_mm9:108 |
Association with transcript: | 16bp_to_ENSMUST00000110888, uc007urh.1_5end |
EntrezGene: | Tsc22d1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.61e-15 | 44 |
neurectodermal cell | 1.61e-15 | 44 |
neural cell | 5.10e-15 | 43 |
neuron | 4.14e-12 | 33 |
neuronal stem cell | 4.14e-12 | 33 |
neuroblast | 4.14e-12 | 33 |
electrically signaling cell | 4.14e-12 | 33 |
electrically responsive cell | 3.36e-09 | 39 |
electrically active cell | 3.36e-09 | 39 |
CNS neuron (sensu Vertebrata) | 1.62e-08 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-08 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.01e-17 | 73 |
ectoderm-derived structure | 1.19e-16 | 95 |
ectoderm | 1.19e-16 | 95 |
presumptive ectoderm | 1.19e-16 | 95 |
nervous system | 1.36e-16 | 75 |
neurectoderm | 4.02e-13 | 64 |
neural plate | 4.02e-13 | 64 |
presumptive neural plate | 4.02e-13 | 64 |
ecto-epithelium | 1.61e-11 | 73 |
regional part of nervous system | 1.42e-10 | 54 |
neural tube | 4.64e-10 | 52 |
neural rod | 4.64e-10 | 52 |
future spinal cord | 4.64e-10 | 52 |
neural keel | 4.64e-10 | 52 |
structure with developmental contribution from neural crest | 2.98e-09 | 92 |
pre-chordal neural plate | 7.01e-09 | 49 |
brain | 1.86e-08 | 47 |
future brain | 1.86e-08 | 47 |
regional part of brain | 4.59e-08 | 46 |
regional part of forebrain | 7.56e-08 | 39 |
forebrain | 7.56e-08 | 39 |
future forebrain | 7.56e-08 | 39 |
gray matter | 1.68e-07 | 34 |
anterior neural tube | 2.22e-07 | 40 |
cavitated compound organ | 9.62e-07 | 21 |