FFCP PHASE1:Mm9::chr7:125587041..125587059,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=110058 | |EntrezGene=110058 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q920M7 | |UniProt=Q920M7 | ||
|association_with_transcript=6bp_to_ENSMUST00000081574,NM_138649,uc009jju.1_5end | |association_with_transcript=6bp_to_ENSMUST00000081574,NM_138649,uc009jju.1_5end | ||
|cluster_id=chr7:125587041..125587059,- | |||
|description=CAGE_peak_3_at_Syt17_5end | |description=CAGE_peak_3_at_Syt17_5end | ||
|id=chr7:125587041..125587059,- | |id=chr7:125587041..125587059,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.87e-16!73;UBERON:0005743!3.87e-16!73;UBERON:0000073!2.24e-15!75;UBERON:0001016!2.24e-15!75;UBERON:0002021!8.43e-14!10;UBERON:0000411!8.43e-14!10;UBERON:0001950!8.43e-14!10;UBERON:0000955!5.87e-13!50;UBERON:0006238!5.87e-13!50;UBERON:0004121!1.41e-12!102;UBERON:0000924!1.41e-12!102;UBERON:0006601!1.41e-12!102;UBERON:0002791!2.14e-12!29;UBERON:0003528!2.14e-12!29;UBERON:0001893!2.14e-12!29;UBERON:0002616!4.03e-12!49;UBERON:0002619!1.05e-11!17;UBERON:0003080!1.60e-11!40;UBERON:0002780!5.22e-11!39;UBERON:0001890!5.22e-11!39;UBERON:0006240!5.22e-11!39;UBERON:0002346!5.34e-11!71;UBERON:0003075!5.34e-11!71;UBERON:0007284!5.34e-11!71;UBERON:0002020!7.95e-11!34;UBERON:0000956!2.19e-10!21;UBERON:0001869!2.19e-10!21;UBERON:0000203!2.19e-10!21;UBERON:0001049!1.07e-09!52;UBERON:0005068!1.07e-09!52;UBERON:0006241!1.07e-09!52;UBERON:0007135!1.07e-09!52;UBERON:0000033!3.69e-09!63;UBERON:0003056!8.27e-09!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.06e-37,10;UBERON:0000411,1.06e-37,10;UBERON:0001950,1.06e-37,10;UBERON:0003528,2.57e-27,29;UBERON:0002791,2.57e-27,29;UBERON:0001893,2.57e-27,29;UBERON:0002619,2.85e-26,17;UBERON:0002780,1.82e-25,39;UBERON:0001890,1.82e-25,39;UBERON:0006240,1.82e-25,39;UBERON:0000956,4.12e-25,21;UBERON:0001869,4.12e-25,21;UBERON:0000203,4.12e-25,21;UBERON:0003080,9.42e-25,40;UBERON:0000955,3.15e-23,47;UBERON:0006238,3.15e-23,47;UBERON:0002020,6.84e-23,34;UBERON:0001017,1.97e-21,73;UBERON:0002616,4.07e-21,46;UBERON:0001016,9.19e-21,75;UBERON:0000073,7.85e-20,54;UBERON:0003056,1.24e-19,49;UBERON:0001049,2.56e-18,52;UBERON:0005068,2.56e-18,52;UBERON:0006241,2.56e-18,52;UBERON:0007135,2.56e-18,52;UBERON:0002346,3.73e-16,64;UBERON:0003075,3.73e-16,64;UBERON:0007284,3.73e-16,64;UBERON:0004121,1.29e-15,95;UBERON:0000924,1.29e-15,95;UBERON:0006601,1.29e-15,95;UBERON:0010371,9.40e-14,73;UBERON:0010314,3.21e-10,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,3.44755812830007,0.921639199537461,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,2.90316670775939,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,2.28750301409313,0,16.5133104182663,10.2286182932132,2.90903262383384,6.00292673350703,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,22.0804445992334,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.631016438832513,0,1.29254038639679,0.477937595905104,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,2.89189184779626,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,9.20650473014354,12.0308057822273,7.21783365843488,12.3314853558716,7.55393897389701,14.1754725048679,12.6089936902782,12.2348450425735,11.9084871702919,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12608225377674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191690942036473,0,0,3.44755812830007,0.921639199537461,0,0.0914876436024097,0,0.279182999001381,1.12552522006336,2.90316670775939,0.294628585473668,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.346970653532272,0.913396434936424,0.230615497256059,0.150722640552623,0.470354828542819,0,0,0.433798070759735,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,2.28750301409313,0,16.5133104182663,10.2286182932132,2.90903262383384,6.00292673350703,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0.32833492815819,0.162137619091711,0,0,0,22.0804445992334,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0.631016438832513,0,1.29254038639679,0.477937595905104,0.445597348164788,1.13230612315533,0,1.16902343164525,0.395287777946524,2.89189184779626,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0.26175594198403,0.129614973291793,0,0,0,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.03602948187307,9.20650473014354,12.0308057822273,7.21783365843488,12.3314853558716,7.55393897389701,14.1754725048679,12.6089936902782,12.2348450425735,11.9084871702919,0,0,0,0,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0,0.182927972872773,0,0,0,0,0,0,0.154936841185966,0,0.749431733813838,0.233931608445408,0,0,0,0.231867835620421 | ||
|short_description=p3@Syt17 | |short_description=p3@Syt17 | ||
}} | }} |
Latest revision as of 18:57, 25 September 2015
Short description: | p3@Syt17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Syt17_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 6bp_to_ENSMUST00000081574, NM_138649, uc009jju.1_5end |
EntrezGene: | Syt17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.06e-37 | 10 |
visual cortex | 1.06e-37 | 10 |
neocortex | 1.06e-37 | 10 |
brain grey matter | 2.57e-27 | 29 |
regional part of telencephalon | 2.57e-27 | 29 |
telencephalon | 2.57e-27 | 29 |
regional part of cerebral cortex | 2.85e-26 | 17 |
regional part of forebrain | 1.82e-25 | 39 |
forebrain | 1.82e-25 | 39 |
future forebrain | 1.82e-25 | 39 |
cerebral cortex | 4.12e-25 | 21 |
cerebral hemisphere | 4.12e-25 | 21 |
pallium | 4.12e-25 | 21 |
anterior neural tube | 9.42e-25 | 40 |
brain | 3.15e-23 | 47 |
future brain | 3.15e-23 | 47 |
gray matter | 6.84e-23 | 34 |
central nervous system | 1.97e-21 | 73 |
regional part of brain | 4.07e-21 | 46 |
nervous system | 9.19e-21 | 75 |
regional part of nervous system | 7.85e-20 | 54 |
pre-chordal neural plate | 1.24e-19 | 49 |
neural tube | 2.56e-18 | 52 |
neural rod | 2.56e-18 | 52 |
future spinal cord | 2.56e-18 | 52 |
neural keel | 2.56e-18 | 52 |
neurectoderm | 3.73e-16 | 64 |
neural plate | 3.73e-16 | 64 |
presumptive neural plate | 3.73e-16 | 64 |
ectoderm-derived structure | 1.29e-15 | 95 |
ectoderm | 1.29e-15 | 95 |
presumptive ectoderm | 1.29e-15 | 95 |
ecto-epithelium | 9.40e-14 | 73 |
structure with developmental contribution from neural crest | 3.21e-10 | 92 |