FFCP PHASE1:Mm9::chr15:99288189..99288208,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380969 | |EntrezGene=380969 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=398 | |||
|TSSclassifier=NA | |||
|UniProt=Q6GQX2 | |UniProt=Q6GQX2 | ||
|association_with_transcript=-10bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end | |association_with_transcript=-10bp_to_ENSMUST00000023747,NM_001001884,uc007xpn.1_5end | ||
|cluster_id=chr15:99288189..99288208,- | |||
|description=CAGE_peak_2_at_Nckap5l_5end | |description=CAGE_peak_2_at_Nckap5l_5end | ||
|id=chr15:99288189..99288208,- | |id=chr15:99288189..99288208,- | ||
|ontology_enrichment_celltype=CL:0000117!1.19e-07!23;CL:0000337!1.19e-07!23 | |ontology_enrichment_celltype=CL:0000117!1.19e-07!23;CL:0000337!1.19e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-07,23;CL:0000337,1.24e-07,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.28e-18!52;UBERON:0005068!2.28e-18!52;UBERON:0006241!2.28e-18!52;UBERON:0007135!2.28e-18!52;UBERON:0002346!2.61e-18!71;UBERON:0003075!2.61e-18!71;UBERON:0007284!2.61e-18!71;UBERON:0001017!9.51e-18!73;UBERON:0005743!9.51e-18!73;UBERON:0000073!4.68e-17!75;UBERON:0001016!4.68e-17!75;UBERON:0004121!1.04e-16!102;UBERON:0000924!1.04e-16!102;UBERON:0006601!1.04e-16!102;UBERON:0000955!5.62e-15!50;UBERON:0006238!5.62e-15!50;UBERON:0002616!5.79e-15!49;UBERON:0000033!3.00e-14!63;UBERON:0000153!4.91e-14!94;UBERON:0003056!5.30e-14!49;UBERON:0003080!4.96e-13!40;UBERON:0007811!5.89e-13!86;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002020!2.14e-12!34;UBERON:0002791!4.99e-10!29;UBERON:0003528!4.99e-10!29;UBERON:0001893!4.99e-10!29;UBERON:0000025!1.84e-09!114;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0004111!2.36e-07!122 | |ontology_enrichment_uberon=UBERON:0001049!2.28e-18!52;UBERON:0005068!2.28e-18!52;UBERON:0006241!2.28e-18!52;UBERON:0007135!2.28e-18!52;UBERON:0002346!2.61e-18!71;UBERON:0003075!2.61e-18!71;UBERON:0007284!2.61e-18!71;UBERON:0001017!9.51e-18!73;UBERON:0005743!9.51e-18!73;UBERON:0000073!4.68e-17!75;UBERON:0001016!4.68e-17!75;UBERON:0004121!1.04e-16!102;UBERON:0000924!1.04e-16!102;UBERON:0006601!1.04e-16!102;UBERON:0000955!5.62e-15!50;UBERON:0006238!5.62e-15!50;UBERON:0002616!5.79e-15!49;UBERON:0000033!3.00e-14!63;UBERON:0000153!4.91e-14!94;UBERON:0003056!5.30e-14!49;UBERON:0003080!4.96e-13!40;UBERON:0007811!5.89e-13!86;UBERON:0002780!1.45e-12!39;UBERON:0001890!1.45e-12!39;UBERON:0006240!1.45e-12!39;UBERON:0002020!2.14e-12!34;UBERON:0002791!4.99e-10!29;UBERON:0003528!4.99e-10!29;UBERON:0001893!4.99e-10!29;UBERON:0000025!1.84e-09!114;UBERON:0000956!2.29e-08!21;UBERON:0001869!2.29e-08!21;UBERON:0000203!2.29e-08!21;UBERON:0004111!2.36e-07!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.91e-18,52;UBERON:0005068,1.91e-18,52;UBERON:0006241,1.91e-18,52;UBERON:0007135,1.91e-18,52;UBERON:0002346,6.87e-18,64;UBERON:0003075,6.87e-18,64;UBERON:0007284,6.87e-18,64;UBERON:0000073,1.55e-17,54;UBERON:0001017,4.37e-17,73;UBERON:0001016,3.14e-16,75;UBERON:0010371,4.42e-16,73;UBERON:0010314,1.80e-15,92;UBERON:0004121,2.68e-15,95;UBERON:0000924,2.68e-15,95;UBERON:0006601,2.68e-15,95;UBERON:0000955,4.10e-15,47;UBERON:0006238,4.10e-15,47;UBERON:0002616,4.19e-15,46;UBERON:0003056,5.18e-14,49;UBERON:0003080,4.10e-13,40;UBERON:0002780,1.28e-12,39;UBERON:0001890,1.28e-12,39;UBERON:0006240,1.28e-12,39;UBERON:0002020,2.12e-12,34;UBERON:0003528,6.74e-10,29;UBERON:0002791,6.74e-10,29;UBERON:0001893,6.74e-10,29;UBERON:0000025,3.72e-09,114;UBERON:0000956,3.12e-08,21;UBERON:0001869,3.12e-08,21;UBERON:0000203,3.12e-08,21;UBERON:0004111,2.72e-07,122 | |||
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| ||
|short_description=p2@Nckap5l | |short_description=p2@Nckap5l | ||
}} | }} |
Latest revision as of 13:55, 1 October 2015
Short description: | p2@Nckap5l |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nckap5l_5end |
Coexpression cluster: | MCL_coexpression_mm9:398 |
Association with transcript: | -10bp_to_ENSMUST00000023747, NM_001001884, uc007xpn.1_5end |
EntrezGene: | Nckap5l |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-07 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural tube | 1.91e-18 | 52 |
neural rod | 1.91e-18 | 52 |
future spinal cord | 1.91e-18 | 52 |
neural keel | 1.91e-18 | 52 |
neurectoderm | 6.87e-18 | 64 |
neural plate | 6.87e-18 | 64 |
presumptive neural plate | 6.87e-18 | 64 |
regional part of nervous system | 1.55e-17 | 54 |
central nervous system | 4.37e-17 | 73 |
nervous system | 3.14e-16 | 75 |
ecto-epithelium | 4.42e-16 | 73 |
structure with developmental contribution from neural crest | 1.80e-15 | 92 |
ectoderm-derived structure | 2.68e-15 | 95 |
ectoderm | 2.68e-15 | 95 |
presumptive ectoderm | 2.68e-15 | 95 |
brain | 4.10e-15 | 47 |
future brain | 4.10e-15 | 47 |
regional part of brain | 4.19e-15 | 46 |
pre-chordal neural plate | 5.18e-14 | 49 |
anterior neural tube | 4.10e-13 | 40 |
regional part of forebrain | 1.28e-12 | 39 |
forebrain | 1.28e-12 | 39 |
future forebrain | 1.28e-12 | 39 |
gray matter | 2.12e-12 | 34 |
brain grey matter | 6.74e-10 | 29 |
regional part of telencephalon | 6.74e-10 | 29 |
telencephalon | 6.74e-10 | 29 |
tube | 3.72e-09 | 114 |
cerebral cortex | 3.12e-08 | 21 |
cerebral hemisphere | 3.12e-08 | 21 |
pallium | 3.12e-08 | 21 |
anatomical conduit | 2.72e-07 | 122 |