FFCP PHASE1:Mm9::chr6:113884673..113884689,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11941 | |EntrezGene=11941 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=37 | |||
|TSSclassifier=NA | |||
|UniProt=F8WHB1 | |UniProt=F8WHB1 | ||
|association_with_transcript=0bp_to_ENSMUST00000101044,uc009dho.1_5end | |association_with_transcript=0bp_to_ENSMUST00000101044,uc009dho.1_5end | ||
|cluster_id=chr6:113884673..113884689,- | |||
|description=CAGE_peak_5_at_Atp2b2_5end | |description=CAGE_peak_5_at_Atp2b2_5end | ||
|id=chr6:113884673..113884689,- | |id=chr6:113884673..113884689,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!9.81e-15!10;UBERON:0000411!9.81e-15!10;UBERON:0001950!9.81e-15!10;UBERON:0000955!3.49e-11!50;UBERON:0006238!3.49e-11!50;UBERON:0002619!3.82e-10!17;UBERON:0002616!4.72e-10!49;UBERON:0000956!8.12e-10!21;UBERON:0001869!8.12e-10!21;UBERON:0000203!8.12e-10!21;UBERON:0002791!1.15e-09!29;UBERON:0003528!1.15e-09!29;UBERON:0001893!1.15e-09!29;UBERON:0002780!3.36e-09!39;UBERON:0001890!3.36e-09!39;UBERON:0006240!3.36e-09!39;UBERON:0003080!6.90e-09!40;UBERON:0007023!2.13e-08!51;UBERON:0001049!4.01e-08!52;UBERON:0005068!4.01e-08!52;UBERON:0006241!4.01e-08!52;UBERON:0007135!4.01e-08!52;UBERON:0000033!5.42e-08!63;UBERON:0002020!7.60e-08!34;UBERON:0000025!1.18e-07!114;UBERON:0003100!5.89e-07!11;UBERON:0004111!9.14e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.97e-21,10;UBERON:0000411,1.97e-21,10;UBERON:0001950,1.97e-21,10;UBERON:0002780,3.58e-14,39;UBERON:0001890,3.58e-14,39;UBERON:0006240,3.58e-14,39;UBERON:0000955,5.59e-14,47;UBERON:0006238,5.59e-14,47;UBERON:0003080,8.67e-14,40;UBERON:0000956,1.79e-13,21;UBERON:0001869,1.79e-13,21;UBERON:0000203,1.79e-13,21;UBERON:0003528,1.49e-12,29;UBERON:0002791,1.49e-12,29;UBERON:0001893,1.49e-12,29;UBERON:0002619,1.75e-12,17;UBERON:0002616,7.81e-12,46;UBERON:0003056,4.92e-11,49;UBERON:0002020,1.39e-10,34;UBERON:0007023,2.19e-10,51;UBERON:0001049,2.51e-10,52;UBERON:0005068,2.51e-10,52;UBERON:0006241,2.51e-10,52;UBERON:0007135,2.51e-10,52;UBERON:0000073,6.73e-10,54;UBERON:0010371,1.26e-08,73;UBERON:0001017,1.66e-08,73;UBERON:0001016,3.05e-08,75;UBERON:0002346,3.73e-08,64;UBERON:0003075,3.73e-08,64;UBERON:0007284,3.73e-08,64;UBERON:0004121,1.41e-07,95;UBERON:0000924,1.41e-07,95;UBERON:0006601,1.41e-07,95;UBERON:0001851,3.20e-07,1;UBERON:0005889,3.20e-07,1;UBERON:0000993,6.32e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,10.980014467647,0,4.17178368461463,4.34716277461562,2.49345653471472,3.0825839982874,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,34.4234991113325,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.567760340833074,0,0.162886959353576,2.3095817216155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0.171853182343688,6.85082519770642,7.55393897389701,3.37511250115903,5.40385443869065,4.53142408984205,5.69536342927002,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0.125666591329675,0,0.433798070759735,0,0,0.220841518460394,0,0,0.292780797011547,0,0,0,0,0,0,10.980014467647,0,4.17178368461463,4.34716277461562,2.49345653471472,3.0825839982874,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.268412837520744,0.630869845692382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29327233116623,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.578596234326046,0,0,34.4234991113325,0.551873492609465,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0.567760340833074,0,0.162886959353576,2.3095817216155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36630324853453,0,0,0,0,0.572895513439397,0.171853182343688,6.85082519770642,7.55393897389701,3.37511250115903,5.40385443869065,4.53142408984205,5.69536342927002,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@Atp2b2 | |short_description=p5@Atp2b2 | ||
}} | }} |
Latest revision as of 11:43, 26 September 2015
Short description: | p5@Atp2b2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atp2b2_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | 0bp_to_ENSMUST00000101044, uc009dho.1_5end |
EntrezGene: | Atp2b2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.97e-21 | 10 |
visual cortex | 1.97e-21 | 10 |
neocortex | 1.97e-21 | 10 |
regional part of forebrain | 3.58e-14 | 39 |
forebrain | 3.58e-14 | 39 |
future forebrain | 3.58e-14 | 39 |
brain | 5.59e-14 | 47 |
future brain | 5.59e-14 | 47 |
anterior neural tube | 8.67e-14 | 40 |
cerebral cortex | 1.79e-13 | 21 |
cerebral hemisphere | 1.79e-13 | 21 |
pallium | 1.79e-13 | 21 |
brain grey matter | 1.49e-12 | 29 |
regional part of telencephalon | 1.49e-12 | 29 |
telencephalon | 1.49e-12 | 29 |
regional part of cerebral cortex | 1.75e-12 | 17 |
regional part of brain | 7.81e-12 | 46 |
pre-chordal neural plate | 4.92e-11 | 49 |
gray matter | 1.39e-10 | 34 |
adult organism | 2.19e-10 | 51 |
neural tube | 2.51e-10 | 52 |
neural rod | 2.51e-10 | 52 |
future spinal cord | 2.51e-10 | 52 |
neural keel | 2.51e-10 | 52 |
regional part of nervous system | 6.73e-10 | 54 |
ecto-epithelium | 1.26e-08 | 73 |
central nervous system | 1.66e-08 | 73 |
nervous system | 3.05e-08 | 75 |
neurectoderm | 3.73e-08 | 64 |
neural plate | 3.73e-08 | 64 |
presumptive neural plate | 3.73e-08 | 64 |
ectoderm-derived structure | 1.41e-07 | 95 |
ectoderm | 1.41e-07 | 95 |
presumptive ectoderm | 1.41e-07 | 95 |
cortex | 3.20e-07 | 1 |
zygote cortex | 3.20e-07 | 1 |
oviduct | 6.32e-07 | 1 |